RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 CCDC87Q9NVE4 849 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 MAP3K15Q6ZN16 1313 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 K7ENM7 598 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 STK10O94804 968 aaKnown RBP15.14■□□□□ 0.01
SMC5-201ENST00000361138 IGKV5-2P06315 115 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 PSMD6Q15008 389 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 USPL1Q5W0Q7 1092 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 ENGASEQ8NFI3 743 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 FAF1Q9UNN5 650 aaPredicted RBP15.14■□□□□ 0.01
SMC5-201ENST00000361138 DCTN3O75935 186 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 MYO1EQ12965 1108 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 AFAP1L2Q8N4X5 818 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 PNKPQ96T60 521 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 ZNF148Q9UQR1 794 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 PALLDQ8WX93 1383 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 ATP5HO75947 161 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 ARL1P40616 181 aaPredicted RBP15.13■□□□□ 0.01
SMC5-201ENST00000361138 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
SMC5-201ENST00000361138 DDB1Q16531 1140 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 ARMC2Q8NEN0 867 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 BTG4Q9NY30 223 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 RCN2Q14257 317 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 RASA3Q14644 834 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 KAZNQ674X7 775 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 PSMD14O00487 310 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 FAM178BQ8IXR5 827 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 RBM17Q96I25 401 aaKnown RBP15.13■□□□□ 0.01
SMC5-201ENST00000361138 CCT8L2Q96SF2 557 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 CENPKQ9BS16 269 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 SUGCTQ9HAC7 445 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 IRAK1P51617 712 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 DYNLL1P63167 89 aaKnown RBP15.13■□□□□ 0.01
SMC5-201ENST00000361138 BFSP1Q12934 665 aa15.13■□□□□ 0.01
SMC5-201ENST00000361138 CAPRIN2Q6IMN6 1127 aaKnown RBP15.13■□□□□ 0.01
SMC5-201ENST00000361138 ZNF609O15014 1411 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 PODXLO00592 558 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 BACH1O14867 736 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 MCAMP43121 646 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 CASC4Q6P4E1 433 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 ALKBH5Q6P6C2 394 aaKnown RBP15.12■□□□□ 0.01
SMC5-201ENST00000361138 PPM1KQ8N3J5 372 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.12■□□□□ 0.01
SMC5-201ENST00000361138 VTI1AQ96AJ9 217 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 LRIG3Q6UXM1 1119 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 SH2D3CQ8N5H7 860 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 KCNV2Q8TDN2 545 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 STRBPQ96SI9 672 aaKnown RBP15.12■□□□□ 0.01
SMC5-201ENST00000361138 MPHOSPH6Q99547 160 aaKnown RBP15.12■□□□□ 0.01
SMC5-201ENST00000361138 SH3GL3Q99963 347 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 GEMIN8Q9NWZ8 242 aaKnown RBP15.12■□□□□ 0.01
SMC5-201ENST00000361138 TRIM10Q9UDY6 481 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.12■□□□□ 0.01
SMC5-201ENST00000361138 ROBO2Q9HCK4 1378 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 GAS7O60861 476 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 GMNNO75496 209 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 MFAP3P55082 362 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 TMTC3Q6ZXV5 915 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 FAM186BQ8IYM0 893 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 IWS1Q96ST2 819 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 PITPNM3Q9BZ71 974 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 ZC3H12CQ9C0D7 883 aaKnown RBP15.12■□□□□ 0.01
SMC5-201ENST00000361138 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.12■□□□□ 0.01
SMC5-201ENST00000361138 EMILIN3Q9NT22 766 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 NCAPD2Q15021 1401 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 INO80Q9ULG1 1556 aaPredicted RBP15.12■□□□□ 0.01
SMC5-201ENST00000361138 SP4Q02446 784 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 CHP1Q99653 195 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 DDX23Q9BUQ8 820 aaKnown RBP15.12■□□□□ 0.01
SMC5-201ENST00000361138 TMEM51Q9NW97 253 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 SLAIN2Q9P270 581 aa15.12■□□□□ 0.01
SMC5-201ENST00000361138 ADD3Q9UEY8 706 aaKnown RBP15.12■□□□□ 0.01
SMC5-201ENST00000361138 AK9Q5TCS8 1911 aa15.11■□□□□ 0.01
SMC5-201ENST00000361138 H7C1W4 665 aa15.11■□□□□ 0.01
SMC5-201ENST00000361138 CYP4F22Q6NT55 531 aa15.11■□□□□ 0.01
SMC5-201ENST00000361138 UNC13DQ70J99 1090 aa15.11■□□□□ 0.01
SMC5-201ENST00000361138 ZNF653Q96CK0 615 aa15.11■□□□□ 0.01
SMC5-201ENST00000361138 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.11■□□□□ 0.016e-8■■□□□ 13.2
SMC5-201ENST00000361138 ACSL3O95573 720 aa15.11■□□□□ 0.01
SMC5-201ENST00000361138 LRRC47Q8N1G4 583 aaKnown RBP15.11■□□□□ 0.01
SMC5-201ENST00000361138 FAM167BQ9BTA0 163 aa15.11■□□□□ 0.01
SMC5-201ENST00000361138 MYO1FO00160 1098 aa15.11■□□□□ 0.01
SMC5-201ENST00000361138 MAPK4P31152 587 aa15.11■□□□□ 0.01
SMC5-201ENST00000361138 IRX1P78414 480 aaPredicted RBP15.11■□□□□ 0.01
SMC5-201ENST00000361138 MSH2P43246 934 aa15.11■□□□□ 0.01
SMC5-201ENST00000361138 FXR1P51114 621 aaKnown RBP eCLIP15.11■□□□□ 0.01
SMC5-201ENST00000361138 RCAN1P53805 252 aa15.11■□□□□ 0.01
SMC5-201ENST00000361138 NOA1Q8NC60 698 aaKnown RBP15.11■□□□□ 0.01
SMC5-201ENST00000361138 FBXL5Q9UKA1 691 aa15.11■□□□□ 0.01
SMC5-201ENST00000361138 SNX24Q9Y343 169 aa15.11■□□□□ 0.01
SMC5-201ENST00000361138 H3BQF6 201 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 PDHA1P08559 390 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 GCFC2P16383 781 aaKnown RBP15.1■□□□□ 0.01
SMC5-201ENST00000361138 GAP43P17677 238 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 PPP4R3CPQ6ZMV5 832 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 STAM2O75886 525 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 ARHGEF10LQ9HCE6 1279 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 C1orf112Q9NSG2 853 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 GGA1Q9UJY5 639 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 RTCBQ9Y3I0 505 aaKnown RBP15.1■□□□□ 0.01
SMC5-201ENST00000361138 TNNI1P19237 187 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms