RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 ASNSP08243 561 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 IFT88Q13099 833 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 SRGAP1Q7Z6B7 1085 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 PARP9Q8IXQ6 854 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 STAG1Q8WVM7 1258 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 GDAP1L1Q96MZ0 367 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 ZNF341Q9BYN7 854 aa10.85□□□□□ -0.67
SIN3A-201ENST00000360439 MCM7P33993 719 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 NT5C2P49902 561 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 LACTBP83111 547 aaPredicted RBP10.84□□□□□ -0.67
SIN3A-201ENST00000360439 SCARF1Q14162 830 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 RASA3Q14644 834 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 ZNF654Q8IZM8 581 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 KLC4Q9NSK0 619 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 SLIT3O75094 1523 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 HSF2BPO75031 334 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 DDNO94850 711 aaPredicted RBP10.84□□□□□ -0.67
SIN3A-201ENST00000360439 SLC10A5Q5PT55 438 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 TTC38Q5R3I4 469 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 ENGASEQ8NFI3 743 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 DTNBP1Q96EV8 351 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 KLRF2D3W0D1 207 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 CHMP2AO43633 222 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 TTLL1O95922 423 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 MMP1P03956 469 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 SFSWAPQ12872 951 aaKnown RBP10.84□□□□□ -0.67
SIN3A-201ENST00000360439 KCTD2Q14681 263 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 IFI16Q16666 785 aaKnown RBP10.84□□□□□ -0.67
SIN3A-201ENST00000360439 EPSTI1Q96J88 318 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 POLLQ9UGP5 575 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 SETD1AO15047 1707 aaKnown RBP10.84□□□□□ -0.67
SIN3A-201ENST00000360439 CCDC151A5D8V7 595 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 DDAH1O94760 285 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 DDHD2O94830 711 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 IFNAR1P17181 557 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 HOXA7P31268 230 aaPredicted RBP10.84□□□□□ -0.67
SIN3A-201ENST00000360439 CLCN2P51788 898 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 MAP3K7CLP57077 242 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 SKOR1P84550 965 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 KIF5AQ12840 1032 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 PSMD6Q15008 389 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 FAAH2Q6GMR7 532 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 BTN2A1Q7KYR7 527 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 CACNA2D4Q7Z3S7 1137 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 CPLX4Q7Z7G2 160 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 MAN1B1Q9UKM7 699 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 GINS2Q9Y248 185 aa10.84□□□□□ -0.67
SIN3A-201ENST00000360439 MYO1FO00160 1098 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 TROVE2P10155 538 aaKnown RBP eCLIP10.83□□□□□ -0.68
SIN3A-201ENST00000360439 RFX5P48382 616 aaPredicted RBP10.83□□□□□ -0.68
SIN3A-201ENST00000360439 TRAPPC10P48553 1259 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 KCTD1Q719H9 257 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 SPC25Q9HBM1 224 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 CDC23Q9UJX2 597 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 MAGEA8P43361 318 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 CAMKK2Q96RR4 588 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 RNF26Q9BY78 433 aaPredicted RBP10.83□□□□□ -0.68
SIN3A-201ENST00000360439 JADE2Q9NQC1 790 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 CCPG1Q9ULG6 757 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 FAF1Q9UNN5 650 aaPredicted RBP10.83□□□□□ -0.68
SIN3A-201ENST00000360439 MROH7-TTC4A0A0A0MT08 1334 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 TAF11Q15544 211 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 FAM71BQ8TC56 605 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 LZTS2Q9BRK4 669 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 PCDHA5Q9Y5H7 936 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 SRPRBQ9Y5M8 271 aaKnown RBP10.83□□□□□ -0.68
SIN3A-201ENST00000360439 CHD2O14647 1828 aaKnown RBP10.83□□□□□ -0.68
SIN3A-201ENST00000360439 NWD1Q149M9 1564 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 DDX39AO00148 427 aaKnown RBP10.83□□□□□ -0.68
SIN3A-201ENST00000360439 VEGFAP15692 232 aaPredicted RBP10.83□□□□□ -0.68
SIN3A-201ENST00000360439 CDK8P49336 464 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 ADCY7P51828 1080 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 RHBDL3P58872 404 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 ALX1Q15699 326 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 TSNAXIP1Q2TAA8 658 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 HSP90AA4PQ58FG1 418 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 STOX1Q6ZVD7 989 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 C3orf67Q6ZVT6 689 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 AGXT2Q9BYV1 514 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 MAGEF1Q9HAY2 307 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 MYOZ2Q9NPC6 264 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 BATF3Q9NR55 127 aa10.83□□□□□ -0.68
SIN3A-201ENST00000360439 PIK3C2AO00443 1686 aa10.82□□□□□ -0.68
SIN3A-201ENST00000360439 SPECC1L-ADORA2AF8WAN1 911 aa10.82□□□□□ -0.68
SIN3A-201ENST00000360439 LDHAP00338 332 aaKnown RBP10.82□□□□□ -0.68
SIN3A-201ENST00000360439 CYP2D6P10635 497 aa10.82□□□□□ -0.68
SIN3A-201ENST00000360439 KCNA2P16389 499 aa10.82□□□□□ -0.68
SIN3A-201ENST00000360439 ZNF157P51786 506 aaPredicted RBP10.82□□□□□ -0.68
SIN3A-201ENST00000360439 SLC8A3P57103 927 aa10.82□□□□□ -0.68
SIN3A-201ENST00000360439 POLR2FP61218 127 aaKnown RBP10.82□□□□□ -0.68
SIN3A-201ENST00000360439 ST3GAL1Q11201 340 aa10.82□□□□□ -0.68
SIN3A-201ENST00000360439 SPP2Q13103 211 aa10.82□□□□□ -0.68
SIN3A-201ENST00000360439 CCDC63Q8NA47 563 aa10.82□□□□□ -0.68
SIN3A-201ENST00000360439 TBCAO75347 108 aaKnown RBP10.82□□□□□ -0.68
SIN3A-201ENST00000360439 CELF2O95319 508 aaKnown RBP10.82□□□□□ -0.68
SIN3A-201ENST00000360439 ATP11AP98196 1134 aa10.82□□□□□ -0.68
SIN3A-201ENST00000360439 DTHD1Q6ZMT9 781 aa10.82□□□□□ -0.68
SIN3A-201ENST00000360439 TRIM50Q86XT4 487 aa10.82□□□□□ -0.68
SIN3A-201ENST00000360439 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.82□□□□□ -0.683e-6■■■■■ 50.8
SIN3A-201ENST00000360439 ZNF512BQ96KM6 892 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms