RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 PPP4R3AQ6IN85 833 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 POTEGQ6S5H5 508 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 POTEEQ6S8J3 1075 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 NLGN1Q8N2Q7 840 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 DPH5Q9H2P9 285 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 ATP6V0A2Q9Y487 856 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 TFRCP02786 760 aaKnown RBP13.43□□□□□ -0.26
COL20A1-201ENST00000358894 HARSP12081 509 aaKnown RBP13.43□□□□□ -0.26
COL20A1-201ENST00000358894 PEX19P40855 299 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 NFRKBQ6P4R8 1299 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 CCDC155Q8N6L0 562 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 GIMAP8Q8ND71 665 aaPredicted RBP13.43□□□□□ -0.26
COL20A1-201ENST00000358894 PLVAPQ9BX97 442 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 DAGLAQ9Y4D2 1042 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 MYMKA6NI61 221 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 WNT7AO00755 349 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 CPLX4Q7Z7G2 160 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 MMS19Q96T76 1030 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 ITIH6Q6UXX5 1313 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 PVALEFA0A1B0GWK0 134 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 H2AFXP16104 143 aaPredicted RBP13.42□□□□□ -0.26
COL20A1-201ENST00000358894 MDM2Q00987 491 aaPredicted RBP13.42□□□□□ -0.26
COL20A1-201ENST00000358894 QRICH1Q2TAL8 776 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 USP37Q86T82 979 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 CCDC50Q8IVM0 306 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 PIGOQ8TEQ8 1089 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 EXOC4Q96A65 974 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 SH2D4AQ9H788 454 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 MTMR4Q9NYA4 1195 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 PI4KBQ9UBF8 816 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 UTP11Q9Y3A2 253 aaKnown RBP13.42□□□□□ -0.26
COL20A1-201ENST00000358894 SPATA31A5Q5VU36 1347 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 SPATA31A7Q8IWB4 1347 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 RGPD2P0DJD1 1756 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 LRRN2O75325 713 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 FOSP01100 380 aaPredicted RBP13.42□□□□□ -0.26
COL20A1-201ENST00000358894 POLR2MP0CAP2 368 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 BMP3P12645 472 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 CTNNA2P26232 953 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 PSMD2Q13200 908 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 PDXDC2PQ6P474 469 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 GUF1Q8N442 669 aaKnown RBP13.42□□□□□ -0.26
COL20A1-201ENST00000358894 TBC1D16Q8TBP0 767 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.42□□□□□ -0.26
COL20A1-201ENST00000358894 AFPP02771 609 aaKnown RBP13.42□□□□□ -0.26
COL20A1-201ENST00000358894 SRGNP10124 158 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 CTTNQ14247 550 aaKnown RBP13.42□□□□□ -0.26
COL20A1-201ENST00000358894 LLGL1Q15334 1064 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 PPP1R7Q15435 360 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 CDKAL1Q5VV42 579 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 TMC4Q7Z404 712 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 LRRC45Q96CN5 670 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 METTL14Q9HCE5 456 aaKnown RBP13.42□□□□□ -0.26
COL20A1-201ENST00000358894 AMFRQ9UKV5 643 aa13.42□□□□□ -0.26
COL20A1-201ENST00000358894 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.42□□□□□ -0.26
COL20A1-201ENST00000358894 GFPT2O94808 682 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 GH2P01242 217 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 ALAS1P13196 640 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 NT5C2P49902 561 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 BIRC3Q13489 604 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 TMED8Q6PL24 325 aaPredicted RBP13.41□□□□□ -0.26
COL20A1-201ENST00000358894 CHURC1Q8WUH1 139 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 CCDC127Q96BQ5 260 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 ZMYND12Q9H0C1 365 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 QTRT2Q9H974 415 aaKnown RBP13.41□□□□□ -0.26
COL20A1-201ENST00000358894 EIF3CLB5ME19 914 aaKnown RBP13.41□□□□□ -0.26
COL20A1-201ENST00000358894 K7ENM7 598 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 MMP10P09238 476 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 PDHBP11177 359 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 KRT71Q3SY84 523 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 FAM83BQ5T0W9 1011 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 MIER3Q7Z3K6 550 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 EIF3CQ99613 913 aaKnown RBP13.41□□□□□ -0.26
COL20A1-201ENST00000358894 IL17RBQ9NRM6 502 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 FAM184BQ9ULE4 1060 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 SERPING1P05155 500 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 PMS1P54277 932 aaKnown RBP13.41□□□□□ -0.26
COL20A1-201ENST00000358894 SEL1L2Q5TEA6 688 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 SFR1Q86XK3 245 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 FAM186BQ8IYM0 893 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 GCNT4Q9P109 453 aa13.41□□□□□ -0.26
COL20A1-201ENST00000358894 PACSIN2Q9UNF0 486 aaPredicted RBP13.41□□□□□ -0.26
COL20A1-201ENST00000358894 NPHP3-ACAD11A0A0J9YXS1 232 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 A0A0U1RQJ8 604 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 ESYT3A0FGR9 886 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 KIF4AO95239 1232 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 CYP2C19P33261 490 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 CTNNA1P35221 906 aaKnown RBP13.4□□□□□ -0.26
COL20A1-201ENST00000358894 CRKP46108 304 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 NT5DC1Q5TFE4 455 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 CAPS2Q9BXY5 557 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 TDRD3Q9H7E2 651 aaKnown RBP13.4□□□□□ -0.26
COL20A1-201ENST00000358894 ARHGAP4P98171 946 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 GRIPAP1Q4V328 841 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 SYCE1Q8N0S2 351 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 PPANQ9NQ55 473 aaKnown RBP13.4□□□□□ -0.26
COL20A1-201ENST00000358894 MTRF1LQ9UGC7 380 aaKnown RBP13.4□□□□□ -0.26
COL20A1-201ENST00000358894 AFDNP55196 1824 aaKnown RBP13.4□□□□□ -0.26
COL20A1-201ENST00000358894 FAM237AA0A1B0GTK4 181 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms