RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 GHRP10912 638 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 TNFRSF8P28908 595 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 LACTB2Q53H82 288 aaPredicted RBP12.5□□□□□ -0.41
CNOT3-202ENST00000358389 ZNF662Q6ZS27 426 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 DNAAF5Q86Y56 855 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 MREGQ8N565 214 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 SLC17A8Q8NDX2 589 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 DHTKD1Q96HY7 919 aaPredicted RBP12.5□□□□□ -0.41
CNOT3-202ENST00000358389 CELF4Q9BZC1 486 aaKnown RBP12.5□□□□□ -0.41
CNOT3-202ENST00000358389 ITSN1Q15811 1721 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 C6orf229H3BNL8 230 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 STK4Q13043 487 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 ANKRD20A2Q5SQ80 823 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 ANKRD20A1Q5TYW2 823 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 ANKRD20A3Q5VUR7 823 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 DENND2CQ68D51 928 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 TTI2Q6NXR4 508 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 USP38Q8NB14 1042 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 C3P01024 1663 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 PLEKHG1Q9ULL1 1385 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 LGR5O75473 907 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 CCND1P24385 295 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 ICA1Q05084 483 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 VWA3BQ502W6 1294 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 LONP2Q86WA8 852 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 PAIP2Q9BPZ3 127 aaKnown RBP12.49□□□□□ -0.41
CNOT3-202ENST00000358389 LBHD1Q9BQE6 289 aaPredicted RBP12.49□□□□□ -0.41
CNOT3-202ENST00000358389 AZI2Q9H6S1 392 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 KANSL2Q9H9L4 492 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 KRT13P13646 458 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 LTKP29376 864 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 PLTPP55058 493 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 DDB1Q16531 1140 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 OTUD6AQ7L8S5 288 aa12.49□□□□□ -0.41
CNOT3-202ENST00000358389 TTI1O43156 1089 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 PEX26Q7Z412 305 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 SDR42E1Q8WUS8 393 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 EBF2Q9HAK2 575 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 HOMER3Q9NSC5 361 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 LMTK3Q96Q04 1460 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 STXBP3O00186 592 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 SMNDC1O75940 238 aaKnown RBP eCLIP12.48□□□□□ -0.412e-6■■□□□ 12.7
CNOT3-202ENST00000358389 GBP1P32455 592 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 ADCY1Q08828 1119 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 UBE3CQ15386 1083 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 CCDC6Q16204 474 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 UAP1Q16222 522 aaPredicted RBP12.48□□□□□ -0.41
CNOT3-202ENST00000358389 AGBL2Q5U5Z8 902 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 CRELD2Q6UXH1 353 aaPredicted RBP12.48□□□□□ -0.41
CNOT3-202ENST00000358389 RNF10Q8N5U6 811 aaKnown RBP12.48□□□□□ -0.41
CNOT3-202ENST00000358389 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.48□□□□□ -0.41
CNOT3-202ENST00000358389 TEKT4Q8WW24 435 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 LSM14BQ9BX40 385 aaKnown RBP12.48□□□□□ -0.41
CNOT3-202ENST00000358389 EPB41L4AQ9HCS5 686 aaPredicted RBP12.48□□□□□ -0.41
CNOT3-202ENST00000358389 IRS4O14654 1257 aaPredicted RBP12.48□□□□□ -0.41
CNOT3-202ENST00000358389 NUGGCQ68CJ6 796 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 FMO2Q99518 471 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 DUSP9Q99956 384 aaKnown RBP12.48□□□□□ -0.41
CNOT3-202ENST00000358389 FAM129AQ9BZQ8 928 aa12.48□□□□□ -0.41
CNOT3-202ENST00000358389 RASSF10A6NK89 507 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 SPDYE3A6NKU9 549 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 F8W031 263 aaPredicted RBP12.47□□□□□ -0.41
CNOT3-202ENST00000358389 PGRMC1O00264 195 aaKnown RBP12.47□□□□□ -0.41
CNOT3-202ENST00000358389 NKRFO15226 690 aaKnown RBP eCLIP12.47□□□□□ -0.41
CNOT3-202ENST00000358389 FGFR1OPO95684 399 aaKnown RBP12.47□□□□□ -0.41
CNOT3-202ENST00000358389 LONP1P36776 959 aaKnown RBP12.47□□□□□ -0.41
CNOT3-202ENST00000358389 RPS6KA3P51812 740 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 LAMB3Q13751 1172 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 TMEM132AQ24JP5 1023 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 VSIG1Q86XK7 387 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 FAM133AQ8N9E0 248 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 GPKOWQ92917 476 aaPredicted RBP eCLIP12.47□□□□□ -0.412e-6■■■□□ 15.9
CNOT3-202ENST00000358389 NAF1Q96HR8 494 aaKnown RBP12.47□□□□□ -0.41
CNOT3-202ENST00000358389 TRIM51Q9BSJ1 452 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 PHF20Q9BVI0 1012 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 PACSIN1Q9BY11 444 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 NEUROG2Q9H2A3 272 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 CORO1CQ9ULV4 474 aaPredicted RBP12.47□□□□□ -0.41
CNOT3-202ENST00000358389 NIP7Q9Y221 180 aaKnown RBP eCLIP12.47□□□□□ -0.41
CNOT3-202ENST00000358389 SOS2Q07890 1332 aaPredicted RBP12.47□□□□□ -0.41
CNOT3-202ENST00000358389 TRAF5O00463 557 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 CIAO1O76071 339 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 SUN1O94901 812 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 SHBGP04278 402 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 ATP4AP20648 1035 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 RAD23BP54727 409 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 BYSLQ13895 437 aaKnown RBP12.47□□□□□ -0.41
CNOT3-202ENST00000358389 LRRC41Q15345 812 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 DDX23Q9BUQ8 820 aaKnown RBP12.47□□□□□ -0.41
CNOT3-202ENST00000358389 TTYH3Q9C0H2 523 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 TRIM33Q9UPN9 1127 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 SNAP23O00161 211 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 UQCRFS1P1P0C7P4 283 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 TSG101Q99816 390 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 TRIM7Q9C029 511 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 AGAP1Q9UPQ3 857 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 RTL9Q8NET4 1388 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 GRID2IPA4D2P6 1211 aa12.47□□□□□ -0.41
CNOT3-202ENST00000358389 SRRM3A6NNA2 597 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms