RNA–Protein interactions for RNA: ENST00000353632.6

NPHS1-201, Transcript of NPHS1, nephrin, humanhuman

TSL 5 BASIC

Gene NPHS1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-201ENST00000353632 PDXDC2PQ6P474 469 aa12.54□□□□□ -0.4
NPHS1-201ENST00000353632 FNBP4Q8N3X1 1017 aaPredicted RBP12.54□□□□□ -0.4
NPHS1-201ENST00000353632 ELAC2Q9BQ52 826 aaKnown RBP12.54□□□□□ -0.4
NPHS1-201ENST00000353632 YIPF3Q9GZM5 350 aa12.54□□□□□ -0.4
NPHS1-201ENST00000353632 DNAJC17Q9NVM6 304 aaKnown RBP12.54□□□□□ -0.4
NPHS1-201ENST00000353632 CTDP1Q9Y5B0 961 aaPredicted RBP12.54□□□□□ -0.4
NPHS1-201ENST00000353632 SETD1AO15047 1707 aaKnown RBP12.54□□□□□ -0.4
NPHS1-201ENST00000353632 NRXN3Q9Y4C0 1643 aa12.54□□□□□ -0.4
NPHS1-201ENST00000353632 FAM153BP0C7A2 387 aa12.54□□□□□ -0.4
NPHS1-201ENST00000353632 DHX9Q08211 1270 aaKnown RBP12.54□□□□□ -0.4
NPHS1-201ENST00000353632 FAM153CQ494X1 144 aa12.54□□□□□ -0.4
NPHS1-201ENST00000353632 EPN3Q9H201 632 aa12.54□□□□□ -0.4
NPHS1-201ENST00000353632 ARMCX3Q9UH62 379 aaPredicted RBP12.54□□□□□ -0.4
NPHS1-201ENST00000353632 DDX25Q9UHL0 483 aaKnown RBP12.54□□□□□ -0.4
NPHS1-201ENST00000353632 FAM153AQ9UHL3 310 aa12.54□□□□□ -0.4
NPHS1-201ENST00000353632 PCDHA6Q9UN73 950 aa12.54□□□□□ -0.4
NPHS1-201ENST00000353632 PCDHA8Q9Y5H6 950 aa12.54□□□□□ -0.4
NPHS1-201ENST00000353632 PSMD14O00487 310 aa12.54□□□□□ -0.4
NPHS1-201ENST00000353632 FAM13AO94988 1023 aa12.54□□□□□ -0.4
NPHS1-201ENST00000353632 SRGNP10124 158 aa12.54□□□□□ -0.4
NPHS1-201ENST00000353632 ACTN1P12814 892 aa12.54□□□□□ -0.4
NPHS1-201ENST00000353632 AARSP49588 968 aaKnown RBP eCLIP12.54□□□□□ -0.4
NPHS1-201ENST00000353632 MRPL12P52815 198 aaKnown RBP12.54□□□□□ -0.4
NPHS1-201ENST00000353632 GSCP56915 257 aaPredicted RBP12.54□□□□□ -0.4
NPHS1-201ENST00000353632 IFI16Q16666 785 aaKnown RBP12.54□□□□□ -0.4
NPHS1-201ENST00000353632 PNPLA7Q6ZV29 1317 aa12.54□□□□□ -0.4
NPHS1-201ENST00000353632 GMNCA6NCL1 334 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 FBXL16Q8N461 479 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 MDM1Q8TC05 714 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 MTRQ99707 1265 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 BRIP1Q9BX63 1249 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 PLA2G12BQ9BX93 195 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 LRRC27Q9C0I9 530 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 ANKRD2Q9GZV1 360 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 REXO2Q9Y3B8 237 aaKnown RBP12.53□□□□□ -0.4
NPHS1-201ENST00000353632 CRYBG1Q9Y4K1 1723 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 TARSL2A2RTX5 802 aaKnown RBP12.53□□□□□ -0.4
NPHS1-201ENST00000353632 SPDYE3A6NKU9 549 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 USP17L15C9J2P7 530 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 USP17L13C9JLJ4 530 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 USP17L11C9JVI0 530 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 USP17L18D6R9N7 530 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 USP17L22D6RA61 530 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 USP17L17D6RBQ6 530 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 USP17L19D6RCP7 530 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 USP17L20D6RJB6 530 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 GFPT2O94808 682 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 MDH1P40925 334 aaKnown RBP12.53□□□□□ -0.4
NPHS1-201ENST00000353632 FKBP3Q00688 224 aaKnown RBP12.53□□□□□ -0.4
NPHS1-201ENST00000353632 USP17L24Q0WX57 530 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 FAM83BQ5T0W9 1011 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 USP17L6PQ6QN14 398 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 PTPN22Q9Y2R2 807 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 MYMKA6NI61 221 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 PRPF6O94906 941 aaKnown RBP12.53□□□□□ -0.4
NPHS1-201ENST00000353632 STAT3P40763 770 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 IL17AQ16552 155 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 NT5DC1Q5TFE4 455 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 C3orf67Q6ZVT6 689 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 TXNRD3Q86VQ6 643 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 SPATS2Q86XZ4 545 aaKnown RBP12.53□□□□□ -0.4
NPHS1-201ENST00000353632 RETREG2Q8NC44 543 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 NSUN4Q96CB9 384 aaKnown RBP12.53□□□□□ -0.4
NPHS1-201ENST00000353632 HVCN1Q96D96 273 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 CTTNBP2NLQ9P2B4 639 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 COL4A3BPQ9Y5P4 624 aa12.53□□□□□ -0.4
NPHS1-201ENST00000353632 PLTPP55058 493 aa12.52□□□□□ -0.4
NPHS1-201ENST00000353632 SESN3P58005 492 aa12.52□□□□□ -0.4
NPHS1-201ENST00000353632 ZNF211Q13398 564 aaPredicted RBP12.52□□□□□ -0.4
NPHS1-201ENST00000353632 CCDC50Q8IVM0 306 aa12.52□□□□□ -0.4
NPHS1-201ENST00000353632 TPH2Q8IWU9 490 aa12.52□□□□□ -0.4
NPHS1-201ENST00000353632 GLIS3Q8NEA6 775 aa12.52□□□□□ -0.4
NPHS1-201ENST00000353632 PSTPIP2Q9H939 334 aa12.52□□□□□ -0.4
NPHS1-201ENST00000353632 UTP11Q9Y3A2 253 aaKnown RBP12.52□□□□□ -0.4
NPHS1-201ENST00000353632 ANKRD62A6NC57 917 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 EPHB6O15197 1021 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 GLI1P08151 1106 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 XRCC5P13010 732 aaKnown RBP12.52□□□□□ -0.41
NPHS1-201ENST00000353632 SLC8A1P32418 973 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 COPB2P35606 906 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 SP4Q02446 784 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 OTUD6AQ7L8S5 288 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 PHLDB2Q86SQ0 1253 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 MYCT1Q8N699 235 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 WDR66Q8TBY9 1149 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 MYCBPAPQ8TBZ2 947 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 CEP95Q96GE4 821 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 ATP6V1G3Q96LB4 118 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 RTCBQ9Y3I0 505 aaKnown RBP12.52□□□□□ -0.41
NPHS1-201ENST00000353632 ITIH6Q6UXX5 1313 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 POTEB3A0JP26 581 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 POTECB2RU33 542 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 ERVV-1B6SEH8 477 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 TNFAIP3P21580 790 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 CACNB3P54284 484 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 CCDC6Q16204 474 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 TTMPQ5BVD1 217 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 POTEBQ6S5H4 581 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 CAPN12Q6ZSI9 719 aa12.52□□□□□ -0.41
NPHS1-201ENST00000353632 SPICE1Q8N0Z3 855 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms