RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 C2CD5Q86YS7 1000 aa16.42■□□□□ 0.22
TRAF3-202ENST00000351691 NYXQ9GZU5 481 aa16.42■□□□□ 0.22
TRAF3-202ENST00000351691 ANKRD2Q9GZV1 360 aa16.42■□□□□ 0.22
TRAF3-202ENST00000351691 KBTBD4Q9NVX7 518 aa16.42■□□□□ 0.22
TRAF3-202ENST00000351691 NHSQ6T4R5 1651 aa16.42■□□□□ 0.22
TRAF3-202ENST00000351691 CNTNAP4Q9C0A0 1308 aa16.42■□□□□ 0.22
TRAF3-202ENST00000351691 MAST2Q6P0Q8 1798 aa16.42■□□□□ 0.22
TRAF3-202ENST00000351691 COL4A1P02462 1669 aa16.42■□□□□ 0.22
TRAF3-202ENST00000351691 CCT8L1PA6NM43 557 aa16.42■□□□□ 0.22
TRAF3-202ENST00000351691 SBK1Q52WX2 424 aa16.42■□□□□ 0.22
TRAF3-202ENST00000351691 CDCA2Q69YH5 1023 aaPredicted RBP16.42■□□□□ 0.22
TRAF3-202ENST00000351691 TMTC3Q6ZXV5 915 aa16.42■□□□□ 0.22
TRAF3-202ENST00000351691 CCDC84Q86UT8 332 aaPredicted RBP16.42■□□□□ 0.22
TRAF3-202ENST00000351691 C4orf32Q8N8J7 132 aa16.42■□□□□ 0.22
TRAF3-202ENST00000351691 ZNF483Q8TF39 744 aaPredicted RBP16.42■□□□□ 0.22
TRAF3-202ENST00000351691 MS4A14Q96JA4 679 aa16.42■□□□□ 0.22
TRAF3-202ENST00000351691 INPP4AQ96PE3 977 aaPredicted RBP16.42■□□□□ 0.22
TRAF3-202ENST00000351691 ATP8A2Q9NTI2 1148 aa16.42■□□□□ 0.22
TRAF3-202ENST00000351691 LAMB1P07942 1786 aa16.42■□□□□ 0.22
TRAF3-202ENST00000351691 SSBP05455 408 aaKnown RBP eCLIP16.41■□□□□ 0.22
TRAF3-202ENST00000351691 DYNLL1P63167 89 aaKnown RBP16.41■□□□□ 0.22
TRAF3-202ENST00000351691 ZNF844Q08AG5 666 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 TROAPQ12815 778 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 MTMR8Q96EF0 704 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 KRT12Q99456 494 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 CRNKL1Q9BZJ0 848 aaKnown RBP16.41■□□□□ 0.22
TRAF3-202ENST00000351691 SLC24A3Q9HC58 644 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 POLD4Q9HCU8 107 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 LUC7LQ9NQ29 371 aaKnown RBP16.41■□□□□ 0.22
TRAF3-202ENST00000351691 SALL4Q9UJQ4 1053 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 ESYT3A0FGR9 886 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 TRIM37O94972 964 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 CCNHP51946 323 aaPredicted RBP16.41■□□□□ 0.22
TRAF3-202ENST00000351691 MAP2K1Q02750 393 aaPredicted RBP16.41■□□□□ 0.22
TRAF3-202ENST00000351691 ITIH4Q14624 930 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 NAALADL2Q58DX5 795 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 SPDYCQ5MJ68 293 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 MEI1Q5TIA1 1274 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 PSMB7Q99436 277 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 SH3GL3Q99963 347 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 MOV10L1Q9BXT6 1211 aaKnown RBP16.41■□□□□ 0.22
TRAF3-202ENST00000351691 CCSER1Q9C0I3 900 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 SPATS2LQ9NUQ6 558 aaKnown RBP16.41■□□□□ 0.22
TRAF3-202ENST00000351691 SLC12A4Q9UP95 1085 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 C15orf41Q9Y2V0 281 aa16.41■□□□□ 0.22
TRAF3-202ENST00000351691 ZSCAN5CA6NGD5 496 aaPredicted RBP16.4■□□□□ 0.22
TRAF3-202ENST00000351691 BUB1BO60566 1050 aaPredicted RBP16.4■□□□□ 0.22
TRAF3-202ENST00000351691 UAP1Q16222 522 aaPredicted RBP16.4■□□□□ 0.22
TRAF3-202ENST00000351691 NSUN4Q96CB9 384 aaKnown RBP16.4■□□□□ 0.22
TRAF3-202ENST00000351691 V9GY48 417 aaPredicted RBP16.4■□□□□ 0.22
TRAF3-202ENST00000351691 ASAP2O43150 1006 aa16.39■□□□□ 0.22
TRAF3-202ENST00000351691 RAD51CO43502 376 aa16.39■□□□□ 0.22
TRAF3-202ENST00000351691 ECHS1P30084 290 aa16.39■□□□□ 0.22
TRAF3-202ENST00000351691 KCNQ4P56696 695 aa16.39■□□□□ 0.22
TRAF3-202ENST00000351691 VWA3BQ502W6 1294 aa16.39■□□□□ 0.22
TRAF3-202ENST00000351691 ANKRD40Q6AI12 368 aa16.39■□□□□ 0.22
TRAF3-202ENST00000351691 CPLX4Q7Z7G2 160 aa16.39■□□□□ 0.22
TRAF3-202ENST00000351691 USP38Q8NB14 1042 aa16.39■□□□□ 0.22
TRAF3-202ENST00000351691 CCDC197Q8NCU1 140 aa16.39■□□□□ 0.22
TRAF3-202ENST00000351691 SYN2Q92777 582 aaPredicted RBP16.39■□□□□ 0.22
TRAF3-202ENST00000351691 NUCKS1Q9H1E3 243 aaKnown RBP16.39■□□□□ 0.22
TRAF3-202ENST00000351691 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.39■□□□□ 0.22
TRAF3-202ENST00000351691 PCDHGC5Q9Y5F6 944 aa16.39■□□□□ 0.22
TRAF3-202ENST00000351691 BAZ2AQ9UIF9 1905 aaKnown RBP16.39■□□□□ 0.21
TRAF3-202ENST00000351691 OPLAHO14841 1288 aa16.39■□□□□ 0.21
TRAF3-202ENST00000351691 ALADP13716 330 aa16.39■□□□□ 0.21
TRAF3-202ENST00000351691 HOXA7P31268 230 aaPredicted RBP16.39■□□□□ 0.21
TRAF3-202ENST00000351691 ADCY2Q08462 1091 aa16.39■□□□□ 0.21
TRAF3-202ENST00000351691 NAB2Q15742 525 aa16.39■□□□□ 0.21
TRAF3-202ENST00000351691 RC3H1Q5TC82 1133 aaKnown RBP16.39■□□□□ 0.21
TRAF3-202ENST00000351691 C3orf67Q6ZVT6 689 aa16.39■□□□□ 0.21
TRAF3-202ENST00000351691 ANKS4BQ8N8V4 417 aa16.39■□□□□ 0.21
TRAF3-202ENST00000351691 TCP11Q8WWU5 503 aa16.39■□□□□ 0.21
TRAF3-202ENST00000351691 CHMP6Q96FZ7 201 aa16.39■□□□□ 0.21
TRAF3-202ENST00000351691 ARPP21Q9UBL0 812 aaPredicted RBP16.39■□□□□ 0.21
TRAF3-202ENST00000351691 TRPC6Q9Y210 931 aa16.39■□□□□ 0.21
TRAF3-202ENST00000351691 KIAA1551Q9HCM1 1747 aa16.39■□□□□ 0.21
TRAF3-202ENST00000351691 USP17L12C9JPN9 530 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 USP17L21D6R901 530 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 PRDM1O75626 825 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 CTNNA1P35221 906 aaKnown RBP16.38■□□□□ 0.21
TRAF3-202ENST00000351691 RPS8P62241 208 aaKnown RBP16.38■□□□□ 0.21
TRAF3-202ENST00000351691 ERMARDQ5T6L9 678 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 PDXDC1Q6P996 788 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 CCDC63Q8NA47 563 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 LINC00116Q8NCU8 138 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 NSMCE1Q8WV22 266 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 BAP1Q92560 729 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 CALR3Q96L12 384 aaKnown RBP16.38■□□□□ 0.21
TRAF3-202ENST00000351691 SPAG5Q96R06 1193 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 TRPC5Q9UL62 973 aaPredicted RBP16.38■□□□□ 0.21
TRAF3-202ENST00000351691 COL24A1Q17RW2 1714 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 CNTNAP5Q8WYK1 1306 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 F8W031 263 aaPredicted RBP16.38■□□□□ 0.21
TRAF3-202ENST00000351691 PPP1R12BO60237 982 aaPredicted RBP16.38■□□□□ 0.21
TRAF3-202ENST00000351691 PLEKHA8P1O95397 391 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 HIBADHP31937 336 aaKnown RBP16.38■□□□□ 0.21
TRAF3-202ENST00000351691 MCM7P33993 719 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 GCKP35557 465 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 RASSF7Q02833 373 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms