RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 UBE2SQ16763 222 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 MSL1Q68DK7 614 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 CYB5D1Q6P9G0 228 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 MCM8Q9UJA3 840 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 UFL1O94874 794 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 BAG3O95817 575 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 FAM107AO95990 144 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 SRGNP10124 158 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 TRADDQ15628 312 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 PREPLQ4J6C6 727 aaPredicted RBP21.59■■□□□ 1.05
TRIM58-201ENST00000366481 ARFGAP2Q8N6H7 521 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 SEMA6BQ9H3T3 888 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 SH2D4AQ9H788 454 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 SEC63Q9UGP8 760 aaKnown RBP21.59■■□□□ 1.05
TRIM58-201ENST00000366481 PACSIN2Q9UNF0 486 aaPredicted RBP21.59■■□□□ 1.05
TRIM58-201ENST00000366481 FLT1P17948 1338 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 SPATA31A5Q5VU36 1347 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 SPATA31A7Q8IWB4 1347 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 SLC37A4O43826 429 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 TNNI2P48788 182 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 NOX5Q96PH1 765 aa21.59■■□□□ 1.05
TRIM58-201ENST00000366481 PYM1Q9BRP8 204 aaKnown RBP21.59■■□□□ 1.05
TRIM58-201ENST00000366481 PDS5AQ29RF7 1337 aaKnown RBP21.59■■□□□ 1.05
TRIM58-201ENST00000366481 PALM3A6NDB9 673 aaPredicted RBP21.58■■□□□ 1.05
TRIM58-201ENST00000366481 SPTY2D1Q68D10 685 aaPredicted RBP21.58■■□□□ 1.05
TRIM58-201ENST00000366481 UBLCP1Q8WVY7 318 aaPredicted RBP21.58■■□□□ 1.05
TRIM58-201ENST00000366481 MMTAG2Q9BU76 263 aaKnown RBP21.58■■□□□ 1.05
TRIM58-201ENST00000366481 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.58■■□□□ 1.05
TRIM58-201ENST00000366481 CDCA7Q9BWT1 371 aaPredicted RBP21.58■■□□□ 1.05
TRIM58-201ENST00000366481 RTCBQ9Y3I0 505 aaKnown RBP21.58■■□□□ 1.05
TRIM58-201ENST00000366481 PDE6BP35913 854 aa21.58■■□□□ 1.04
TRIM58-201ENST00000366481 SLC16A2P36021 539 aa21.58■■□□□ 1.04
TRIM58-201ENST00000366481 SLC10A5Q5PT55 438 aa21.58■■□□□ 1.04
TRIM58-201ENST00000366481 NEK8Q86SG6 692 aa21.58■■□□□ 1.04
TRIM58-201ENST00000366481 NYXQ9GZU5 481 aa21.58■■□□□ 1.04
TRIM58-201ENST00000366481 THAP9Q9H5L6 903 aa21.58■■□□□ 1.04
TRIM58-201ENST00000366481 RIMBP2O15034 1052 aa21.57■■□□□ 1.04
TRIM58-201ENST00000366481 MEA1Q16626 185 aa21.57■■□□□ 1.04
TRIM58-201ENST00000366481 PNMA8AQ86V59 439 aaPredicted RBP21.57■■□□□ 1.04
TRIM58-201ENST00000366481 NLRC4Q9NPP4 1024 aa21.57■■□□□ 1.04
TRIM58-201ENST00000366481 DDX20Q9UHI6 824 aaKnown RBP21.57■■□□□ 1.04
TRIM58-201ENST00000366481 GNAQP50148 359 aa21.57■■□□□ 1.04
TRIM58-201ENST00000366481 GFPT1Q06210 699 aaPredicted RBP21.57■■□□□ 1.04
TRIM58-201ENST00000366481 KCNK18Q7Z418 384 aa21.57■■□□□ 1.04
TRIM58-201ENST00000366481 CACNA2D3Q8IZS8 1091 aa21.57■■□□□ 1.04
TRIM58-201ENST00000366481 MYMKA6NI61 221 aa21.57■■□□□ 1.04
TRIM58-201ENST00000366481 CCNE1P24864 410 aa21.57■■□□□ 1.04
TRIM58-201ENST00000366481 RFC4P35249 363 aa21.57■■□□□ 1.04
TRIM58-201ENST00000366481 EHHADHQ08426 723 aa21.57■■□□□ 1.04
TRIM58-201ENST00000366481 PPP1R7Q15435 360 aa21.57■■□□□ 1.04
TRIM58-201ENST00000366481 CAVIN3Q969G5 261 aa21.57■■□□□ 1.04
TRIM58-201ENST00000366481 CDK5RAP3Q96JB5 506 aa21.57■■□□□ 1.04
TRIM58-201ENST00000366481 MXD3Q9BW11 206 aa21.57■■□□□ 1.04
TRIM58-201ENST00000366481 CCSER1Q9C0I3 900 aa21.57■■□□□ 1.04
TRIM58-201ENST00000366481 GMNCA6NCL1 334 aa21.56■■□□□ 1.04
TRIM58-201ENST00000366481 GCFC2P16383 781 aaKnown RBP21.56■■□□□ 1.04
TRIM58-201ENST00000366481 CTNNA1P35221 906 aaKnown RBP21.56■■□□□ 1.04
TRIM58-201ENST00000366481 MIIPQ5JXC2 388 aa21.56■■□□□ 1.04
TRIM58-201ENST00000366481 A1CFQ9NQ94 594 aaKnown RBP21.56■■□□□ 1.04
TRIM58-201ENST00000366481 GPSM2P81274 684 aa21.56■■□□□ 1.04
TRIM58-201ENST00000366481 MFSD14BQ5SR56 506 aa21.56■■□□□ 1.04
TRIM58-201ENST00000366481 FAM114A1Q8IWE2 563 aa21.56■■□□□ 1.04
TRIM58-201ENST00000366481 REXO1Q8N1G1 1221 aaKnown RBP21.56■■□□□ 1.04
TRIM58-201ENST00000366481 WDR66Q8TBY9 1149 aa21.56■■□□□ 1.04
TRIM58-201ENST00000366481 C6orf50Q9HD87 102 aa21.56■■□□□ 1.04
TRIM58-201ENST00000366481 ZNF219Q9P2Y4 722 aaPredicted RBP21.56■■□□□ 1.04
TRIM58-201ENST00000366481 IQCKQ8N0W5 287 aa21.55■■□□□ 1.04
TRIM58-201ENST00000366481 ZHX3Q9H4I2 956 aa21.55■■□□□ 1.04
TRIM58-201ENST00000366481 ARHGAP20Q9P2F6 1191 aa21.55■■□□□ 1.04
TRIM58-201ENST00000366481 HMGB1P1B2RPK0 211 aaPredicted RBP21.55■■□□□ 1.04
TRIM58-201ENST00000366481 OPLAHO14841 1288 aa21.55■■□□□ 1.04
TRIM58-201ENST00000366481 MARCH6O60337 910 aa21.55■■□□□ 1.04
TRIM58-201ENST00000366481 HIBCHQ6NVY1 386 aaPredicted RBP21.55■■□□□ 1.04
TRIM58-201ENST00000366481 RETREG2Q8NC44 543 aa21.55■■□□□ 1.04
TRIM58-201ENST00000366481 TRIM6Q9C030 488 aaPredicted RBP21.55■■□□□ 1.04
TRIM58-201ENST00000366481 SH3GLB2Q9NR46 395 aa21.55■■□□□ 1.04
TRIM58-201ENST00000366481 BUB1BO60566 1050 aaPredicted RBP21.55■■□□□ 1.04
TRIM58-201ENST00000366481 PEX19P40855 299 aa21.55■■□□□ 1.04
TRIM58-201ENST00000366481 SATB1Q01826 763 aa21.55■■□□□ 1.04
TRIM58-201ENST00000366481 KCNB1Q14721 858 aa21.55■■□□□ 1.04
TRIM58-201ENST00000366481 NELFCDQ8IXH7 590 aa21.55■■□□□ 1.04
TRIM58-201ENST00000366481 FUKQ8N0W3 1084 aa21.55■■□□□ 1.04
TRIM58-201ENST00000366481 TAF4BQ92750 862 aa21.55■■□□□ 1.04
TRIM58-201ENST00000366481 TPX2Q9ULW0 747 aaKnown RBP21.55■■□□□ 1.04
TRIM58-201ENST00000366481 NAIF1Q69YI7 327 aaPredicted RBP21.54■■□□□ 1.04
TRIM58-201ENST00000366481 TTBK2Q6IQ55 1244 aa21.54■■□□□ 1.04
TRIM58-201ENST00000366481 DNAAF5Q86Y56 855 aa21.54■■□□□ 1.04
TRIM58-201ENST00000366481 TCP11Q8WWU5 503 aa21.54■■□□□ 1.04
TRIM58-201ENST00000366481 CALML4Q96GE6 196 aa21.54■■□□□ 1.04
TRIM58-201ENST00000366481 RTFDC1Q9BY42 306 aaPredicted RBP21.54■■□□□ 1.04
TRIM58-201ENST00000366481 ZMYND12Q9H0C1 365 aa21.54■■□□□ 1.04
TRIM58-201ENST00000366481 ACTR5Q9H9F9 607 aaPredicted RBP21.54■■□□□ 1.04
TRIM58-201ENST00000366481 C6orf229H3BNL8 230 aa21.54■■□□□ 1.04
TRIM58-201ENST00000366481 RPS6KA4O75676 772 aa21.54■■□□□ 1.04
TRIM58-201ENST00000366481 CLTAP09496 248 aa21.54■■□□□ 1.04
TRIM58-201ENST00000366481 CASKIN2Q8WXE0 1202 aa21.54■■□□□ 1.04
TRIM58-201ENST00000366481 SGSM3Q96HU1 749 aa21.54■■□□□ 1.04
TRIM58-201ENST00000366481 RASSF9O75901 435 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 IFFO1Q0D2I5 559 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 GRB10Q13322 594 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms