RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 KRT12Q99456 494 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 LSM14BQ9BX40 385 aaKnown RBP11.7□□□□□ -0.54
SMC3-201ENST00000361804 ADAMTS1Q9UHI8 967 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 IGKV6D-41A0A0C4DH26 115 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 BACH1O14867 736 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 PRPHP41219 470 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 CORO7P57737 925 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 MSL3Q8N5Y2 521 aaKnown RBP11.69□□□□□ -0.54
SMC3-201ENST00000361804 TBC1D16Q8TBP0 767 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 KAT2BQ92831 832 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 FAM107BQ9H098 131 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 CD209Q9NNX6 404 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 STIM2Q9P246 746 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 PPP1R11O60927 126 aaPredicted RBP11.69□□□□□ -0.54
SMC3-201ENST00000361804 SNAP25P60880 206 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 GUCY1A3Q02108 690 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 SF3A3Q12874 501 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMC3-201ENST00000361804 RAPGEF1Q13905 1077 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 MAN2A1Q16706 1144 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 DDX42Q86XP3 938 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMC3-201ENST00000361804 FAM114A1Q8IWE2 563 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 OR2W6PQ8NHA6 318 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 P2RX7Q99572 595 aaKnown RBP11.69□□□□□ -0.54
SMC3-201ENST00000361804 CAPS2Q9BXY5 557 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 CENPHQ9H3R5 247 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 HYOU1Q9Y4L1 999 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 A0A087X0T9 212 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 FAM228BP0C875 321 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 GNAQP50148 359 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 TUBB4BP68371 445 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 SLC20A2Q08357 652 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 CCDC40Q4G0X9 1142 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 FBXW10Q5XX13 1052 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 PDXDC1Q6P996 788 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 RETREG2Q8NC44 543 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 NOC3LQ8WTT2 800 aaKnown RBP11.69□□□□□ -0.54
SMC3-201ENST00000361804 MTMR9Q96QG7 549 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 NYXQ9GZU5 481 aa11.69□□□□□ -0.54
SMC3-201ENST00000361804 GPR75-ASB3A0A0A6YYF3 556 aa11.68□□□□□ -0.54
SMC3-201ENST00000361804 MMGT1Q8N4V1 131 aa11.68□□□□□ -0.54
SMC3-201ENST00000361804 FAM196BA6NMK8 535 aa11.68□□□□□ -0.54
SMC3-201ENST00000361804 HEXIM1O94992 359 aaKnown RBP11.68□□□□□ -0.54
SMC3-201ENST00000361804 TPTE2Q6XPS3 522 aa11.68□□□□□ -0.54
SMC3-201ENST00000361804 UNC13DQ70J99 1090 aa11.68□□□□□ -0.54
SMC3-201ENST00000361804 KCTD1Q719H9 257 aa11.68□□□□□ -0.54
SMC3-201ENST00000361804 ZFPM1Q8IX07 1006 aa11.68□□□□□ -0.54
SMC3-201ENST00000361804 MAGEA9P43362 315 aa11.68□□□□□ -0.54
SMC3-201ENST00000361804 COASYQ13057 564 aa11.68□□□□□ -0.54
SMC3-201ENST00000361804 ASTE1Q2TB18 679 aaPredicted RBP11.68□□□□□ -0.54
SMC3-201ENST00000361804 TTC31Q49AM3 519 aaPredicted RBP11.68□□□□□ -0.54
SMC3-201ENST00000361804 FAM83BQ5T0W9 1011 aa11.68□□□□□ -0.54
SMC3-201ENST00000361804 RAD54LQ92698 747 aa11.68□□□□□ -0.54
SMC3-201ENST00000361804 C10orf71Q711Q0 1435 aa11.68□□□□□ -0.54
SMC3-201ENST00000361804 A0A1W2PQJ5 194 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 POTEB3A0JP26 581 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 POTECB2RU33 542 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 USP17L15C9J2P7 530 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 USP17L13C9JLJ4 530 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 USP17L11C9JVI0 530 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 USP17L18D6R9N7 530 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 USP17L22D6RA61 530 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 USP17L17D6RBQ6 530 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 USP17L19D6RCP7 530 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 USP17L20D6RJB6 530 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 MEIS1O00470 390 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 PDHBP11177 359 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 AKR1B1P15121 316 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 CASP5P51878 434 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 SEC24CP53992 1094 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 JAG1P78504 1218 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 USP17L24Q0WX57 530 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 USP17L6PQ6QN14 398 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 POTEBQ6S5H4 581 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 AK8Q96MA6 479 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 LRRC4CQ9HCJ2 640 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 PLIN4Q96Q06 1357 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 ZNF233A6NK53 670 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 TUBBP07437 444 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 AMPD3Q01432 767 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 HAS1Q92839 578 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 ALS2CR12Q96Q35 445 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 SPZ1Q9BXG8 430 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 FAM169AQ9Y6X4 670 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 LAD1O00515 517 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 MARCH6O60337 910 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 GNA11P29992 359 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 ZNF662Q6ZS27 426 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 AMOTL1Q8IY63 956 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 CASKIN2Q8WXE0 1202 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 RPGRIP1Q96KN7 1286 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 AP1M1Q9BXS5 423 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 TSGA10Q9BZW7 698 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 ANKRD2Q9GZV1 360 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 TSPYL1Q9H0U9 437 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 BAG3O95817 575 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 MYL1P05976 194 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 TRAPPC3LQ5T215 181 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 DPP8Q6V1X1 898 aaPredicted RBP11.67□□□□□ -0.54
SMC3-201ENST00000361804 SIAH1Q8IUQ4 282 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms