RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 PCDHA2Q9Y5H9 948 aa22.63■■□□□ 1.21
CHRNA3-202ENST00000348639 ASTN2O75129 1339 aaPredicted RBP22.62■■□□□ 1.21
CHRNA3-202ENST00000348639 CASQ1P31415 396 aa22.62■■□□□ 1.21
CHRNA3-202ENST00000348639 NAA30Q147X3 362 aaPredicted RBP22.62■■□□□ 1.21
CHRNA3-202ENST00000348639 FKBP15Q5T1M5 1219 aa22.62■■□□□ 1.21
CHRNA3-202ENST00000348639 LRRC55Q6ZSA7 311 aa22.62■■□□□ 1.21
CHRNA3-202ENST00000348639 WDR24Q96S15 920 aa22.62■■□□□ 1.21
CHRNA3-202ENST00000348639 DNM3Q9UQ16 869 aa22.62■■□□□ 1.21
CHRNA3-202ENST00000348639 CD2APQ9Y5K6 639 aa22.62■■□□□ 1.21
CHRNA3-202ENST00000348639 FRMD3A2A2Y4 597 aa22.62■■□□□ 1.21
CHRNA3-202ENST00000348639 KIF4BQ2VIQ3 1234 aa22.62■■□□□ 1.21
CHRNA3-202ENST00000348639 ZCWPW2Q504Y3 356 aa22.62■■□□□ 1.21
CHRNA3-202ENST00000348639 TEPSINQ96N21 525 aa22.62■■□□□ 1.21
CHRNA3-202ENST00000348639 CNOT7Q9UIV1 285 aaKnown RBP22.62■■□□□ 1.21
CHRNA3-202ENST00000348639 ARSHQ5FYA8 562 aa22.61■■□□□ 1.21
CHRNA3-202ENST00000348639 FIGNQ5HY92 759 aa22.61■■□□□ 1.21
CHRNA3-202ENST00000348639 KCTD17Q8N5Z5 321 aa22.61■■□□□ 1.21
CHRNA3-202ENST00000348639 POLR3CQ9BUI4 534 aaPredicted RBP22.61■■□□□ 1.21
CHRNA3-202ENST00000348639 EHMT1Q9H9B1 1298 aa22.61■■□□□ 1.21
CHRNA3-202ENST00000348639 NPHP3-ACAD11A0A0J9YXS1 232 aa22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 RASSF10A6NK89 507 aa22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 TRIM21P19474 475 aaKnown RBP22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 PTGER2P43116 358 aa22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 TSR1Q2NL82 804 aaKnown RBP22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 VWA3BQ502W6 1294 aa22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 LDHDQ86WU2 507 aa22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 SYT2Q8N9I0 419 aaPredicted RBP22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 IQCDQ96DY2 449 aa22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 NKRFO15226 690 aaKnown RBP eCLIP22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 URI1O94763 535 aaPredicted RBP22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 MAN2A1Q16706 1144 aa22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 HERC4Q5GLZ8 1057 aaPredicted RBP22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 DEFB129Q9H1M3 183 aa22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 LZTFL1Q9NQ48 299 aa22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 HACL1Q9UJ83 578 aa22.6■■□□□ 1.21
CHRNA3-202ENST00000348639 A0A1W2PQJ5 194 aa22.59■■□□□ 1.21
CHRNA3-202ENST00000348639 KIF20AO95235 890 aa22.59■■□□□ 1.21
CHRNA3-202ENST00000348639 KRT18P05783 430 aaKnown RBP22.59■■□□□ 1.21
CHRNA3-202ENST00000348639 PRELPP51888 382 aa22.59■■□□□ 1.21
CHRNA3-202ENST00000348639 PSMC6P62333 389 aa22.59■■□□□ 1.21
CHRNA3-202ENST00000348639 FKBP3Q00688 224 aaKnown RBP22.59■■□□□ 1.21
CHRNA3-202ENST00000348639 ACRBPQ8NEB7 543 aa22.59■■□□□ 1.21
CHRNA3-202ENST00000348639 CHP1Q99653 195 aa22.59■■□□□ 1.21
CHRNA3-202ENST00000348639 SGIP1Q9BQI5 828 aa22.59■■□□□ 1.21
CHRNA3-202ENST00000348639 WDR18Q9BV38 432 aa22.59■■□□□ 1.21
CHRNA3-202ENST00000348639 NDST4Q9H3R1 872 aa22.59■■□□□ 1.21
CHRNA3-202ENST00000348639 MEIS1O00470 390 aa22.58■■□□□ 1.21
CHRNA3-202ENST00000348639 ZBED6P86452 979 aa22.58■■□□□ 1.21
CHRNA3-202ENST00000348639 MEA1Q16626 185 aa22.58■■□□□ 1.21
CHRNA3-202ENST00000348639 PDCL2Q8N4E4 241 aa22.58■■□□□ 1.21
CHRNA3-202ENST00000348639 EIF2AK1Q9BQI3 630 aaKnown RBP22.58■■□□□ 1.21
CHRNA3-202ENST00000348639 FGFBP2Q9BYJ0 223 aa22.58■■□□□ 1.21
CHRNA3-202ENST00000348639 GINM1Q9NU53 330 aa22.58■■□□□ 1.21
CHRNA3-202ENST00000348639 TBC1D7Q9P0N9 293 aa22.58■■□□□ 1.21
CHRNA3-202ENST00000348639 KLK7P49862 253 aa22.58■■□□□ 1.2
CHRNA3-202ENST00000348639 PABPC4Q13310 644 aaKnown RBP eCLIP22.58■■□□□ 1.2
CHRNA3-202ENST00000348639 WDR59Q6PJI9 974 aa22.58■■□□□ 1.2
CHRNA3-202ENST00000348639 AGPAT5Q9NUQ2 364 aa22.58■■□□□ 1.2
CHRNA3-202ENST00000348639 EPN1Q9Y6I3 576 aaPredicted RBP22.58■■□□□ 1.2
CHRNA3-202ENST00000348639 A0A0U1RQJ8 604 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 FZD9O00144 591 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 EML1O00423 815 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 KIF5CO60282 957 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 INPP5BP32019 993 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 CACNB1Q02641 598 aaPredicted RBP22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 GIT2Q14161 759 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 OTOP1Q7RTM1 612 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 ATRIPQ8WXE1 791 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 LPAR1Q92633 364 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 SLC5A5Q92911 643 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 PCMTD1Q96MG8 357 aaPredicted RBP22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 LTBP3Q9NS15 1303 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 WDR46O15213 610 aaKnown RBP22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 PSMD10O75832 226 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 NDUFA10O95299 355 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 ICAM1P05362 532 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 UBXN2AP68543 259 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 MAP3K9P80192 1104 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 RAD51AP2Q09MP3 1159 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 PPP2R5CQ13362 524 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 CEP55Q53EZ4 464 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 NLGN2Q8NFZ4 835 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 SCFD1Q8WVM8 642 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 CEP63Q96MT8 703 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 IRX2Q9BZI1 471 aaPredicted RBP22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 KIAA1683Q9H0B3 1180 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 EMILIN3Q9NT22 766 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 SIK3Q9Y2K2 1263 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 ATAD5Q96QE3 1844 aa22.57■■□□□ 1.2
CHRNA3-202ENST00000348639 DGKZQ13574 1117 aa22.56■■□□□ 1.2
CHRNA3-202ENST00000348639 ARHGAP29Q52LW3 1261 aa22.56■■□□□ 1.2
CHRNA3-202ENST00000348639 LRCH2Q5VUJ6 765 aa22.56■■□□□ 1.2
CHRNA3-202ENST00000348639 PRPF38AQ8NAV1 312 aaKnown RBP22.56■■□□□ 1.2
CHRNA3-202ENST00000348639 ZNF397Q8NF99 534 aaPredicted RBP22.56■■□□□ 1.2
CHRNA3-202ENST00000348639 HSD17B14Q9BPX1 270 aa22.56■■□□□ 1.2
CHRNA3-202ENST00000348639 SLF1Q9BQI6 1058 aa22.56■■□□□ 1.2
CHRNA3-202ENST00000348639 KCTD10Q9H3F6 313 aa22.56■■□□□ 1.2
CHRNA3-202ENST00000348639 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.56■■□□□ 1.2
CHRNA3-202ENST00000348639 COL4A3BPQ9Y5P4 624 aa22.56■■□□□ 1.2
CHRNA3-202ENST00000348639 V9GYY5 206 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms