RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 ARMC6Q6NXE6 501 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 RUFY4Q6ZNE9 571 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 LEMD2Q8NC56 503 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 URGCPQ8TCY9 931 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 GRK7Q8WTQ7 553 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 GPAA1O43292 621 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 FSCBQ5H9T9 825 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 ATG16L1Q676U5 607 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 OR6B2Q6IFH4 312 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 THEM5Q8N1Q8 247 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 CABS1Q96KC9 395 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 FRMD6Q96NE9 622 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 LMNAP02545 664 aaKnown RBP10.54□□□□□ -0.72
CHD3-202ENST00000358181 GOLGA8HP0CJ92 632 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 LMNB2Q03252 620 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 C8orf34Q49A92 452 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 GLYCTKQ8IVS8 523 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 STAG1Q8WVM7 1258 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 CENPTQ96BT3 561 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 FBXO2Q9UK22 296 aaPredicted RBP10.54□□□□□ -0.72
CHD3-202ENST00000358181 SLC27A2O14975 620 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 CHEK2O96017 543 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 NFKBIAP25963 317 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 DEUP1Q05D60 604 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 LRRC74AQ0VAA2 488 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 KIAA1755Q5JYT7 1200 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 TTC38Q5R3I4 469 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 PKN3Q6P5Z2 889 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 TTC23LQ6PF05 361 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 PCIF1Q9H4Z3 704 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 PANK4Q9NVE7 773 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 EIF4G3O43432 1585 aaKnown RBP10.54□□□□□ -0.72
CHD3-202ENST00000358181 CIITAP33076 1130 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 EVCP57679 992 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 MIS18BP1Q6P0N0 1132 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 LRRC8CQ8TDW0 803 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 ERLEC1Q96DZ1 483 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 ZBTB18Q99592 522 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 PRAG1Q86YV5 1406 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 EIF3CLB5ME19 914 aaKnown RBP10.53□□□□□ -0.72
CHD3-202ENST00000358181 KRIT1O00522 736 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 MAP3K13O43283 966 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 COBLO75128 1261 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 PPARGP37231 505 aaPredicted RBP10.53□□□□□ -0.72
CHD3-202ENST00000358181 GYG1P46976 350 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 PHLDB3Q6NSJ2 640 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 CHURC1Q8WUH1 139 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 SDR42E1Q8WUS8 393 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 ITSN2Q9NZM3 1697 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 CTNNA1P35221 906 aaKnown RBP10.53□□□□□ -0.72
CHD3-202ENST00000358181 BCAMP50895 628 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 KLHL24Q6TFL4 600 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 DHX32Q7L7V1 743 aaKnown RBP10.53□□□□□ -0.72
CHD3-202ENST00000358181 GIPC2Q8TF65 315 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 METTL22Q9BUU2 404 aaPredicted RBP10.53□□□□□ -0.72
CHD3-202ENST00000358181 CUL1Q13616 776 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 TOMM20Q15388 145 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 INAQ16352 499 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 APPL2Q8NEU8 664 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.53□□□□□ -0.722e-6■■■■■ 29
CHD3-202ENST00000358181 ZWILCHQ9H900 591 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 SLC52A2Q9HAB3 445 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 PRR23D1E9PI22 279 aaPredicted RBP10.53□□□□□ -0.72
CHD3-202ENST00000358181 TRIM37O94972 964 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 PRR23D2P0DMB1 279 aaPredicted RBP10.53□□□□□ -0.72
CHD3-202ENST00000358181 BASP1P80723 227 aaKnown RBP10.53□□□□□ -0.72
CHD3-202ENST00000358181 CERKLQ49MI3 558 aaPredicted RBP10.53□□□□□ -0.72
CHD3-202ENST00000358181 TMTC3Q6ZXV5 915 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 MIGA2Q7L4E1 593 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 KDELC2Q7Z4H8 507 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 VN1R5Q7Z5H4 357 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 NOSTRINQ8IVI9 506 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 HIPK4Q8NE63 616 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 PLBD2Q8NHP8 589 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 NLRP4Q96MN2 994 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 KLHL14Q9P2G3 628 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 ZNF532Q9HCE3 1301 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 E9PMD0 336 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 PDE8AO60658 829 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 ARL4AP40617 200 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 RALGAPBQ86X10 1494 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 TMED2Q15363 201 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 TRIP13Q15645 432 aaPredicted RBP10.53□□□□□ -0.72
CHD3-202ENST00000358181 TRIM4Q9C037 500 aa10.53□□□□□ -0.72
CHD3-202ENST00000358181 ENC1O14682 589 aa10.52□□□□□ -0.72
CHD3-202ENST00000358181 BPIFB4P59827 614 aa10.52□□□□□ -0.72
CHD3-202ENST00000358181 CCDC92Q53HC0 331 aaPredicted RBP10.52□□□□□ -0.72
CHD3-202ENST00000358181 RASIP1Q5U651 963 aa10.52□□□□□ -0.72
CHD3-202ENST00000358181 PLA2G4DQ86XP0 818 aa10.52□□□□□ -0.72
CHD3-202ENST00000358181 ULK4Q96C45 1275 aa10.52□□□□□ -0.72
CHD3-202ENST00000358181 CYP4A11Q02928 519 aa10.52□□□□□ -0.72
CHD3-202ENST00000358181 ITPRIPL1Q6GPH6 555 aa10.52□□□□□ -0.72
CHD3-202ENST00000358181 C2orf69Q8N8R5 385 aa10.52□□□□□ -0.72
CHD3-202ENST00000358181 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.52□□□□□ -0.72
CHD3-202ENST00000358181 CALN1Q9BXU9 219 aa10.52□□□□□ -0.72
CHD3-202ENST00000358181 TRIM8Q9BZR9 551 aa10.52□□□□□ -0.72
CHD3-202ENST00000358181 PJA2O43164 708 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 GTPBP6O43824 516 aaPredicted RBP10.52□□□□□ -0.73
CHD3-202ENST00000358181 PWP1Q13610 501 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 KLC3Q6P597 504 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms