RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 SSBP05455 408 aaKnown RBP eCLIP16.55■□□□□ 0.24
GABPB1-202ENST00000359031 POLR2MP0CAP2 368 aa16.55■□□□□ 0.24
GABPB1-202ENST00000359031 CYP11B2P19099 503 aa16.55■□□□□ 0.24
GABPB1-202ENST00000359031 RPS12P25398 132 aaKnown RBP16.55■□□□□ 0.24
GABPB1-202ENST00000359031 RPA1P27694 616 aa16.55■□□□□ 0.24
GABPB1-202ENST00000359031 HOXA13P31271 388 aaPredicted RBP16.55■□□□□ 0.24
GABPB1-202ENST00000359031 ZNF76P36508 570 aa16.55■□□□□ 0.24
GABPB1-202ENST00000359031 STAT3P40763 770 aa16.55■□□□□ 0.24
GABPB1-202ENST00000359031 SLC12A3P55017 1021 aa16.55■□□□□ 0.24
GABPB1-202ENST00000359031 TBC1D8BQ0IIM8 1120 aa16.55■□□□□ 0.24
GABPB1-202ENST00000359031 MAN2A1Q16706 1144 aa16.55■□□□□ 0.24
GABPB1-202ENST00000359031 NCAPH2Q6IBW4 605 aa16.55■□□□□ 0.24
GABPB1-202ENST00000359031 LRRC55Q6ZSA7 311 aa16.55■□□□□ 0.24
GABPB1-202ENST00000359031 JDP2Q8WYK2 163 aa16.55■□□□□ 0.24
GABPB1-202ENST00000359031 TTYH3Q9C0H2 523 aa16.55■□□□□ 0.24
GABPB1-202ENST00000359031 GINM1Q9NU53 330 aa16.55■□□□□ 0.24
GABPB1-202ENST00000359031 VAV3Q9UKW4 847 aa16.55■□□□□ 0.24
GABPB1-202ENST00000359031 LOXHD1Q8IVV2 1947 aa16.54■□□□□ 0.24
GABPB1-202ENST00000359031 A0A1W2PQJ5 194 aa16.54■□□□□ 0.24
GABPB1-202ENST00000359031 RNF225M0QZC1 329 aaPredicted RBP16.54■□□□□ 0.24
GABPB1-202ENST00000359031 MSH4O15457 936 aa16.54■□□□□ 0.24
GABPB1-202ENST00000359031 TAL1P17542 331 aaPredicted RBP16.54■□□□□ 0.24
GABPB1-202ENST00000359031 ZNF280AP59817 542 aaPredicted RBP16.54■□□□□ 0.24
GABPB1-202ENST00000359031 TNFAIP1Q13829 316 aa16.54■□□□□ 0.24
GABPB1-202ENST00000359031 TSR1Q2NL82 804 aaKnown RBP16.54■□□□□ 0.24
GABPB1-202ENST00000359031 ZCWPW2Q504Y3 356 aa16.54■□□□□ 0.24
GABPB1-202ENST00000359031 CDAN1Q8IWY9 1227 aa16.54■□□□□ 0.24
GABPB1-202ENST00000359031 PDCL2Q8N4E4 241 aa16.54■□□□□ 0.24
GABPB1-202ENST00000359031 KIFC2Q96AC6 838 aa16.54■□□□□ 0.24
GABPB1-202ENST00000359031 POLR3CQ9BUI4 534 aaPredicted RBP16.54■□□□□ 0.24
GABPB1-202ENST00000359031 CGNQ9P2M7 1197 aaKnown RBP16.54■□□□□ 0.24
GABPB1-202ENST00000359031 PCNTO95613 3336 aa16.54■□□□□ 0.24
GABPB1-202ENST00000359031 IGLV3-22A0A075B6J6 115 aa16.53■□□□□ 0.24
GABPB1-202ENST00000359031 POTEFA5A3E0 1075 aa16.53■□□□□ 0.24
GABPB1-202ENST00000359031 FANCGO15287 622 aa16.53■□□□□ 0.24
GABPB1-202ENST00000359031 POTEIP0CG38 1075 aa16.53■□□□□ 0.24
GABPB1-202ENST00000359031 MEA1Q16626 185 aa16.53■□□□□ 0.24
GABPB1-202ENST00000359031 KIF4BQ2VIQ3 1234 aa16.53■□□□□ 0.24
GABPB1-202ENST00000359031 VWA3BQ502W6 1294 aa16.53■□□□□ 0.24
GABPB1-202ENST00000359031 CCDC174Q6PII3 467 aa16.53■□□□□ 0.24
GABPB1-202ENST00000359031 POTEGQ6S5H5 508 aa16.53■□□□□ 0.24
GABPB1-202ENST00000359031 POTEEQ6S8J3 1075 aa16.53■□□□□ 0.24
GABPB1-202ENST00000359031 MIGA2Q7L4E1 593 aa16.53■□□□□ 0.24
GABPB1-202ENST00000359031 CATSPER3Q86XQ3 398 aa16.53■□□□□ 0.24
GABPB1-202ENST00000359031 PCDHA2Q9Y5H9 948 aa16.53■□□□□ 0.24
GABPB1-202ENST00000359031 SMCHD1A6NHR9 2005 aa16.52■□□□□ 0.24
GABPB1-202ENST00000359031 KIF5CO60282 957 aa16.52■□□□□ 0.24
GABPB1-202ENST00000359031 URI1O94763 535 aaPredicted RBP16.52■□□□□ 0.24
GABPB1-202ENST00000359031 KRT18P05783 430 aaKnown RBP16.52■□□□□ 0.24
GABPB1-202ENST00000359031 TRIM21P19474 475 aaKnown RBP16.52■□□□□ 0.24
GABPB1-202ENST00000359031 ZBED6P86452 979 aa16.52■□□□□ 0.24
GABPB1-202ENST00000359031 NBPF9Q3BBW0 867 aa16.52■□□□□ 0.24
GABPB1-202ENST00000359031 SYT2Q8N9I0 419 aaPredicted RBP16.52■□□□□ 0.24
GABPB1-202ENST00000359031 CEP63Q96MT8 703 aa16.52■□□□□ 0.24
GABPB1-202ENST00000359031 WDR24Q96S15 920 aa16.52■□□□□ 0.24
GABPB1-202ENST00000359031 DEFB129Q9H1M3 183 aa16.52■□□□□ 0.24
GABPB1-202ENST00000359031 DNM3Q9UQ16 869 aa16.52■□□□□ 0.24
GABPB1-202ENST00000359031 RABGAP1Q9Y3P9 1069 aa16.52■□□□□ 0.24
GABPB1-202ENST00000359031 DOCK1Q14185 1865 aa16.52■□□□□ 0.24
GABPB1-202ENST00000359031 DDNO94850 711 aaPredicted RBP16.52■□□□□ 0.23
GABPB1-202ENST00000359031 CFBP00751 764 aa16.52■□□□□ 0.23
GABPB1-202ENST00000359031 SPATA31C1P0DKV0 1188 aa16.52■□□□□ 0.23
GABPB1-202ENST00000359031 FKBP3Q00688 224 aaKnown RBP16.52■□□□□ 0.23
GABPB1-202ENST00000359031 ARHGAP29Q52LW3 1261 aa16.52■□□□□ 0.23
GABPB1-202ENST00000359031 PPP4R3CPQ6ZMV5 832 aa16.52■□□□□ 0.23
GABPB1-202ENST00000359031 FEZ1Q99689 392 aa16.52■□□□□ 0.23
GABPB1-202ENST00000359031 ZNHIT6Q9NWK9 470 aaKnown RBP16.52■□□□□ 0.23
GABPB1-202ENST00000359031 MYO1AQ9UBC5 1043 aa16.52■□□□□ 0.23
GABPB1-202ENST00000359031 LTBP3Q9NS15 1303 aa16.51■□□□□ 0.23
GABPB1-202ENST00000359031 WDR46O15213 610 aaKnown RBP16.51■□□□□ 0.23
GABPB1-202ENST00000359031 GNA14O95837 355 aa16.51■□□□□ 0.23
GABPB1-202ENST00000359031 POTEJP0CG39 1038 aa16.51■□□□□ 0.23
GABPB1-202ENST00000359031 SETQ01105 290 aaPredicted RBP16.51■□□□□ 0.23
GABPB1-202ENST00000359031 RASA3Q14644 834 aa16.51■□□□□ 0.23
GABPB1-202ENST00000359031 LRRC41Q15345 812 aa16.51■□□□□ 0.23
GABPB1-202ENST00000359031 ZYXQ15942 572 aaKnown RBP16.51■□□□□ 0.23
GABPB1-202ENST00000359031 ZC3H3Q8IXZ2 948 aaKnown RBP16.51■□□□□ 0.23
GABPB1-202ENST00000359031 ACRBPQ8NEB7 543 aa16.51■□□□□ 0.23
GABPB1-202ENST00000359031 ZNF397Q8NF99 534 aaPredicted RBP16.51■□□□□ 0.23
GABPB1-202ENST00000359031 LPAR1Q92633 364 aa16.51■□□□□ 0.23
GABPB1-202ENST00000359031 PCMTD1Q96MG8 357 aaPredicted RBP16.51■□□□□ 0.23
GABPB1-202ENST00000359031 UIMC1Q96RL1 719 aa16.51■□□□□ 0.23
GABPB1-202ENST00000359031 NDST4Q9H3R1 872 aa16.51■□□□□ 0.23
GABPB1-202ENST00000359031 TUFT1Q9NNX1 390 aa16.51■□□□□ 0.23
GABPB1-202ENST00000359031 LZTFL1Q9NQ48 299 aa16.51■□□□□ 0.23
GABPB1-202ENST00000359031 IQCA1LA6NCM1 817 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 RASSF10A6NK89 507 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 PHF20L1A8MW92 1017 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 NDUFA10O95299 355 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 MAP3K9P80192 1104 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 CDK17Q00537 523 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 PPP2R5CQ13362 524 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 ARSHQ5FYA8 562 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 HERC4Q5GLZ8 1057 aaPredicted RBP16.5■□□□□ 0.23
GABPB1-202ENST00000359031 CCDC84Q86UT8 332 aaPredicted RBP16.5■□□□□ 0.23
GABPB1-202ENST00000359031 LDHDQ86WU2 507 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 GLIS3Q8NEA6 775 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 MNS1Q8NEH6 495 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 SLC5A5Q92911 643 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 EEF2KMTQ96G04 330 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms