RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 CYP2C8P10632 490 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 PDE6AP16499 860 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 KCNA6P17658 529 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 NAT1P18440 290 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 DNM2P50570 870 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 AFF3P51826 1226 aaKnown RBP4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 HTRA3P83110 453 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 GRIN1Q05586 938 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 TUSC3Q13454 348 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 VMACQ2NL98 169 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 ABHD17CQ6PCB6 329 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 STK32CQ86UX6 486 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 OSTM1Q86WC4 334 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 PHOSPHO1Q8TCT1 267 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 FNIP1Q8TF40 1166 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 TOE1Q96GM8 510 aaKnown RBP4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 GORASP1Q9BQQ3 440 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 YIPF4Q9BSR8 244 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 CD244Q9BZW8 370 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 FANCLQ9NW38 375 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 DSEQ9UL01 958 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 COQ6Q9Y2Z9 468 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 PMF1-BGLAPU3KQ54 211 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 MAFKO60675 156 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 LRG1P02750 347 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 AMY2AP04746 511 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 ZSCAN22P10073 491 aaPredicted RBP4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 AMY2BP19961 511 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 DLX2Q07687 328 aaPredicted RBP4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 GPR19Q15760 415 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 C21orf62-AS1Q17RA5 79 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 TKFCQ3LXA3 575 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 VWA3BQ502W6 1294 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 FNDC3BQ53EP0 1204 aaKnown RBP4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 TEPPQ6URK8 271 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 ARHGAP36Q6ZRI8 547 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 C16orf59Q7L2K0 433 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 NOP9Q86U38 636 aaKnown RBP4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 ZC3H18Q86VM9 953 aaKnown RBP4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 PTRH1Q86Y79 214 aaKnown RBP4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 HOMER1Q86YM7 354 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 TRIM48Q8IWZ4 208 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 ZSCAN18Q8TBC5 510 aaPredicted RBP4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 DTLQ9NZJ0 730 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 RBPJLQ9UBG7 517 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 WASF3Q9UPY6 502 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 CD2APQ9Y5K6 639 aa4.78□□□□□ -1.64
RNU4-48P-201ENST00000365559 ZNF561-AS1K7EIQ3 104 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 MAN2B1O00754 1011 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 KCNK3O14649 394 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 FFAR3O14843 346 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 DNAJC8O75937 253 aaPredicted RBP4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 KRT15P19012 456 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 SDSP20132 328 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 EPHA5P54756 1037 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 JAM2P57087 298 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 NKX3-2P78367 333 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 ST5P78524 1137 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 PABPC4Q13310 644 aaKnown RBP eCLIP4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 SMAD4Q13485 552 aaKnown RBP4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 TCERG1LQ5VWI1 586 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 GIMAP6Q6P9H5 292 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 KCTD1Q719H9 257 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 TMEM151BQ8IW70 566 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 ADGRG2Q8IZP9 1017 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 CISD2Q8N5K1 135 aaKnown RBP4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 TTLL11Q8NHH1 800 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 ZNF526Q8TF50 670 aaPredicted RBP4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 ZBTB8AQ96BR9 441 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 C11orf84Q9BUA3 381 aaPredicted RBP4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 SMURF1Q9HCE7 757 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 TBX22Q9Y458 520 aa4.77□□□□□ -1.65
RNU4-48P-201ENST00000365559 A0A1B0GTL3 188 aa4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 GSTA4O15217 222 aa4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 ITGA1P56199 1179 aa4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 LACTBP83111 547 aaPredicted RBP4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 FZD5Q13467 585 aa4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 ZNF460Q14592 562 aa4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 CRY1Q16526 586 aa4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 FAM47CQ5HY64 1035 aa4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 C16orf86Q6ZW13 317 aa4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 SAPCD2Q86UD0 394 aa4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 PROSER1Q86XN7 944 aa4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 NLGN1Q8N2Q7 840 aa4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 LINC00482Q8N8I6 264 aa4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 IGSF22Q8N9C0 903 aa4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 TP53I13Q8NBR0 393 aaPredicted RBP4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 APPBP2Q92624 585 aa4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 CELF4Q9BZC1 486 aaKnown RBP4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 PDGFDQ9GZP0 370 aaPredicted RBP4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 SPATA6Q9NWH7 488 aaPredicted RBP4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 SRPK3Q9UPE1 567 aa4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 TNPO3Q9Y5L0 923 aaKnown RBP4.76□□□□□ -1.65
RNU4-48P-201ENST00000365559 FAM90A27PA6NNH2 459 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 ACOT7O00154 380 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 CDC45O75419 566 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 RFPL3O75679 317 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 FAHP16930 419 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms