RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 AATFQ9NY61 560 aaKnown RBP eCLIP10□□□□□ -0.81
VPS13A-203ENST00000360280 FPGT-TNNI3KV9GXZ4 949 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 MROH5Q6ZUA9 1318 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 POLR3AO14802 1390 aaPredicted RBP10□□□□□ -0.81
VPS13A-203ENST00000360280 CNGA3Q16281 694 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 PTPROQ16827 1216 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 ZFP69BQ9UJL9 534 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 ACEP12821 1306 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 UHRF1BP1Q6BDS2 1440 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 ZNF263O14978 683 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 TMED10P49755 219 aaKnown RBP10□□□□□ -0.81
VPS13A-203ENST00000360280 UHMK1Q8TAS1 419 aaKnown RBP10□□□□□ -0.81
VPS13A-203ENST00000360280 YIPF3Q9GZM5 350 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 ARMT1Q9H993 441 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 DNAJC17Q9NVM6 304 aaKnown RBP10□□□□□ -0.81
VPS13A-203ENST00000360280 PARD3Q8TEW0 1356 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 CFAP73A6NFT4 308 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 HNRNPRO43390 633 aaKnown RBP10□□□□□ -0.81
VPS13A-203ENST00000360280 ORC4O43929 436 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 DNAJC6O75061 913 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 PTK2BQ14289 1009 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 NBPF20Q3BBV1 942 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 RGS9BPQ6ZS82 235 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 KIF9Q9HAQ2 790 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 SLC38A10Q9HBR0 1119 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 YTHDC2Q9H6S0 1430 aaKnown RBP10□□□□□ -0.81
VPS13A-203ENST00000360280 PYGMP11217 842 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 MECOMQ03112 1051 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 ZBTB40Q9NUA8 1239 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 DDX5P17844 614 aaKnown RBP10□□□□□ -0.81
VPS13A-203ENST00000360280 FAM193BQ96PV7 902 aaPredicted RBP10□□□□□ -0.81
VPS13A-203ENST00000360280 GCNT4Q9P109 453 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 DIS3Q9Y2L1 958 aaKnown RBP10□□□□□ -0.81
VPS13A-203ENST00000360280 HNRNPDLO14979 420 aaKnown RBP10□□□□□ -0.81
VPS13A-203ENST00000360280 MYL1P05976 194 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 SOX5P35711 763 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 ARMCX5Q6P1M9 558 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 SLC35F6Q8N357 371 aa10□□□□□ -0.81
VPS13A-203ENST00000360280 KBTBD3Q8NAB2 608 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 CFAP36Q96G28 342 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 TMEM245Q9H330 911 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 SERTAD1Q9UHV2 236 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 ABCA5Q8WWZ7 1642 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 H0Y3Z8 333 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 SYTL2Q9HCH5 934 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 SYNJ2BP-COX16A0A087WUM0 186 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 ARHGEF37A1IGU5 675 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 GOLGA8RI6L899 631 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 HSPA1AP0DMV8 641 aaKnown RBP9.99□□□□□ -0.81
VPS13A-203ENST00000360280 HSPA1BP0DMV9 641 aaKnown RBP9.99□□□□□ -0.81
VPS13A-203ENST00000360280 PYROXD1Q8WU10 500 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 TUBGCP2Q9BSJ2 902 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 COX16Q9P0S2 106 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 ARL13BQ3SXY8 428 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 NAA35Q5VZE5 725 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 HDDC2Q7Z4H3 204 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 GPIHBP1Q8IV16 184 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 AK8Q96MA6 479 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 RASA4BC9J798 803 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 RASA4O43374 803 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 NBNO60934 754 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 KRT38O76015 456 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 AARSP49588 968 aaKnown RBP eCLIP9.99□□□□□ -0.81
VPS13A-203ENST00000360280 BLVRAP53004 296 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 CASP8Q14790 479 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 SUGT1Q9Y2Z0 365 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 ATP10DQ9P241 1426 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 A0A0G2JND7 137 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 C4BPBP20851 252 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 CIITAP33076 1130 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 KRT33BQ14525 404 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 CATSPER3Q86XQ3 398 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 RAPGEF5Q92565 580 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 CAV1Q03135 178 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 PPP6R3Q5H9R7 873 aaPredicted RBP9.99□□□□□ -0.81
VPS13A-203ENST00000360280 SZRD1Q7Z422 152 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 TAGAPQ8N103 731 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 KDM5BQ9UGL1 1544 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 EXOC8Q8IYI6 725 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 ZNF555Q8NEP9 628 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 SMARCA1P28370 1054 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 BRIP1Q9BX63 1249 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 TMEM63CQ9P1W3 806 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 RNF103-CHMP3A0A140T963 221 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 MEIS1O00470 390 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 SMYD3Q9H7B4 428 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 PSTPIP2Q9H939 334 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 PSMC2P35998 433 aaKnown RBP9.99□□□□□ -0.81
VPS13A-203ENST00000360280 COPB1P53618 953 aaKnown RBP9.99□□□□□ -0.81
VPS13A-203ENST00000360280 DRP2Q13474 957 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 DSCC1Q9BVC3 393 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 PITPNM3Q9BZ71 974 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 WDR64B1ANS9 1081 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 NR2F2P24468 414 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 TMPRSS15P98073 1019 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 C2orf54Q08AI8 447 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 DHTKD1Q96HY7 919 aaPredicted RBP9.99□□□□□ -0.81
VPS13A-203ENST00000360280 CALN1Q9BXU9 219 aa9.99□□□□□ -0.81
VPS13A-203ENST00000360280 PAPOLAP51003 745 aaKnown RBP9.98□□□□□ -0.81
VPS13A-203ENST00000360280 PARP10Q53GL7 1025 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms