RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 DUSP9Q99956 384 aaKnown RBP16.41■□□□□ 0.22
UBAP1-202ENST00000359544 TAF1DQ9H5J8 278 aaPredicted RBP16.41■□□□□ 0.22
UBAP1-202ENST00000359544 BCCIPQ9P287 314 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBAP1-202ENST00000359544 SWAP70Q9UH65 585 aa16.41■□□□□ 0.22
UBAP1-202ENST00000359544 RIPOR2Q9Y4F9 1068 aa16.41■□□□□ 0.22
UBAP1-202ENST00000359544 MBD4O95243 580 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 CCNE1P24864 410 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 PPP2R2AP63151 447 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 GRIK3Q13003 919 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 SLMAPQ14BN4 828 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 CUL5Q93034 780 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 TATDN2Q93075 761 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 P2RX5Q93086 422 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 MS4A14Q96JA4 679 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 ZSCAN5CA6NGD5 496 aaPredicted RBP16.4■□□□□ 0.22
UBAP1-202ENST00000359544 BUB1BO60566 1050 aaPredicted RBP16.4■□□□□ 0.22
UBAP1-202ENST00000359544 PRDM1O75626 825 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 PCCAP05165 728 aaPredicted RBP16.4■□□□□ 0.22
UBAP1-202ENST00000359544 QPCTQ16769 361 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 SPRED3Q2MJR0 410 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 MIIPQ5JXC2 388 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 ARMC2Q8NEN0 867 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 CCT6BQ92526 530 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 CNKSR1Q969H4 720 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 KRT12Q99456 494 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 NOD2Q9HC29 1040 aa16.4■□□□□ 0.22
UBAP1-202ENST00000359544 FRMD3A2A2Y4 597 aa16.39■□□□□ 0.21
UBAP1-202ENST00000359544 MCM7P33993 719 aa16.39■□□□□ 0.21
UBAP1-202ENST00000359544 ELF3P78545 371 aaPredicted RBP16.39■□□□□ 0.21
UBAP1-202ENST00000359544 ICA1Q05084 483 aa16.39■□□□□ 0.21
UBAP1-202ENST00000359544 CUL1Q13616 776 aa16.39■□□□□ 0.21
UBAP1-202ENST00000359544 IL17AQ16552 155 aa16.39■□□□□ 0.21
UBAP1-202ENST00000359544 ODF2Q5BJF6 829 aa16.39■□□□□ 0.21
UBAP1-202ENST00000359544 ZNF526Q8TF50 670 aaPredicted RBP16.39■□□□□ 0.21
UBAP1-202ENST00000359544 ISCUQ9H1K1 167 aa16.39■□□□□ 0.21
UBAP1-202ENST00000359544 GSG1L2A8MUP6 293 aa16.39■□□□□ 0.21
UBAP1-202ENST00000359544 NFKBIEO00221 500 aa16.39■□□□□ 0.21
UBAP1-202ENST00000359544 KLRC4O43908 158 aa16.39■□□□□ 0.21
UBAP1-202ENST00000359544 ECM2O94769 699 aaPredicted RBP16.39■□□□□ 0.21
UBAP1-202ENST00000359544 RPSAP08865 295 aaKnown RBP16.39■□□□□ 0.21
UBAP1-202ENST00000359544 ARID4AP29374 1257 aaPredicted RBP16.39■□□□□ 0.21
UBAP1-202ENST00000359544 MTMR3Q13615 1198 aa16.39■□□□□ 0.21
UBAP1-202ENST00000359544 CPLX4Q7Z7G2 160 aa16.39■□□□□ 0.21
UBAP1-202ENST00000359544 CELF1Q92879 486 aaKnown RBP16.39■□□□□ 0.21
UBAP1-202ENST00000359544 EBF2Q9HAK2 575 aa16.39■□□□□ 0.21
UBAP1-202ENST00000359544 LUC7LQ9NQ29 371 aaKnown RBP16.39■□□□□ 0.21
UBAP1-202ENST00000359544 KCNG1Q9UIX4 513 aa16.39■□□□□ 0.21
UBAP1-202ENST00000359544 V9GY48 417 aaPredicted RBP16.39■□□□□ 0.21
UBAP1-202ENST00000359544 GSTA1P08263 222 aa16.38■□□□□ 0.21
UBAP1-202ENST00000359544 HSD17B3P37058 310 aa16.38■□□□□ 0.21
UBAP1-202ENST00000359544 FUT2Q10981 343 aa16.38■□□□□ 0.21
UBAP1-202ENST00000359544 MAP3K12Q12852 859 aa16.38■□□□□ 0.21
UBAP1-202ENST00000359544 RAPGEF5Q92565 580 aa16.38■□□□□ 0.21
UBAP1-202ENST00000359544 RBM17Q96I25 401 aaKnown RBP16.38■□□□□ 0.21
UBAP1-202ENST00000359544 PLA2G12BQ9BX93 195 aa16.38■□□□□ 0.21
UBAP1-202ENST00000359544 DLEC1Q9Y238 1755 aa16.38■□□□□ 0.21
UBAP1-202ENST00000359544 OPLAHO14841 1288 aa16.38■□□□□ 0.21
UBAP1-202ENST00000359544 PPP1R12BO60237 982 aaPredicted RBP16.38■□□□□ 0.21
UBAP1-202ENST00000359544 CTNNA1P35221 906 aaKnown RBP16.38■□□□□ 0.21
UBAP1-202ENST00000359544 BYSLQ13895 437 aaKnown RBP16.38■□□□□ 0.21
UBAP1-202ENST00000359544 HLTFQ14527 1009 aaKnown RBP eCLIP16.38■□□□□ 0.21
UBAP1-202ENST00000359544 NPY5RQ15761 445 aa16.38■□□□□ 0.21
UBAP1-202ENST00000359544 C7orf43Q8WVR3 580 aa16.38■□□□□ 0.21
UBAP1-202ENST00000359544 MTMR8Q96EF0 704 aa16.38■□□□□ 0.21
UBAP1-202ENST00000359544 ARMT1Q9H993 441 aa16.38■□□□□ 0.21
UBAP1-202ENST00000359544 TNKSO95271 1327 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 MYH10P35580 1976 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 H0YGN5 161 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 ORC4O43929 436 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 CSF1RP07333 972 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 MYBP10242 640 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 GCKP35557 465 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 RIPK1Q13546 671 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 SEC23AQ15436 765 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 PIK3AP1Q6ZUJ8 805 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 CCDC84Q86UT8 332 aaPredicted RBP16.37■□□□□ 0.21
UBAP1-202ENST00000359544 CNOT10Q9H9A5 744 aaKnown RBP16.37■□□□□ 0.21
UBAP1-202ENST00000359544 SPATS2LQ9NUQ6 558 aaKnown RBP16.37■□□□□ 0.21
UBAP1-202ENST00000359544 BAIAP2L1Q9UHR4 511 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 SALL4Q9UJQ4 1053 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 NFS1Q9Y697 457 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 LAMB2P55268 1798 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 SSU72P8A0A1W2PR75 194 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 PPIP5K2O43314 1243 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 CALM1P0DP23 149 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 CALM2P0DP24 149 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 CALM3P0DP25 149 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 ZNF844Q08AG5 666 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 CATIPQ7Z7H3 387 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 ANKS4BQ8N8V4 417 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 ESR2Q92731 530 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 MAGEF1Q9HAY2 307 aa16.37■□□□□ 0.21
UBAP1-202ENST00000359544 RAD51CO43502 376 aa16.36■□□□□ 0.21
UBAP1-202ENST00000359544 BUB1O43683 1085 aa16.36■□□□□ 0.21
UBAP1-202ENST00000359544 ATP2C2O75185 946 aa16.36■□□□□ 0.21
UBAP1-202ENST00000359544 TMOD1P28289 359 aa16.36■□□□□ 0.21
UBAP1-202ENST00000359544 ALDH1B1P30837 517 aa16.36■□□□□ 0.21
UBAP1-202ENST00000359544 HOXA10P31260 410 aaPredicted RBP16.36■□□□□ 0.21
UBAP1-202ENST00000359544 CCNHP51946 323 aaPredicted RBP16.36■□□□□ 0.21
UBAP1-202ENST00000359544 PPP1R7Q15435 360 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms