RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 NR3C2P08235 984 aa18.53■□□□□ 0.56
DDX55-202ENST00000354291 RRP1P56182 461 aaKnown RBP18.53■□□□□ 0.56
DDX55-202ENST00000354291 SIGLEC14Q08ET2 396 aa18.53■□□□□ 0.56
DDX55-202ENST00000354291 HSDL1Q3SXM5 330 aa18.53■□□□□ 0.56
DDX55-202ENST00000354291 MYSM1Q5VVJ2 828 aa18.53■□□□□ 0.56
DDX55-202ENST00000354291 MSLNLQ96KJ4 702 aa18.53■□□□□ 0.56
DDX55-202ENST00000354291 RPGRIP1Q96KN7 1286 aa18.53■□□□□ 0.56
DDX55-202ENST00000354291 FOXP2O15409 715 aa18.52■□□□□ 0.56
DDX55-202ENST00000354291 MYCLP12524 364 aaPredicted RBP18.52■□□□□ 0.56
DDX55-202ENST00000354291 MCF2L2Q86YR7 1114 aa18.52■□□□□ 0.56
DDX55-202ENST00000354291 APBB2Q92870 758 aa18.52■□□□□ 0.56
DDX55-202ENST00000354291 PPP2R3CQ969Q6 453 aa18.52■□□□□ 0.56
DDX55-202ENST00000354291 CLEC1BQ9P126 229 aa18.52■□□□□ 0.56
DDX55-202ENST00000354291 ANAPC4Q9UJX5 808 aa18.52■□□□□ 0.56
DDX55-202ENST00000354291 WDR87Q6ZQQ6 2873 aa18.52■□□□□ 0.55
DDX55-202ENST00000354291 ABCB11O95342 1321 aa18.51■□□□□ 0.55
DDX55-202ENST00000354291 GGPS1O95749 300 aa18.51■□□□□ 0.55
DDX55-202ENST00000354291 LINC00271P0C7V0 271 aa18.51■□□□□ 0.55
DDX55-202ENST00000354291 SMIM10L2AP0DMW4 78 aa18.51■□□□□ 0.55
DDX55-202ENST00000354291 SMIM10L2BP0DMW5 78 aa18.51■□□□□ 0.55
DDX55-202ENST00000354291 HOXD8P13378 290 aaPredicted RBP18.51■□□□□ 0.55
DDX55-202ENST00000354291 BTG3Q14201 252 aaPredicted RBP18.51■□□□□ 0.55
DDX55-202ENST00000354291 CDC37Q16543 378 aaPredicted RBP18.51■□□□□ 0.55
DDX55-202ENST00000354291 CELF3Q5SZQ8 465 aaKnown RBP18.51■□□□□ 0.55
DDX55-202ENST00000354291 C16orf70Q9BSU1 422 aa18.51■□□□□ 0.55
DDX55-202ENST00000354291 RNPEPQ9H4A4 650 aa18.51■□□□□ 0.55
DDX55-202ENST00000354291 TCP11L1Q9NUJ3 509 aa18.51■□□□□ 0.55
DDX55-202ENST00000354291 PLAGL2Q9UPG8 496 aa18.51■□□□□ 0.55
DDX55-202ENST00000354291 VPS13AQ96RL7 3174 aa18.5■□□□□ 0.55
DDX55-202ENST00000354291 H3BRB1 525 aa18.5■□□□□ 0.55
DDX55-202ENST00000354291 MMP1P03956 469 aa18.5■□□□□ 0.55
DDX55-202ENST00000354291 CAMK1Q14012 370 aa18.5■□□□□ 0.55
DDX55-202ENST00000354291 CBX2Q14781 532 aaPredicted RBP18.5■□□□□ 0.55
DDX55-202ENST00000354291 VPS53Q5VIR6 699 aa18.5■□□□□ 0.55
DDX55-202ENST00000354291 ASCL5Q7RTU5 278 aa18.5■□□□□ 0.55
DDX55-202ENST00000354291 RBM23Q86U06 439 aaKnown RBP18.5■□□□□ 0.55
DDX55-202ENST00000354291 CLP1Q92989 425 aaKnown RBP18.5■□□□□ 0.55
DDX55-202ENST00000354291 ASIC4Q96FT7 647 aa18.5■□□□□ 0.55
DDX55-202ENST00000354291 TUT1Q9H6E5 874 aaKnown RBP18.5■□□□□ 0.55
DDX55-202ENST00000354291 MLXIPQ9HAP2 919 aa18.5■□□□□ 0.55
DDX55-202ENST00000354291 PXMP2Q9NR77 195 aa18.5■□□□□ 0.55
DDX55-202ENST00000354291 USP15Q9Y4E8 981 aaPredicted RBP18.5■□□□□ 0.55
DDX55-202ENST00000354291 PCDHB15Q9Y5E8 787 aa18.5■□□□□ 0.55
DDX55-202ENST00000354291 FAM186AA6NE01 2351 aa18.5■□□□□ 0.55
DDX55-202ENST00000354291 ADGRA3Q8IWK6 1321 aa18.49■□□□□ 0.55
DDX55-202ENST00000354291 CAND2O75155 1236 aa18.49■□□□□ 0.55
DDX55-202ENST00000354291 KDM4AO75164 1064 aa18.49■□□□□ 0.55
DDX55-202ENST00000354291 CFBP00751 764 aa18.49■□□□□ 0.55
DDX55-202ENST00000354291 FGRP09769 529 aa18.49■□□□□ 0.55
DDX55-202ENST00000354291 SNHG28P0DPA3 235 aa18.49■□□□□ 0.55
DDX55-202ENST00000354291 NRIP1P48552 1158 aa18.49■□□□□ 0.55
DDX55-202ENST00000354291 GPATCH4Q5T3I0 446 aaKnown RBP18.49■□□□□ 0.55
DDX55-202ENST00000354291 ADGRD2Q7Z7M1 963 aa18.49■□□□□ 0.55
DDX55-202ENST00000354291 EFHBQ8N7U6 833 aa18.49■□□□□ 0.55
DDX55-202ENST00000354291 SMRP1Q8NCR6 262 aa18.49■□□□□ 0.55
DDX55-202ENST00000354291 PHF7Q9BWX1 381 aaPredicted RBP18.49■□□□□ 0.55
DDX55-202ENST00000354291 MAF1Q9H063 256 aa18.49■□□□□ 0.55
DDX55-202ENST00000354291 SETD4Q9NVD3 440 aa18.49■□□□□ 0.55
DDX55-202ENST00000354291 BARX2Q9UMQ3 279 aaPredicted RBP18.49■□□□□ 0.55
DDX55-202ENST00000354291 TRPC6Q9Y210 931 aa18.49■□□□□ 0.55
DDX55-202ENST00000354291 MRPL11Q9Y3B7 192 aaKnown RBP18.49■□□□□ 0.55
DDX55-202ENST00000354291 NLRC5Q86WI3 1866 aa18.49■□□□□ 0.55
DDX55-202ENST00000354291 RGS20O76081 388 aa18.48■□□□□ 0.55
DDX55-202ENST00000354291 HSPD1P10809 573 aaKnown RBP18.48■□□□□ 0.55
DDX55-202ENST00000354291 DNAJB1P25685 340 aa18.48■□□□□ 0.55
DDX55-202ENST00000354291 SP2Q02086 613 aa18.48■□□□□ 0.55
DDX55-202ENST00000354291 COASYQ13057 564 aa18.48■□□□□ 0.55
DDX55-202ENST00000354291 KCNV1Q6PIU1 500 aa18.48■□□□□ 0.55
DDX55-202ENST00000354291 ZFP91Q96JP5 570 aaPredicted RBP18.48■□□□□ 0.55
DDX55-202ENST00000354291 TTC14Q96N46 770 aa18.48■□□□□ 0.55
DDX55-202ENST00000354291 PLVAPQ9BX97 442 aa18.48■□□□□ 0.55
DDX55-202ENST00000354291 VAT1LQ9HCJ6 419 aa18.48■□□□□ 0.55
DDX55-202ENST00000354291 MYH7BA7E2Y1 1941 aa18.48■□□□□ 0.55
DDX55-202ENST00000354291 TTC41PQ6P2S7 1318 aa18.48■□□□□ 0.55
DDX55-202ENST00000354291 DMDP11532 3685 aa18.47■□□□□ 0.55
DDX55-202ENST00000354291 ENPP3O14638 875 aa18.47■□□□□ 0.55
DDX55-202ENST00000354291 DHX16O60231 1041 aaKnown RBP18.47■□□□□ 0.55
DDX55-202ENST00000354291 GNAT1P11488 350 aa18.47■□□□□ 0.55
DDX55-202ENST00000354291 ZBTB33Q86T24 672 aa18.47■□□□□ 0.55
DDX55-202ENST00000354291 ADGRF4Q8IZF3 695 aa18.47■□□□□ 0.55
DDX55-202ENST00000354291 SPPL3Q8TCT6 385 aa18.47■□□□□ 0.55
DDX55-202ENST00000354291 DCHS1Q96JQ0 3298 aa18.47■□□□□ 0.55
DDX55-202ENST00000354291 PROB1E7EW31 1015 aa18.46■□□□□ 0.55
DDX55-202ENST00000354291 PDGFBP01127 241 aaPredicted RBP18.46■□□□□ 0.55
DDX55-202ENST00000354291 LGALS2P05162 132 aa18.46■□□□□ 0.55
DDX55-202ENST00000354291 GHRP10912 638 aa18.46■□□□□ 0.55
DDX55-202ENST00000354291 HOXC8P31273 242 aa18.46■□□□□ 0.55
DDX55-202ENST00000354291 QRICH1Q2TAL8 776 aa18.46■□□□□ 0.55
DDX55-202ENST00000354291 ERMP1Q7Z2K6 904 aa18.46■□□□□ 0.55
DDX55-202ENST00000354291 KIAA1217Q5T5P2 1943 aa18.46■□□□□ 0.55
DDX55-202ENST00000354291 COL4A6Q14031 1691 aa18.45■□□□□ 0.54
DDX55-202ENST00000354291 NOP56O00567 594 aaKnown RBP18.45■□□□□ 0.54
DDX55-202ENST00000354291 FGAP02671 866 aa18.45■□□□□ 0.54
DDX55-202ENST00000354291 CHRNA1P02708 482 aa18.45■□□□□ 0.54
DDX55-202ENST00000354291 ITGB1P05556 798 aa18.45■□□□□ 0.54
DDX55-202ENST00000354291 UBA1P22314 1058 aaKnown RBP18.45■□□□□ 0.54
DDX55-202ENST00000354291 ICAM3P32942 547 aa18.45■□□□□ 0.54
DDX55-202ENST00000354291 HAND2P61296 217 aa18.45■□□□□ 0.54
DDX55-202ENST00000354291 ARHGAP4P98171 946 aa18.45■□□□□ 0.54
DDX55-202ENST00000354291 ALX1Q15699 326 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms