RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 HLTFQ14527 1009 aaKnown RBP eCLIP10.04□□□□□ -0.8
TOP1-201ENST00000361337 MEA1Q16626 185 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 TMTC3Q6ZXV5 915 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 GEMIN8Q9NWZ8 242 aaKnown RBP10.04□□□□□ -0.8
TOP1-201ENST00000361337 CHD4Q14839 1912 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 CDK5RAP2Q96SN8 1893 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 GOLGA6L10A0A0M3HER8 536 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 KRT86O43790 486 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 AKR1B1P15121 316 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 CEP85LQ5SZL2 805 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 TYW1BQ6NUM6 668 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 TTI2Q6NXR4 508 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 KSR1Q8IVT5 923 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 ZFPM1Q8IX07 1006 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 CEP95Q96GE4 821 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 TUBGCP2Q9BSJ2 902 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 CAPS2Q9BXY5 557 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 TMEM39BQ9GZU3 492 aa10.04□□□□□ -0.8
TOP1-201ENST00000361337 ESYT3A0FGR9 886 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 FAM170AA1A519 330 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 KRT14P02533 472 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 ZNF384Q8TF68 577 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 A0A087WUV0 522 aaPredicted RBP10.03□□□□□ -0.8
TOP1-201ENST00000361337 CPP00450 1065 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 CALM1P0DP23 149 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 CALM2P0DP24 149 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 CALM3P0DP25 149 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 FCER1AP12319 257 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 RNASE9P60153 205 aaKnown RBP10.03□□□□□ -0.8
TOP1-201ENST00000361337 CC2D2BQ6DHV5 1058 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 MS4A14Q96JA4 679 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 PURBQ96QR8 312 aaKnown RBP10.03□□□□□ -0.8
TOP1-201ENST00000361337 DISC1Q9NRI5 854 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 FAM184BQ9ULE4 1060 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 G3BP2Q9UN86 482 aaKnown RBP10.03□□□□□ -0.8
TOP1-201ENST00000361337 PPP1R12BO60237 982 aaPredicted RBP10.03□□□□□ -0.8
TOP1-201ENST00000361337 ONECUT3O60422 494 aaPredicted RBP10.03□□□□□ -0.8
TOP1-201ENST00000361337 MYBL1P10243 752 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 APBA1Q02410 837 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 TBC1D8BQ0IIM8 1120 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 TRADDQ15628 312 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 MIIPQ5JXC2 388 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 ANKRD40Q6AI12 368 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 CDC42EP5Q6NZY7 148 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 TMED8Q6PL24 325 aaPredicted RBP10.03□□□□□ -0.8
TOP1-201ENST00000361337 NSMFQ6X4W1 530 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 TMC4Q7Z404 712 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 RTKN2Q8IZC4 609 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 CSGALNACT2Q8N6G5 542 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 SPATA4Q8NEY3 305 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 BMP2KQ9NSY1 1161 aaPredicted RBP10.03□□□□□ -0.8
TOP1-201ENST00000361337 SNX12Q9UMY4 172 aa10.03□□□□□ -0.8
TOP1-201ENST00000361337 MYH6P13533 1939 aa10.02□□□□□ -0.8
TOP1-201ENST00000361337 A0A1W2PQC6 194 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 ENO4A6NNW6 628 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 EIF3HO15372 352 aaKnown RBP eCLIP10.02□□□□□ -0.81
TOP1-201ENST00000361337 FAM153BP0C7A2 387 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 TAL1P17542 331 aaPredicted RBP10.02□□□□□ -0.81
TOP1-201ENST00000361337 KRT83P78385 493 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 STK4Q13043 487 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 ABCB5Q2M3G0 1257 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 NBPF9Q3BBW0 867 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 FAM153CQ494X1 144 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 NLGN2Q8NFZ4 835 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 ARHGAP20Q9P2F6 1191 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 FAM153AQ9UHL3 310 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 KCNG1Q9UIX4 513 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 MYH2Q9UKX2 1941 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 RTL9Q8NET4 1388 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 USP17L5A8MUK1 530 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 DDX39AO00148 427 aaKnown RBP10.02□□□□□ -0.81
TOP1-201ENST00000361337 CHMP2AO43633 222 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 UBA7P41226 1012 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 CKAP4Q07065 602 aaKnown RBP10.02□□□□□ -0.81
TOP1-201ENST00000361337 INF2Q27J81 1249 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 NAIF1Q69YI7 327 aaPredicted RBP10.02□□□□□ -0.81
TOP1-201ENST00000361337 FAM43BQ6ZT52 329 aaPredicted RBP10.02□□□□□ -0.81
TOP1-201ENST00000361337 CCDC121Q6ZUS5 278 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 IFT81Q8WYA0 676 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 CAMKK2Q96RR4 588 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 RIOK1Q9BRS2 568 aaKnown RBP10.02□□□□□ -0.81
TOP1-201ENST00000361337 EXOC1Q9NV70 894 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 SCG2P13521 617 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 SHROOM1Q2M3G4 852 aaPredicted RBP10.02□□□□□ -0.81
TOP1-201ENST00000361337 HAUS3Q68CZ6 603 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 TTBK2Q6IQ55 1244 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 DLK2Q6UY11 383 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 CERS5Q8N5B7 392 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 AKT1S1Q96B36 256 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 CNOT6LQ96LI5 555 aaKnown RBP10.02□□□□□ -0.81
TOP1-201ENST00000361337 PIGSQ96S52 555 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 SH3GL2Q99962 352 aa10.02□□□□□ -0.81
TOP1-201ENST00000361337 PPANQ9NQ55 473 aaKnown RBP10.02□□□□□ -0.81
TOP1-201ENST00000361337 FAM207AQ9NSI2 230 aaPredicted RBP10.02□□□□□ -0.81
TOP1-201ENST00000361337 LAMB1P07942 1786 aa10.01□□□□□ -0.81
TOP1-201ENST00000361337 SMIM23A6NLE4 172 aa10.01□□□□□ -0.81
TOP1-201ENST00000361337 MYO1FO00160 1098 aa10.01□□□□□ -0.81
TOP1-201ENST00000361337 BMP15O95972 392 aa10.01□□□□□ -0.81
TOP1-201ENST00000361337 HNRNPH1P31943 449 aaKnown RBP10.01□□□□□ -0.81
TOP1-201ENST00000361337 TXKP42681 527 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms