RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 FAM20AQ96MK3 541 aa16.81■□□□□ 0.28
CCNE1-202ENST00000357943 TELO2Q9Y4R8 837 aa16.81■□□□□ 0.28
CCNE1-202ENST00000357943 PSMD10O75832 226 aa16.81■□□□□ 0.28
CCNE1-202ENST00000357943 FARP2O94887 1054 aaPredicted RBP16.81■□□□□ 0.28
CCNE1-202ENST00000357943 OR52Z1P0C646 297 aa16.81■□□□□ 0.28
CCNE1-202ENST00000357943 TXKP42681 527 aa16.81■□□□□ 0.28
CCNE1-202ENST00000357943 NASPP49321 788 aaPredicted RBP16.81■□□□□ 0.28
CCNE1-202ENST00000357943 IRX5P78411 483 aaPredicted RBP16.81■□□□□ 0.28
CCNE1-202ENST00000357943 CELF3Q5SZQ8 465 aaKnown RBP16.81■□□□□ 0.28
CCNE1-202ENST00000357943 LRCH2Q5VUJ6 765 aa16.81■□□□□ 0.28
CCNE1-202ENST00000357943 DHX37Q8IY37 1157 aaKnown RBP16.81■□□□□ 0.28
CCNE1-202ENST00000357943 TNPO1Q92973 898 aaKnown RBP16.81■□□□□ 0.28
CCNE1-202ENST00000357943 ANP32EQ9BTT0 268 aa16.81■□□□□ 0.28
CCNE1-202ENST00000357943 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.81■□□□□ 0.28
CCNE1-202ENST00000357943 DDX20Q9UHI6 824 aaKnown RBP16.81■□□□□ 0.28
CCNE1-202ENST00000357943 CEP131Q9UPN4 1083 aa16.81■□□□□ 0.28
CCNE1-202ENST00000357943 NFASCO94856 1347 aa16.8■□□□□ 0.28
CCNE1-202ENST00000357943 NKRFO15226 690 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCNE1-202ENST00000357943 DYNC1LI2O43237 492 aaPredicted RBP16.8■□□□□ 0.28
CCNE1-202ENST00000357943 DUSP11O75319 330 aaKnown RBP16.8■□□□□ 0.28
CCNE1-202ENST00000357943 BAG4O95429 457 aaKnown RBP16.8■□□□□ 0.28
CCNE1-202ENST00000357943 RARBP10826 455 aa16.8■□□□□ 0.28
CCNE1-202ENST00000357943 CCL5P13501 91 aa16.8■□□□□ 0.28
CCNE1-202ENST00000357943 SP4Q02446 784 aa16.8■□□□□ 0.28
CCNE1-202ENST00000357943 ARHGAP1Q07960 439 aa16.8■□□□□ 0.28
CCNE1-202ENST00000357943 HSDL1Q3SXM5 330 aa16.8■□□□□ 0.28
CCNE1-202ENST00000357943 ATL3Q6DD88 541 aa16.8■□□□□ 0.28
CCNE1-202ENST00000357943 TLK2Q86UE8 772 aa16.8■□□□□ 0.28
CCNE1-202ENST00000357943 SLFN12Q8IYM2 578 aa16.8■□□□□ 0.28
CCNE1-202ENST00000357943 LINC00301Q8NCQ3 95 aa16.8■□□□□ 0.28
CCNE1-202ENST00000357943 RIT2Q99578 217 aa16.8■□□□□ 0.28
CCNE1-202ENST00000357943 SDF4Q9BRK5 362 aa16.8■□□□□ 0.28
CCNE1-202ENST00000357943 RNF208Q9H0X6 261 aa16.8■□□□□ 0.28
CCNE1-202ENST00000357943 TTC12Q9H892 705 aaPredicted RBP16.8■□□□□ 0.28
CCNE1-202ENST00000357943 MLXIPQ9HAP2 919 aa16.8■□□□□ 0.28
CCNE1-202ENST00000357943 PAK6Q9NQU5 681 aaPredicted RBP16.8■□□□□ 0.28
CCNE1-202ENST00000357943 TBC1D22BQ9NU19 505 aa16.8■□□□□ 0.28
CCNE1-202ENST00000357943 LAD1O00515 517 aa16.79■□□□□ 0.28
CCNE1-202ENST00000357943 GAS7O60861 476 aa16.79■□□□□ 0.28
CCNE1-202ENST00000357943 GH1P01241 217 aa16.79■□□□□ 0.28
CCNE1-202ENST00000357943 NCLP19338 710 aaKnown RBP16.79■□□□□ 0.28
CCNE1-202ENST00000357943 MARCKSP29966 332 aaPredicted RBP16.79■□□□□ 0.28
CCNE1-202ENST00000357943 KRT85P78386 507 aa16.79■□□□□ 0.28
CCNE1-202ENST00000357943 SLC39A14Q15043 492 aa16.79■□□□□ 0.28
CCNE1-202ENST00000357943 IL17AQ16552 155 aa16.79■□□□□ 0.28
CCNE1-202ENST00000357943 LHX8Q68G74 356 aa16.79■□□□□ 0.28
CCNE1-202ENST00000357943 METTL7BQ6UX53 244 aa16.79■□□□□ 0.28
CCNE1-202ENST00000357943 GIMAP8Q8ND71 665 aaPredicted RBP16.79■□□□□ 0.28
CCNE1-202ENST00000357943 OR6J1Q8NGC5 347 aa16.79■□□□□ 0.28
CCNE1-202ENST00000357943 TEKT3Q9BXF9 490 aa16.79■□□□□ 0.28
CCNE1-202ENST00000357943 JPH1Q9HDC5 661 aaPredicted RBP16.79■□□□□ 0.28
CCNE1-202ENST00000357943 VAV3Q9UKW4 847 aa16.79■□□□□ 0.28
CCNE1-202ENST00000357943 CFAP45Q9UL16 551 aa16.79■□□□□ 0.28
CCNE1-202ENST00000357943 PCDHA12Q9UN75 941 aa16.79■□□□□ 0.28
CCNE1-202ENST00000357943 MYH15Q9Y2K3 1946 aa16.79■□□□□ 0.28
CCNE1-202ENST00000357943 BMP15O95972 392 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 CCNE2O96020 404 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 PGK1P00558 417 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 TECP42680 631 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 SPIRE1Q08AE8 756 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 LAMC2Q13753 1193 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 STK38Q15208 465 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 COL13A1Q5TAT6 717 aaPredicted RBP16.78■□□□□ 0.28
CCNE1-202ENST00000357943 B3GNT9Q6UX72 402 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 EMID1Q96A84 441 aaPredicted RBP16.78■□□□□ 0.28
CCNE1-202ENST00000357943 SPATA33Q96N06 139 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 UNC45AQ9H3U1 944 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 SLC9A2Q9UBY0 812 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 SYNRGQ9UMZ2 1314 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 CHMP2AO43633 222 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 MSCO60682 206 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 YEATS4O95619 227 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 PRPHP41219 470 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 AFG1LQ8WV93 481 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 DEFB118Q96PH6 123 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 GDPD2Q9HCC8 539 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 XPNPEP3Q9NQH7 507 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 Q9Y3F1 56 aa16.78■□□□□ 0.28
CCNE1-202ENST00000357943 MYADML2A6NDP7 307 aa16.77■□□□□ 0.27
CCNE1-202ENST00000357943 POTEMA6NI47 508 aa16.77■□□□□ 0.27
CCNE1-202ENST00000357943 CTAGE5O15320 804 aa16.77■□□□□ 0.27
CCNE1-202ENST00000357943 ADAMTS4O75173 837 aa16.77■□□□□ 0.27
CCNE1-202ENST00000357943 GJA9P57773 515 aa16.77■□□□□ 0.27
CCNE1-202ENST00000357943 GRIN1Q05586 938 aa16.77■□□□□ 0.27
CCNE1-202ENST00000357943 PPP2R5CQ13362 524 aa16.77■□□□□ 0.27
CCNE1-202ENST00000357943 ARL6IP4Q66PJ3 421 aaKnown RBP16.77■□□□□ 0.27
CCNE1-202ENST00000357943 DTHD1Q6ZMT9 781 aa16.77■□□□□ 0.27
CCNE1-202ENST00000357943 VWA3AA6NCI4 1184 aa16.76■□□□□ 0.27
CCNE1-202ENST00000357943 EML1O00423 815 aa16.76■□□□□ 0.27
CCNE1-202ENST00000357943 SPTLC2O15270 562 aa16.76■□□□□ 0.27
CCNE1-202ENST00000357943 C6orf222P0C671 652 aaPredicted RBP16.76■□□□□ 0.27
CCNE1-202ENST00000357943 ACTR2P61160 394 aa16.76■□□□□ 0.27
CCNE1-202ENST00000357943 BEX3Q00994 111 aa16.76■□□□□ 0.27
CCNE1-202ENST00000357943 KRT76Q01546 638 aa16.76■□□□□ 0.27
CCNE1-202ENST00000357943 PPTC7Q8NI37 304 aa16.76■□□□□ 0.27
CCNE1-202ENST00000357943 LEO1Q8WVC0 666 aaPredicted RBP16.76■□□□□ 0.27
CCNE1-202ENST00000357943 GPR20Q99678 358 aa16.76■□□□□ 0.27
CCNE1-202ENST00000357943 AP5M1Q9H0R1 490 aa16.76■□□□□ 0.27
CCNE1-202ENST00000357943 FBXO2Q9UK22 296 aaPredicted RBP16.76■□□□□ 0.27
CCNE1-202ENST00000357943 RCOR1Q9UKL0 485 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms