RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 SAMSN1Q9NSI8 373 aaKnown RBP13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 TBK1Q9UHD2 729 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 GCFC2P16383 781 aaKnown RBP13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 CDC25AP30304 524 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 TRMT2AQ8IZ69 625 aaKnown RBP13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 GSDMAQ96QA5 445 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 PIGSQ96S52 555 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 YY1AP1Q9H869 796 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 SPATA31E1Q6ZUB1 1445 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 SOS2Q07890 1332 aaPredicted RBP13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 WDR46O15213 610 aaKnown RBP13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 PRKAB2O43741 272 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 EEF1GP26641 437 aaKnown RBP13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 PLTPP55058 493 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 RINT1Q6NUQ1 792 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 NSUN7Q8NE18 718 aaKnown RBP13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 SPTLC3Q9NUV7 552 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 SERPINB13Q9UIV8 391 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 FIS1Q9Y3D6 152 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 ABCA8O94911 1581 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 ABCC12Q96J65 1359 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 CCDC151A5D8V7 595 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 HNRNPDLO14979 420 aaKnown RBP13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 CHUKO15111 745 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 ZBTB24O43167 697 aaPredicted RBP13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 KRT3P12035 628 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 BMP3P12645 472 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 SKIP12755 728 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 SLC16A2P36021 539 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 GYS2P54840 703 aa13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 MRPS25P82663 173 aaKnown RBP13.23□□□□□ -0.29
CCDC144A-204ENST00000360524 NR2F2P24468 414 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 CCND2P30279 289 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 MCUQ8NE86 351 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 ADD3Q9UEY8 706 aaKnown RBP13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 SHROOM2Q13796 1616 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 DNAJC8O75937 253 aaPredicted RBP13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 LARGE1O95461 756 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 RANBP1P43487 201 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 LCA5Q86VQ0 697 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 SCYL3Q8IZE3 742 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 SKA2Q8WVK7 121 aaPredicted RBP13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 RPS6KC1Q96S38 1066 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 WDR11Q9BZH6 1224 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 KIF1BO60333 1816 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 BPIFB4P59827 614 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 CYP4F22Q6NT55 531 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 LRGUKQ96M69 825 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 NBPF3Q9H094 633 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 POLR3EQ9NVU0 708 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 SH2B2O14492 632 aaPredicted RBP13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 XPOTO43592 962 aaKnown RBP13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 INHBAP08476 426 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 PTK2Q05397 1052 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 TSTA3Q13630 321 aaPredicted RBP13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 FAM182BQ5T319 152 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 RETREG2Q8NC44 543 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 NT5C1BQ96P26 610 aa13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 PUS7LQ9H0K6 701 aaKnown RBP13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 MRPL46Q9H2W6 279 aaKnown RBP13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 CACYBPQ9HB71 228 aaKnown RBP13.22□□□□□ -0.29
CCDC144A-204ENST00000360524 GFPT2O94808 682 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 STAT2P52630 851 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 EPHB4P54760 987 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 IL9RQ01113 521 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 GRAPQ13588 217 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 SYDE2Q5VT97 1194 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 GRAPLQ8TC17 118 aaPredicted RBP13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 TBCKQ8TEA7 893 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 SLC7A3Q8WY07 619 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 P2RX5Q93086 422 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 ACCSQ96QU6 501 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 IFT122Q9HBG6 1241 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 AKT3Q9Y243 479 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 PPME1Q9Y570 386 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 A6NJR5 290 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 LMNB1P20700 586 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 PSMC2P35998 433 aaKnown RBP13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 KCNQ4P56696 695 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 ZNF653Q96CK0 615 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 DHTKD1Q96HY7 919 aaPredicted RBP13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 NHEJ1Q9H9Q4 299 aaPredicted RBP13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 MAPK4P31152 587 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 GARSP41250 739 aaKnown RBP13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 NR5A1Q13285 461 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 PIGBQ92521 554 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 ANKRD36BP1Q96IX9 119 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 AP1M1Q9BXS5 423 aa13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 NOP53Q9NZM5 478 aaKnown RBP13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 CDK12Q9NYV4 1490 aaPredicted RBP13.21□□□□□ -0.29
CCDC144A-204ENST00000360524 AFPP02771 609 aaKnown RBP13.21□□□□□ -0.3
CCDC144A-204ENST00000360524 IRAK4Q9NWZ3 460 aa13.21□□□□□ -0.3
CCDC144A-204ENST00000360524 SART1O43290 800 aaKnown RBP13.21□□□□□ -0.3
CCDC144A-204ENST00000360524 MAP3K7O43318 606 aa13.21□□□□□ -0.3
CCDC144A-204ENST00000360524 MMP1P03956 469 aa13.21□□□□□ -0.3
CCDC144A-204ENST00000360524 PTPN12Q05209 780 aaKnown RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms