RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 ZNF76P36508 570 aa28.97■■■□□ 2.23
C1orf228-201ENST00000357508 EPS15P42566 896 aa28.97■■■□□ 2.23
C1orf228-201ENST00000357508 SLC12A3P55017 1021 aa28.97■■■□□ 2.23
C1orf228-201ENST00000357508 NAA30Q147X3 362 aaPredicted RBP28.97■■■□□ 2.23
C1orf228-201ENST00000357508 GPR162Q16538 588 aa28.97■■■□□ 2.23
C1orf228-201ENST00000357508 TRPM4Q8TD43 1214 aa28.97■■■□□ 2.23
C1orf228-201ENST00000357508 ERO1AQ96HE7 468 aa28.97■■■□□ 2.23
C1orf228-201ENST00000357508 FBXO28Q9NVF7 368 aa28.97■■■□□ 2.23
C1orf228-201ENST00000357508 CAPN11Q9UMQ6 739 aa28.97■■■□□ 2.23
C1orf228-201ENST00000357508 NKRFO15226 690 aaKnown RBP eCLIP28.96■■■□□ 2.23
C1orf228-201ENST00000357508 SPATA31C1P0DKV0 1188 aa28.96■■■□□ 2.23
C1orf228-201ENST00000357508 TBC1D8BQ0IIM8 1120 aa28.96■■■□□ 2.23
C1orf228-201ENST00000357508 CCDC65Q8IXS2 484 aa28.96■■■□□ 2.23
C1orf228-201ENST00000357508 MYOCDQ8IZQ8 938 aa28.96■■■□□ 2.23
C1orf228-201ENST00000357508 PDCL3Q9H2J4 239 aa28.96■■■□□ 2.23
C1orf228-201ENST00000357508 MRPL11Q9Y3B7 192 aaKnown RBP28.96■■■□□ 2.23
C1orf228-201ENST00000357508 STK24Q9Y6E0 443 aa28.96■■■□□ 2.23
C1orf228-201ENST00000357508 TEPSINQ96N21 525 aa28.96■■■□□ 2.23
C1orf228-201ENST00000357508 GNG11P61952 73 aa28.95■■■□□ 2.22
C1orf228-201ENST00000357508 LRRC55Q6ZSA7 311 aa28.95■■■□□ 2.22
C1orf228-201ENST00000357508 WDR24Q96S15 920 aa28.95■■■□□ 2.22
C1orf228-201ENST00000357508 DNAJC7Q99615 494 aa28.95■■■□□ 2.22
C1orf228-201ENST00000357508 TTYH3Q9C0H2 523 aa28.95■■■□□ 2.22
C1orf228-201ENST00000357508 LUC7L2Q9Y383 392 aaKnown RBP28.95■■■□□ 2.22
C1orf228-201ENST00000357508 PCDHA2Q9Y5H9 948 aa28.95■■■□□ 2.22
C1orf228-201ENST00000357508 NPHP3-ACAD11A0A0J9YXS1 232 aa28.94■■■□□ 2.22
C1orf228-201ENST00000357508 FGFR1OPO95684 399 aaKnown RBP28.94■■■□□ 2.22
C1orf228-201ENST00000357508 ARSHQ5FYA8 562 aa28.94■■■□□ 2.22
C1orf228-201ENST00000357508 OR8K1Q8NGG5 319 aa28.94■■■□□ 2.22
C1orf228-201ENST00000357508 ABCB11O95342 1321 aa28.94■■■□□ 2.22
C1orf228-201ENST00000357508 ZCWPW2Q504Y3 356 aa28.94■■■□□ 2.22
C1orf228-201ENST00000357508 ERGIC2Q96RQ1 377 aa28.94■■■□□ 2.22
C1orf228-201ENST00000357508 TSG101Q99816 390 aa28.94■■■□□ 2.22
C1orf228-201ENST00000357508 FGFBP2Q9BYJ0 223 aa28.94■■■□□ 2.22
C1orf228-201ENST00000357508 ZNF341Q9BYN7 854 aa28.94■■■□□ 2.22
C1orf228-201ENST00000357508 PITPNM2Q9BZ72 1349 aa28.94■■■□□ 2.22
C1orf228-201ENST00000357508 FRMD3A2A2Y4 597 aa28.93■■■□□ 2.22
C1orf228-201ENST00000357508 RASSF10A6NK89 507 aa28.93■■■□□ 2.22
C1orf228-201ENST00000357508 PSMC6P62333 389 aa28.93■■■□□ 2.22
C1orf228-201ENST00000357508 TNFAIP1Q13829 316 aa28.93■■■□□ 2.22
C1orf228-201ENST00000357508 LDHDQ86WU2 507 aa28.93■■■□□ 2.22
C1orf228-201ENST00000357508 WDR18Q9BV38 432 aa28.93■■■□□ 2.22
C1orf228-201ENST00000357508 NUP58Q9BVL2 599 aa28.93■■■□□ 2.22
C1orf228-201ENST00000357508 CACNB1Q02641 598 aaPredicted RBP28.93■■■□□ 2.22
C1orf228-201ENST00000357508 SAMD1Q6SPF0 538 aaPredicted RBP28.93■■■□□ 2.22
C1orf228-201ENST00000357508 RETREG2Q8NC44 543 aa28.93■■■□□ 2.22
C1orf228-201ENST00000357508 FEZ1Q99689 392 aa28.93■■■□□ 2.22
C1orf228-201ENST00000357508 A0A0U1RQJ8 604 aa28.92■■■□□ 2.22
C1orf228-201ENST00000357508 KLK7P49862 253 aa28.92■■■□□ 2.22
C1orf228-201ENST00000357508 HIRAP54198 1017 aaPredicted RBP28.92■■■□□ 2.22
C1orf228-201ENST00000357508 ATRIPQ8WXE1 791 aa28.92■■■□□ 2.22
C1orf228-201ENST00000357508 DNM3Q9UQ16 869 aa28.92■■■□□ 2.22
C1orf228-201ENST00000357508 MEIS1O00470 390 aa28.91■■■□□ 2.22
C1orf228-201ENST00000357508 CASQ1P31415 396 aa28.91■■■□□ 2.22
C1orf228-201ENST00000357508 VWA3BQ502W6 1294 aa28.91■■■□□ 2.22
C1orf228-201ENST00000357508 FKBP15Q5T1M5 1219 aa28.91■■■□□ 2.22
C1orf228-201ENST00000357508 SYT2Q8N9I0 419 aaPredicted RBP28.91■■■□□ 2.22
C1orf228-201ENST00000357508 ACRBPQ8NEB7 543 aa28.91■■■□□ 2.22
C1orf228-201ENST00000357508 CHP1Q99653 195 aa28.91■■■□□ 2.22
C1orf228-201ENST00000357508 LZTFL1Q9NQ48 299 aa28.91■■■□□ 2.22
C1orf228-201ENST00000357508 TBC1D7Q9P0N9 293 aa28.91■■■□□ 2.22
C1orf228-201ENST00000357508 INPP5BP32019 993 aa28.91■■■□□ 2.22
C1orf228-201ENST00000357508 MAN2A1Q16706 1144 aa28.91■■■□□ 2.22
C1orf228-201ENST00000357508 ANGEL2Q5VTE6 544 aaKnown RBP28.91■■■□□ 2.22
C1orf228-201ENST00000357508 POLR3CQ9BUI4 534 aaPredicted RBP28.91■■■□□ 2.22
C1orf228-201ENST00000357508 EML1O00423 815 aa28.9■■■□□ 2.22
C1orf228-201ENST00000357508 TRIM21P19474 475 aaKnown RBP28.9■■■□□ 2.22
C1orf228-201ENST00000357508 RAD51AP2Q09MP3 1159 aa28.9■■■□□ 2.22
C1orf228-201ENST00000357508 HERC4Q5GLZ8 1057 aaPredicted RBP28.9■■■□□ 2.22
C1orf228-201ENST00000357508 DEFB129Q9H1M3 183 aa28.9■■■□□ 2.22
C1orf228-201ENST00000357508 EHMT1Q9H9B1 1298 aa28.9■■■□□ 2.22
C1orf228-201ENST00000357508 URI1O94763 535 aaPredicted RBP28.9■■■□□ 2.22
C1orf228-201ENST00000357508 KRT18P05783 430 aaKnown RBP28.9■■■□□ 2.22
C1orf228-201ENST00000357508 PABPC4Q13310 644 aaKnown RBP eCLIP28.9■■■□□ 2.22
C1orf228-201ENST00000357508 FIGNQ5HY92 759 aa28.9■■■□□ 2.22
C1orf228-201ENST00000357508 EIF2AK1Q9BQI3 630 aaKnown RBP28.9■■■□□ 2.22
C1orf228-201ENST00000357508 NDST4Q9H3R1 872 aa28.9■■■□□ 2.22
C1orf228-201ENST00000357508 WDR59Q6PJI9 974 aa28.89■■■□□ 2.22
C1orf228-201ENST00000357508 AGPAT5Q9NUQ2 364 aa28.89■■■□□ 2.22
C1orf228-201ENST00000357508 UBXN2AP68543 259 aa28.88■■■□□ 2.21
C1orf228-201ENST00000357508 CYP4A11Q02928 519 aa28.88■■■□□ 2.21
C1orf228-201ENST00000357508 GIT2Q14161 759 aa28.88■■■□□ 2.21
C1orf228-201ENST00000357508 LRRN4CLQ8ND94 238 aa28.88■■■□□ 2.21
C1orf228-201ENST00000357508 SLC5A5Q92911 643 aa28.88■■■□□ 2.21
C1orf228-201ENST00000357508 IRX2Q9BZI1 471 aaPredicted RBP28.88■■■□□ 2.21
C1orf228-201ENST00000357508 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.88■■■□□ 2.21
C1orf228-201ENST00000357508 V9GYY5 206 aaPredicted RBP28.88■■■□□ 2.21
C1orf228-201ENST00000357508 DOCK1Q14185 1865 aa28.88■■■□□ 2.21
C1orf228-201ENST00000357508 ZNF536O15090 1300 aa28.88■■■□□ 2.21
C1orf228-201ENST00000357508 WDR46O15213 610 aaKnown RBP28.88■■■□□ 2.21
C1orf228-201ENST00000357508 PSMD10O75832 226 aa28.88■■■□□ 2.21
C1orf228-201ENST00000357508 ICAM1P05362 532 aa28.88■■■□□ 2.21
C1orf228-201ENST00000357508 FKBP3Q00688 224 aaKnown RBP28.88■■■□□ 2.21
C1orf228-201ENST00000357508 MEA1Q16626 185 aa28.88■■■□□ 2.21
C1orf228-201ENST00000357508 SCFD1Q8WVM8 642 aa28.88■■■□□ 2.21
C1orf228-201ENST00000357508 PCMTD1Q96MG8 357 aaPredicted RBP28.88■■■□□ 2.21
C1orf228-201ENST00000357508 LRCH2Q5VUJ6 765 aa28.87■■■□□ 2.21
C1orf228-201ENST00000357508 OTOP1Q7RTM1 612 aa28.87■■■□□ 2.21
C1orf228-201ENST00000357508 PDCL2Q8N4E4 241 aa28.87■■■□□ 2.21
C1orf228-201ENST00000357508 AGBL1Q96MI9 1066 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms