RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 NSMFQ6X4W1 530 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 UNC13DQ70J99 1090 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 DNAAF5Q86Y56 855 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 PLEKHA4Q9H4M7 779 aa15.41■□□□□ 0.06
TRIM4-201ENST00000349062 EPN1Q9Y6I3 576 aaPredicted RBP15.41■□□□□ 0.06
TRIM4-201ENST00000349062 WNT10BO00744 389 aa15.4■□□□□ 0.06
TRIM4-201ENST00000349062 SRGAP2O75044 1071 aa15.4■□□□□ 0.06
TRIM4-201ENST00000349062 TATDN1Q6P1N9 297 aa15.4■□□□□ 0.06
TRIM4-201ENST00000349062 C10orf67Q8IYJ2 551 aa15.4■□□□□ 0.06
TRIM4-201ENST00000349062 RAVER2Q9HCJ3 691 aaKnown RBP15.4■□□□□ 0.06
TRIM4-201ENST00000349062 FHOD1Q9Y613 1164 aa15.4■□□□□ 0.06
TRIM4-201ENST00000349062 SMARCA1P28370 1054 aa15.4■□□□□ 0.06
TRIM4-201ENST00000349062 LMAN1P49257 510 aa15.4■□□□□ 0.06
TRIM4-201ENST00000349062 FXR2P51116 673 aaKnown RBP eCLIP15.4■□□□□ 0.06
TRIM4-201ENST00000349062 R3HDM1Q15032 1099 aaKnown RBP15.4■□□□□ 0.06
TRIM4-201ENST00000349062 KCTD19Q17RG1 926 aaPredicted RBP15.4■□□□□ 0.06
TRIM4-201ENST00000349062 PANX2Q96RD6 677 aa15.4■□□□□ 0.06
TRIM4-201ENST00000349062 DNM3Q9UQ16 869 aa15.4■□□□□ 0.06
TRIM4-201ENST00000349062 CDK5RAP2Q96SN8 1893 aa15.4■□□□□ 0.06
TRIM4-201ENST00000349062 EML1O00423 815 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 GCNT3O95395 438 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 PLA2G4AP47712 749 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 CASP5P51878 434 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 RTKN2Q8IZC4 609 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.39■□□□□ 0.05
TRIM4-201ENST00000349062 GOPCQ9HD26 462 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 CCPG1Q9ULG6 757 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 MSH4O15457 936 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 AKR1B10O60218 316 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 DNM2P50570 870 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 KCNA1Q09470 495 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 SFR1Q86XK3 245 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 BANK1Q8NDB2 785 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 ZNRF3Q9ULT6 936 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 PCDHB13Q9Y5F0 798 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 ECM2O94769 699 aaPredicted RBP15.39■□□□□ 0.05
TRIM4-201ENST00000349062 INPP5BP32019 993 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 LRCH2Q5VUJ6 765 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 TMTC1Q8IUR5 882 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 CCDC65Q8IXS2 484 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 NDST4Q9H3R1 872 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 THAP9Q9H5L6 903 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 PIM2Q9P1W9 311 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 STK17AQ9UEE5 414 aa15.39■□□□□ 0.05
TRIM4-201ENST00000349062 hCG_1984214I3L0E3 225 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 FLOT1O75955 427 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 CLSTN1O94985 981 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 EEF1GP26641 437 aaKnown RBP15.38■□□□□ 0.05
TRIM4-201ENST00000349062 OAS2P29728 719 aaKnown RBP15.38■□□□□ 0.05
TRIM4-201ENST00000349062 PBX1P40424 430 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 MATR3P43243 847 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRIM4-201ENST00000349062 CIAPIN1Q6FI81 312 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 PPP4R3AQ6IN85 833 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 ZNF713Q8N859 430 aaPredicted RBP15.38■□□□□ 0.05
TRIM4-201ENST00000349062 CUEDC2Q9H467 287 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 GCOM1H8Y6P7 765 aaPredicted RBP15.38■□□□□ 0.05
TRIM4-201ENST00000349062 ENTPD3O75355 529 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 NDUFA10O95299 355 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 POLR2MP0CAP2 368 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 EIF2AK2P19525 551 aaKnown RBP15.38■□□□□ 0.05
TRIM4-201ENST00000349062 FAM114A1Q8IWE2 563 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 HOOK2Q96ED9 719 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 CCDC42Q96M95 316 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 TCEAL9Q9UHQ7 104 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 TMEM150BA6NC51 233 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 GAS7O60861 476 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 FAM151AQ8WW52 585 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 DYDC2Q96IM9 177 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 TAOK3Q9H2K8 898 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 EMILIN3Q9NT22 766 aa15.38■□□□□ 0.05
TRIM4-201ENST00000349062 TBCAO75347 108 aaKnown RBP15.37■□□□□ 0.05
TRIM4-201ENST00000349062 MYBP10242 640 aa15.37■□□□□ 0.05
TRIM4-201ENST00000349062 NOVP48745 357 aa15.37■□□□□ 0.05
TRIM4-201ENST00000349062 CLK2P49760 499 aaKnown RBP15.37■□□□□ 0.05
TRIM4-201ENST00000349062 ADAM9Q13443 819 aa15.37■□□□□ 0.05
TRIM4-201ENST00000349062 DALRD3Q5D0E6 543 aaKnown RBP15.37■□□□□ 0.05
TRIM4-201ENST00000349062 LDHDQ86WU2 507 aa15.37■□□□□ 0.05
TRIM4-201ENST00000349062 MYCT1Q8N699 235 aa15.37■□□□□ 0.05
TRIM4-201ENST00000349062 ERMNQ8TAM6 284 aa15.37■□□□□ 0.05
TRIM4-201ENST00000349062 ZKSCAN4Q969J2 545 aaPredicted RBP15.37■□□□□ 0.05
TRIM4-201ENST00000349062 MYH4Q9Y623 1939 aa15.37■□□□□ 0.05
TRIM4-201ENST00000349062 NFIBO00712 420 aa15.37■□□□□ 0.05
TRIM4-201ENST00000349062 PEX10O60683 326 aa15.37■□□□□ 0.05
TRIM4-201ENST00000349062 ARP10275 920 aa15.37■□□□□ 0.05
TRIM4-201ENST00000349062 HMGB2P26583 209 aaKnown RBP15.37■□□□□ 0.05
TRIM4-201ENST00000349062 HDLBPQ00341 1268 aaKnown RBP15.37■□□□□ 0.05
TRIM4-201ENST00000349062 PDIA5Q14554 519 aa15.37■□□□□ 0.05
TRIM4-201ENST00000349062 ZC2HC1CQ53FD0 456 aaPredicted RBP15.37■□□□□ 0.05
TRIM4-201ENST00000349062 CCDC43Q96MW1 224 aaKnown RBP15.37■□□□□ 0.05
TRIM4-201ENST00000349062 GDAP1L1Q96MZ0 367 aa15.37■□□□□ 0.05
TRIM4-201ENST00000349062 REEP2Q9BRK0 252 aa15.37■□□□□ 0.05
TRIM4-201ENST00000349062 MYOZ2Q9NPC6 264 aa15.37■□□□□ 0.05
TRIM4-201ENST00000349062 PLIN4Q96Q06 1357 aa15.37■□□□□ 0.05
TRIM4-201ENST00000349062 COL11A2P13942 1736 aaPredicted RBP15.37■□□□□ 0.05
TRIM4-201ENST00000349062 OPLAHO14841 1288 aa15.36■□□□□ 0.05
TRIM4-201ENST00000349062 PHACTR2O75167 634 aa15.36■□□□□ 0.05
TRIM4-201ENST00000349062 CAPN2P17655 700 aa15.36■□□□□ 0.05
TRIM4-201ENST00000349062 CYP11B2P19099 503 aa15.36■□□□□ 0.05
TRIM4-201ENST00000349062 RNASE9P60153 205 aaKnown RBP15.36■□□□□ 0.05
TRIM4-201ENST00000349062 POLR2FP61218 127 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms