RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 DCDC2CA8MYV0 355 aa16.74■□□□□ 0.27
VAT1-201ENST00000355653 OPLAHO14841 1288 aa16.74■□□□□ 0.27
VAT1-201ENST00000355653 TRAPPC3O43617 180 aa16.74■□□□□ 0.27
VAT1-201ENST00000355653 NONOQ15233 471 aaKnown RBP eCLIP16.74■□□□□ 0.272e-6■■■■□ 22.7
VAT1-201ENST00000355653 RPS6KA1Q15418 735 aa16.74■□□□□ 0.27
VAT1-201ENST00000355653 ANKRD20A8PQ5CZ79 823 aa16.74■□□□□ 0.27
VAT1-201ENST00000355653 TSG101Q99816 390 aa16.74■□□□□ 0.27
VAT1-201ENST00000355653 DDX47Q9H0S4 455 aaKnown RBP16.74■□□□□ 0.27
VAT1-201ENST00000355653 CEP72Q9P209 647 aa16.74■□□□□ 0.27
VAT1-201ENST00000355653 FBXL5Q9UKA1 691 aa16.74■□□□□ 0.27
VAT1-201ENST00000355653 LEMD3Q9Y2U8 911 aa16.74■□□□□ 0.27
VAT1-201ENST00000355653 ATP6V0A2Q9Y487 856 aa16.74■□□□□ 0.27
VAT1-201ENST00000355653 CACNA1SQ13698 1873 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 FRMD3A2A2Y4 597 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 PHF20L1A8MW92 1017 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 RBAK-RBAKDNI3L0D1 243 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 TRAF5O00463 557 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 ECHS1P30084 290 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 FLT3P36888 993 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 KLHL30Q0D2K2 578 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 DRP2Q13474 957 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 UNC13DQ70J99 1090 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 CPLX4Q7Z7G2 160 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 DHX37Q8IY37 1157 aaKnown RBP16.73■□□□□ 0.27
VAT1-201ENST00000355653 CACNA2D3Q8IZS8 1091 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 NSUN4Q96CB9 384 aaKnown RBP16.73■□□□□ 0.27
VAT1-201ENST00000355653 CNOT8Q9UFF9 292 aaKnown RBP16.73■□□□□ 0.27
VAT1-201ENST00000355653 SLC12A6Q9UHW9 1150 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 GGA2Q9UJY4 613 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 PCDHGC5Q9Y5F6 944 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 ZNF804BA4D1E1 1349 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 CASZ1Q86V15 1759 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 NOL4O94818 638 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 LRRC63Q05C16 580 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 GRB10Q13322 594 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 GUF1Q8N442 669 aaKnown RBP16.73■□□□□ 0.27
VAT1-201ENST00000355653 LARP4BQ92615 738 aaKnown RBP16.73■□□□□ 0.27
VAT1-201ENST00000355653 LRRC45Q96CN5 670 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 VEZTQ9HBM0 779 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 BLOC1S4Q9NUP1 217 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 TBC1D7Q9P0N9 293 aa16.73■□□□□ 0.27
VAT1-201ENST00000355653 MAGOHP61326 146 aaKnown RBP16.72■□□□□ 0.27
VAT1-201ENST00000355653 PPP2R2AP63151 447 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 SLC18A3Q16572 532 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 LRIG3Q6UXM1 1119 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 NEK8Q86SG6 692 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 RPAINQ86UA6 219 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 RAPGEF5Q92565 580 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 MAGOHBQ96A72 148 aaKnown RBP16.72■□□□□ 0.27
VAT1-201ENST00000355653 VAT1LQ9HCJ6 419 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 TPX2Q9ULW0 747 aaKnown RBP16.72■□□□□ 0.27
VAT1-201ENST00000355653 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.72■□□□□ 0.27
VAT1-201ENST00000355653 SMCO2A6NFE2 343 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 H0YGN5 161 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 SCTRP47872 440 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 GRM4Q14833 912 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 INTS5Q6P9B9 1019 aaKnown RBP16.72■□□□□ 0.27
VAT1-201ENST00000355653 RUFY4Q6ZNE9 571 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 FAM228AQ86W67 206 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 DAGLBQ8NCG7 672 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 C1orf131Q8NDD1 294 aaKnown RBP16.72■□□□□ 0.27
VAT1-201ENST00000355653 TBCKQ8TEA7 893 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 MKNK2Q9HBH9 465 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 ARPP21Q9UBL0 812 aaPredicted RBP16.72■□□□□ 0.27
VAT1-201ENST00000355653 BIN2Q9UBW5 565 aaPredicted RBP16.72■□□□□ 0.27
VAT1-201ENST00000355653 NFS1Q9Y697 457 aa16.72■□□□□ 0.27
VAT1-201ENST00000355653 ZNF335Q9H4Z2 1342 aaPredicted RBP16.72■□□□□ 0.27
VAT1-201ENST00000355653 TMCO5BA8MYB1 307 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 KIF1CO43896 1103 aaKnown RBP16.71■□□□□ 0.27
VAT1-201ENST00000355653 PRDX5P30044 214 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 ANKS1AQ92625 1134 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 SGSM3Q96HU1 749 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 NIP7Q9Y221 180 aaKnown RBP eCLIP16.71■□□□□ 0.27
VAT1-201ENST00000355653 COL4A3BPQ9Y5P4 624 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 POTEMA6NI47 508 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 SART1O43290 800 aaKnown RBP16.71■□□□□ 0.27
VAT1-201ENST00000355653 DAPK3O43293 454 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 CLSTN1O94985 981 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 KLRK1P26718 216 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 GNAQP50148 359 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 CUL1Q13616 776 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 KRT71Q3SY84 523 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 COBLL1Q53SF7 1204 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 GALNT17Q6IS24 598 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 KRT25Q7Z3Z0 450 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 DDX12PQ92771 950 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 ACSBG1Q96GR2 724 aa16.71■□□□□ 0.27
VAT1-201ENST00000355653 C21orf2O43822 256 aa16.7■□□□□ 0.26
VAT1-201ENST00000355653 TSPY3P0CV98 308 aa16.7■□□□□ 0.26
VAT1-201ENST00000355653 TSPY8P0CW00 308 aa16.7■□□□□ 0.26
VAT1-201ENST00000355653 EZRP15311 586 aaKnown RBP16.7■□□□□ 0.26
VAT1-201ENST00000355653 EPS15P42566 896 aa16.7■□□□□ 0.26
VAT1-201ENST00000355653 GKAP1Q5VSY0 366 aaPredicted RBP16.7■□□□□ 0.26
VAT1-201ENST00000355653 NELFCDQ8IXH7 590 aa16.7■□□□□ 0.26
VAT1-201ENST00000355653 MDM1Q8TC05 714 aa16.7■□□□□ 0.26
VAT1-201ENST00000355653 FAM84BQ96KN1 310 aaPredicted RBP16.7■□□□□ 0.26
VAT1-201ENST00000355653 TACO1Q9BSH4 297 aaKnown RBP16.7■□□□□ 0.26
VAT1-201ENST00000355653 LRRC4CQ9HCJ2 640 aa16.7■□□□□ 0.26
VAT1-201ENST00000355653 ATP8A2Q9NTI2 1148 aa16.7■□□□□ 0.26
VAT1-201ENST00000355653 AMACRQ9UHK6 382 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms