RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 INPP1P49441 399 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 LMBR1LQ6UX01 489 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 CRELD2Q6UXH1 353 aaPredicted RBP7.09□□□□□ -1.27
VPS13B-202ENST00000357162 MAGEB6Q8N7X4 407 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 FANCBQ8NB91 859 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 TEKT2Q9UIF3 430 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 C16orf87Q6PH81 154 aa7.09□□□□□ -1.28
VPS13B-202ENST00000357162 RBM41Q96IZ5 413 aaKnown RBP7.09□□□□□ -1.28
VPS13B-202ENST00000357162 SEC24BO95487 1268 aa7.09□□□□□ -1.28
VPS13B-202ENST00000357162 SCG2P13521 617 aa7.09□□□□□ -1.28
VPS13B-202ENST00000357162 IL13P35225 146 aa7.09□□□□□ -1.28
VPS13B-202ENST00000357162 DR1Q01658 176 aa7.09□□□□□ -1.28
VPS13B-202ENST00000357162 PPP1R18Q6NYC8 613 aa7.09□□□□□ -1.28
VPS13B-202ENST00000357162 FRA10AC1Q70Z53 315 aa7.09□□□□□ -1.28
VPS13B-202ENST00000357162 COPS6Q7L5N1 327 aa7.09□□□□□ -1.28
VPS13B-202ENST00000357162 USP28Q96RU2 1077 aa7.09□□□□□ -1.28
VPS13B-202ENST00000357162 TBC1D9BQ66K14 1250 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 LSG1Q9H089 658 aaKnown RBP7.08□□□□□ -1.28
VPS13B-202ENST00000357162 CXorf56Q9H5V9 222 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 ATP6V0A4Q9HBG4 840 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 TBC1D7Q9P0N9 293 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 CCNT1O60563 726 aaKnown RBP7.08□□□□□ -1.28
VPS13B-202ENST00000357162 SYN2Q92777 582 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-202ENST00000357162 STX17P56962 302 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 STK38LQ9Y2H1 464 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 CDH2P19022 906 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-202ENST00000357162 RSBN1LQ6PCB5 846 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-202ENST00000357162 GAS2L3Q86XJ1 694 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 CNBD1Q8NA66 436 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 CATSPER2Q96P56 530 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 MCM9Q9NXL9 1143 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 AREL1O15033 823 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 GCKRQ14397 625 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 CCPG1Q9ULG6 757 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 SETBP1Q9Y6X0 1596 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 TTKP33981 857 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 KLHL7Q8IXQ5 586 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 TMEM206Q9H813 350 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 SEL1LQ9UBV2 794 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 PSMD14O00487 310 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 PPP1R37O75864 691 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 ARL1P40616 181 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-202ENST00000357162 JADE1Q6IE81 842 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 ICA1LQ8NDH6 482 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 ATL2Q8NHH9 583 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 WWP1Q9H0M0 922 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 CDK17Q00537 523 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 ASPRV1Q53RT3 343 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 FAM26FQ5R3K3 315 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 ZNF280CQ8ND82 737 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 HIC2Q96JB3 615 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 CEP72Q9P209 647 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 E7EWF7 191 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 DTNBO60941 627 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 NUP107P57740 925 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 EHHADHQ08426 723 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 BLIDQ8IZY5 108 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 CDHR1Q96JP9 859 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 NUDCD1Q96RS6 583 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 VPS16Q9H269 839 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 HNRNPH2P55795 449 aaKnown RBP7.08□□□□□ -1.28
VPS13B-202ENST00000357162 MAGOHBQ96A72 148 aaKnown RBP7.08□□□□□ -1.28
VPS13B-202ENST00000357162 GID8Q9NWU2 228 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 GYG2O15488 501 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 CCNE1P24864 410 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 STAT4Q14765 748 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 TPTE2Q6XPS3 522 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 ATP6V0A1Q93050 837 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 BICC1Q9H694 974 aaKnown RBP7.08□□□□□ -1.28
VPS13B-202ENST00000357162 CHCHD3Q9NX63 227 aaKnown RBP7.08□□□□□ -1.28
VPS13B-202ENST00000357162 ARHGEF40Q8TER5 1519 aa7.08□□□□□ -1.28
VPS13B-202ENST00000357162 TAP1Q03518 808 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 LAMB3Q13751 1172 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 WDR93Q6P2C0 686 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 TNIP2Q8NFZ5 429 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 UIMC1Q96RL1 719 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 KRT8P05787 483 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 PTK2Q05397 1052 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 SMARCAL1Q9NZC9 954 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 PCDHA5Q9Y5H7 936 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 USP14P54578 494 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 ADKP55263 362 aaKnown RBP7.07□□□□□ -1.28
VPS13B-202ENST00000357162 CMTM5Q96DZ9 223 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 CYP26B1Q9NR63 512 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 ERVV-2B6SEH9 535 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 YY1P25490 414 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 PPARGP37231 505 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-202ENST00000357162 MSH2P43246 934 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 RAB15P59190 212 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 RESP18Q5W5W9 173 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 CCDC17Q96LX7 622 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 TXNDC9O14530 226 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 LIN7AO14910 233 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-202ENST00000357162 APOEP02649 317 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 ZSCAN10Q96SZ4 725 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-202ENST00000357162 H0Y626 953 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 TRIM16O95361 564 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 FAM178BQ8IXR5 827 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 LSM14BQ9BX40 385 aaKnown RBP7.07□□□□□ -1.28
VPS13B-202ENST00000357162 PPIP5K2O43314 1243 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms