RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 SCINQ9Y6U3 715 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 LMTK3Q96Q04 1460 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 SOS2Q07890 1332 aaPredicted RBP9.92□□□□□ -0.82
CALD1-201ENST00000361675 WDR17Q8IZU2 1322 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 AGPSO00116 658 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 FAM107AO95990 144 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 ABL1P00519 1130 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 CCT6AP40227 531 aaKnown RBP9.92□□□□□ -0.82
CALD1-201ENST00000361675 SYKP43405 635 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 GUCY2DQ02846 1103 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 PPARAQ07869 468 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 FAPQ12884 760 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 ERICH1Q86X53 443 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 KSR1Q8IVT5 923 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 SLC17A8Q8NDX2 589 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 JAKMIP2Q96AA8 810 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 SEC16BQ96JE7 1060 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 FANCFQ9NPI8 374 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 PCDHA7Q9UN72 937 aa9.92□□□□□ -0.82
CALD1-201ENST00000361675 TLDC2A0PJX2 215 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 GMNCA6NCL1 334 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 DDX58O95786 925 aaKnown RBP9.91□□□□□ -0.82
CALD1-201ENST00000361675 CXCR5P32302 372 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 HSD17B7P56937 341 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 EZH2Q15910 746 aaKnown RBP9.91□□□□□ -0.82
CALD1-201ENST00000361675 VPS52Q8N1B4 723 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 CNBD1Q8NA66 436 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 SCYL1Q96KG9 808 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 MRC1P22897 1456 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 PKD1L3Q7Z443 1732 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 COL5A2P05997 1499 aaPredicted RBP9.91□□□□□ -0.82
CALD1-201ENST00000361675 A0A0D9SFI3 127 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 HNRNPRO43390 633 aaKnown RBP9.91□□□□□ -0.82
CALD1-201ENST00000361675 ZNF16P17020 682 aaPredicted RBP9.91□□□□□ -0.82
CALD1-201ENST00000361675 MDH1P40925 334 aaKnown RBP9.91□□□□□ -0.82
CALD1-201ENST00000361675 TFCP2Q12800 502 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 SFSWAPQ12872 951 aaKnown RBP9.91□□□□□ -0.82
CALD1-201ENST00000361675 LBRQ14739 615 aaKnown RBP9.91□□□□□ -0.82
CALD1-201ENST00000361675 MYBPC3Q14896 1274 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 ANKRD1Q15327 319 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 TAF1CQ15572 869 aaPredicted RBP9.91□□□□□ -0.82
CALD1-201ENST00000361675 TTMPQ5BVD1 217 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 ACSBG1Q96GR2 724 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 CDHR1Q96JP9 859 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 AGAP3Q96P47 875 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 GSDMAQ96QA5 445 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 NDNQ99608 321 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 MMTAG2Q9BU76 263 aaKnown RBP9.91□□□□□ -0.82
CALD1-201ENST00000361675 DDX23Q9BUQ8 820 aaKnown RBP9.91□□□□□ -0.82
CALD1-201ENST00000361675 ZBTB3Q9H5J0 574 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 COL4A3BPQ9Y5P4 624 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 COL15A1P39059 1388 aa9.91□□□□□ -0.82
CALD1-201ENST00000361675 A0A087WZG4 1122 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 ALOX15P16050 662 aaPredicted RBP9.9□□□□□ -0.82
CALD1-201ENST00000361675 IGHMBP2P38935 993 aaKnown RBP9.9□□□□□ -0.82
CALD1-201ENST00000361675 IFNAR2P48551 515 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 BLMHQ13867 455 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 CCNI2Q6ZMN8 369 aaPredicted RBP9.9□□□□□ -0.82
CALD1-201ENST00000361675 ZIM3Q96PE6 472 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 VCX3BQ9H321 246 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 VCX3AQ9NNX9 186 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 SCOCQ9UIL1 159 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 STMND1H3BQB6 276 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 PRC1O43663 620 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 COBLO75128 1261 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 GLRX3O76003 335 aaKnown RBP9.9□□□□□ -0.82
CALD1-201ENST00000361675 VIL1P09327 827 aaKnown RBP9.9□□□□□ -0.82
CALD1-201ENST00000361675 RBL2Q08999 1139 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 CBX3Q13185 183 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 PDE1CQ14123 709 aaPredicted RBP9.9□□□□□ -0.82
CALD1-201ENST00000361675 TCEAL1Q15170 157 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 ZNF589Q86UQ0 364 aaPredicted RBP9.9□□□□□ -0.82
CALD1-201ENST00000361675 TC2NQ8N9U0 490 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 NELL1Q92832 810 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 MOV10L1Q9BXT6 1211 aaKnown RBP9.9□□□□□ -0.82
CALD1-201ENST00000361675 SAMD15Q9P1V8 674 aa9.9□□□□□ -0.82
CALD1-201ENST00000361675 DBNLQ9UJU6 430 aaKnown RBP9.9□□□□□ -0.82
CALD1-201ENST00000361675 ETS2P15036 469 aa9.9□□□□□ -0.83
CALD1-201ENST00000361675 CASP14P31944 242 aa9.9□□□□□ -0.83
CALD1-201ENST00000361675 RAD23BP54727 409 aa9.9□□□□□ -0.83
CALD1-201ENST00000361675 G3BP1Q13283 466 aaKnown RBP eCLIP9.9□□□□□ -0.838e-9■□□□□ 9.6
CALD1-201ENST00000361675 TTLL12Q14166 644 aaPredicted RBP9.9□□□□□ -0.83
CALD1-201ENST00000361675 RNF10Q8N5U6 811 aaKnown RBP9.9□□□□□ -0.83
CALD1-201ENST00000361675 XAGE2Q96GT9 111 aa9.9□□□□□ -0.83
CALD1-201ENST00000361675 ZNF594Q96JF6 807 aaPredicted RBP9.9□□□□□ -0.83
CALD1-201ENST00000361675 CLMNQ96JQ2 1002 aa9.9□□□□□ -0.83
CALD1-201ENST00000361675 NR1H4Q96RI1 486 aaPredicted RBP9.9□□□□□ -0.83
CALD1-201ENST00000361675 ABCG4Q9H172 646 aa9.9□□□□□ -0.83
CALD1-201ENST00000361675 SENP2Q9HC62 589 aa9.9□□□□□ -0.83
CALD1-201ENST00000361675 TTF2Q9UNY4 1162 aaKnown RBP9.9□□□□□ -0.83
CALD1-201ENST00000361675 LZTS1Q9Y250 596 aa9.9□□□□□ -0.83
CALD1-201ENST00000361675 STAT6P42226 847 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 TUBB2AQ13885 445 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 PARP10Q53GL7 1025 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 C8orf74Q6P047 294 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 SYNE4Q8N205 404 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 CCDC197Q8NCU1 140 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 TUBB2BQ9BVA1 445 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 FAM170AA1A519 330 aa9.89□□□□□ -0.83
CALD1-201ENST00000361675 XPOTO43592 962 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms