RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 CACNB1Q02641 598 aaPredicted RBP13.47□□□□□ -0.25
COLCA1-201ENST00000355430 NAA25Q14CX7 972 aa13.47□□□□□ -0.25
COLCA1-201ENST00000355430 EFCAB13Q8IY85 973 aa13.47□□□□□ -0.25
COLCA1-201ENST00000355430 TC2NQ8N9U0 490 aa13.47□□□□□ -0.25
COLCA1-201ENST00000355430 CCND2P30279 289 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 CYP2C19P33261 490 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 PLCB3Q01970 1234 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 CCDC6Q16204 474 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 IGDCC4Q8TDY8 1250 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 RAB17Q9H0T7 212 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.46□□□□□ -0.25
COLCA1-201ENST00000355430 NKIRAS1Q9NYS0 192 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 COMMD10Q9Y6G5 202 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 CYP2D6P10635 497 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 RSRC1Q96IZ7 334 aaKnown RBP13.46□□□□□ -0.25
COLCA1-201ENST00000355430 IWS1Q96ST2 819 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 NACA2Q9H009 215 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 PLCB1Q9NQ66 1216 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 SUGT1Q9Y2Z0 365 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 A0A1B0GTH6 734 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 EXOC3O60645 756 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 ECE1P42892 770 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 ZNF157P51786 506 aaPredicted RBP13.46□□□□□ -0.25
COLCA1-201ENST00000355430 RDH13Q8NBN7 331 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 PIGSQ96S52 555 aa13.46□□□□□ -0.25
COLCA1-201ENST00000355430 APBA1Q02410 837 aa13.46□□□□□ -0.26
COLCA1-201ENST00000355430 PRR16Q569H4 304 aa13.46□□□□□ -0.26
COLCA1-201ENST00000355430 TPH2Q8IWU9 490 aa13.46□□□□□ -0.26
COLCA1-201ENST00000355430 EXOC8Q8IYI6 725 aa13.46□□□□□ -0.26
COLCA1-201ENST00000355430 CCDC105Q8IYK2 499 aa13.46□□□□□ -0.26
COLCA1-201ENST00000355430 FBF1Q8TES7 1133 aa13.46□□□□□ -0.26
COLCA1-201ENST00000355430 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.46□□□□□ -0.26
COLCA1-201ENST00000355430 KIAA1024Q9UPX6 916 aa13.46□□□□□ -0.26
COLCA1-201ENST00000355430 STAT1P42224 750 aa13.46□□□□□ -0.26
COLCA1-201ENST00000355430 NAA35Q5VZE5 725 aa13.46□□□□□ -0.26
COLCA1-201ENST00000355430 MFSD14CQ5VZR4 134 aa13.46□□□□□ -0.26
COLCA1-201ENST00000355430 RPS12P25398 132 aaKnown RBP13.45□□□□□ -0.26
COLCA1-201ENST00000355430 GGCXP38435 758 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 CYP2J2P51589 502 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 YARSP54577 528 aaKnown RBP13.45□□□□□ -0.26
COLCA1-201ENST00000355430 TFDP1Q14186 410 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 SYDE2Q5VT97 1194 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 CACNA2D3Q8IZS8 1091 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 NDST4Q9H3R1 872 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 SSX2IPQ9Y2D8 614 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 TTC26A0AVF1 554 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 BUB1BO60566 1050 aaPredicted RBP13.45□□□□□ -0.26
COLCA1-201ENST00000355430 ATP5DP30049 168 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 COPB2P35606 906 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 VSNL1P62760 191 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 NNTQ13423 1086 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 MGARPQ8TDB4 240 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 ASIC3Q9UHC3 531 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 FAM184BQ9ULE4 1060 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 SETDB1Q15047 1291 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 USP17L2Q6R6M4 530 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 SPATS2Q86XZ4 545 aaKnown RBP13.45□□□□□ -0.26
COLCA1-201ENST00000355430 OTUD5Q96G74 571 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 KCNH4Q9UQ05 1017 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 RIPOR2Q9Y4F9 1068 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 ZBTB22O15209 634 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 LACTBP83111 547 aaPredicted RBP13.45□□□□□ -0.26
COLCA1-201ENST00000355430 NR1I3Q14994 352 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 PFKFB3Q16875 520 aaPredicted RBP13.45□□□□□ -0.26
COLCA1-201ENST00000355430 INTS8Q75QN2 995 aaKnown RBP13.45□□□□□ -0.26
COLCA1-201ENST00000355430 FAM133AQ8N9E0 248 aa13.45□□□□□ -0.26
COLCA1-201ENST00000355430 ATP2A1O14983 1001 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 SEPT14Q6ZU15 432 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 TAOK1Q7L7X3 1001 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 MRRFQ96E11 262 aaKnown RBP13.44□□□□□ -0.26
COLCA1-201ENST00000355430 hCG_1984214I3L0E3 225 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 RGS16O15492 202 aaPredicted RBP13.44□□□□□ -0.26
COLCA1-201ENST00000355430 ATP1A1P05023 1023 aaKnown RBP13.44□□□□□ -0.26
COLCA1-201ENST00000355430 P4HA1P13674 534 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 ELMSAN1Q6PJG2 1045 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 RAD9BQ6WBX8 426 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 USP49Q70CQ1 688 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 REXO1L1PQ8IX06 675 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 ZNF713Q8N859 430 aaPredicted RBP13.44□□□□□ -0.26
COLCA1-201ENST00000355430 PP2D1A8MPX8 630 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 H2AFZP0C0S5 128 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 STRIP1Q5VSL9 837 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 H2AFVQ71UI9 128 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 UHMK1Q8TAS1 419 aaKnown RBP13.44□□□□□ -0.26
COLCA1-201ENST00000355430 RAET1EQ8TD07 263 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 ANKRD26Q9UPS8 1709 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 A0A087WUV0 522 aaPredicted RBP13.44□□□□□ -0.26
COLCA1-201ENST00000355430 GRIN1Q05586 938 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 XKR9Q5GH70 373 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 KIFAP3Q92845 792 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 COL4A3BPQ9Y5P4 624 aa13.44□□□□□ -0.26
COLCA1-201ENST00000355430 IGBP1P78318 339 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 IRX5P78411 483 aaPredicted RBP13.43□□□□□ -0.26
COLCA1-201ENST00000355430 IFT88Q13099 833 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 TRIM28Q13263 835 aaKnown RBP13.43□□□□□ -0.26
COLCA1-201ENST00000355430 ODR4Q5SWX8 454 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 ATP6V0A1Q93050 837 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 L2HGDHQ9H9P8 463 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 SUGCTQ9HAC7 445 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 BCRP11274 1271 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms