RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 LINC00271P0C7V0 271 aa11.21□□□□□ -0.61
MRPL55-204ENST00000348259 PCP11498 1178 aaKnown RBP11.21□□□□□ -0.61
MRPL55-204ENST00000348259 MCM5P33992 734 aa11.21□□□□□ -0.61
MRPL55-204ENST00000348259 PTK7Q13308 1070 aa11.21□□□□□ -0.61
MRPL55-204ENST00000348259 ME3Q16798 604 aa11.21□□□□□ -0.61
MRPL55-204ENST00000348259 LY6KQ17RY6 165 aa11.21□□□□□ -0.61
MRPL55-204ENST00000348259 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.21□□□□□ -0.61
MRPL55-204ENST00000348259 MB21D2Q8IYB1 491 aaPredicted RBP11.21□□□□□ -0.61
MRPL55-204ENST00000348259 SYTL5Q8TDW5 730 aaPredicted RBP11.21□□□□□ -0.61
MRPL55-204ENST00000348259 ZNF274Q96GC6 653 aaPredicted RBP11.21□□□□□ -0.61
MRPL55-204ENST00000348259 C17orf80Q9BSJ5 609 aa11.21□□□□□ -0.61
MRPL55-204ENST00000348259 CNNM2Q9H8M5 875 aa11.21□□□□□ -0.61
MRPL55-204ENST00000348259 DDX41Q9UJV9 622 aaKnown RBP11.21□□□□□ -0.61
MRPL55-204ENST00000348259 LGR5O75473 907 aa11.2□□□□□ -0.62
MRPL55-204ENST00000348259 RGS20O76081 388 aa11.2□□□□□ -0.62
MRPL55-204ENST00000348259 KCNA5P22460 613 aa11.2□□□□□ -0.62
MRPL55-204ENST00000348259 PSEN2P49810 448 aa11.2□□□□□ -0.62
MRPL55-204ENST00000348259 NHLH1Q02575 133 aa11.2□□□□□ -0.62
MRPL55-204ENST00000348259 ZP2Q05996 745 aa11.2□□□□□ -0.62
MRPL55-204ENST00000348259 TRDNQ13061 729 aa11.2□□□□□ -0.62
MRPL55-204ENST00000348259 COL9A3Q14050 684 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-204ENST00000348259 ZNF618Q5T7W0 954 aa11.2□□□□□ -0.62
MRPL55-204ENST00000348259 PTCRAQ6ISU1 281 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-204ENST00000348259 Q6ZUG5 572 aa11.2□□□□□ -0.62
MRPL55-204ENST00000348259 MRPL38Q96DV4 380 aaKnown RBP11.2□□□□□ -0.62
MRPL55-204ENST00000348259 TAAR1Q96RJ0 339 aa11.2□□□□□ -0.62
MRPL55-204ENST00000348259 KCNH6Q9H252 994 aa11.2□□□□□ -0.62
MRPL55-204ENST00000348259 MTUS1Q9ULD2 1270 aa11.2□□□□□ -0.62
MRPL55-204ENST00000348259 MTMR7Q9Y216 660 aa11.2□□□□□ -0.62
MRPL55-204ENST00000348259 NOD1Q9Y239 953 aa11.2□□□□□ -0.62
MRPL55-204ENST00000348259 KMT2EQ8IZD2 1858 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 DOCK5Q9H7D0 1870 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 KIAA1671Q9BY89 1806 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 OPLAHO14841 1288 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 PFKFB2O60825 505 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 ALADP13716 330 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 LTBRP36941 435 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 MRE11P49959 708 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 ZNF200P98182 395 aaPredicted RBP11.19□□□□□ -0.62
MRPL55-204ENST00000348259 CTC1Q2NKJ3 1217 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 PLEKHG4Q58EX7 1191 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 RALYLQ86SE5 291 aaKnown RBP11.19□□□□□ -0.62
MRPL55-204ENST00000348259 SERINC5Q86VE9 423 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 PPTC7Q8NI37 304 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 TNPO1Q92973 898 aaKnown RBP11.19□□□□□ -0.62
MRPL55-204ENST00000348259 IWS1Q96ST2 819 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 MPHOSPH6Q99547 160 aaKnown RBP11.19□□□□□ -0.62
MRPL55-204ENST00000348259 LLPHQ9BRT6 129 aaKnown RBP11.19□□□□□ -0.62
MRPL55-204ENST00000348259 ZBED2Q9BTP6 218 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 OSBPL7Q9BZF2 842 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 KRT23Q9C075 422 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 CPVLQ9H3G5 476 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 RNF41Q9H4P4 317 aaPredicted RBP11.19□□□□□ -0.62
MRPL55-204ENST00000348259 FOXD4L1Q9NU39 408 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 INSL6Q9Y581 213 aa11.19□□□□□ -0.62
MRPL55-204ENST00000348259 CACNA1HO95180 2353 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.18□□□□□ -0.62
MRPL55-204ENST00000348259 H3BNC9 293 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 DCXO43602 365 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 BRD1O95696 1058 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 PTMSP20962 102 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 HAND2P61296 217 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 IKBKEQ14164 716 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 MFSD10Q14728 455 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 DGKDQ16760 1214 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 PUS10Q3MIT2 529 aaKnown RBP11.18□□□□□ -0.62
MRPL55-204ENST00000348259 EPC2Q52LR7 807 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 GPATCH4Q5T3I0 446 aaKnown RBP11.18□□□□□ -0.62
MRPL55-204ENST00000348259 TBC1D10CQ8IV04 446 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 FBXO22Q8NEZ5 403 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 DBF4BQ8NFT6 615 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 GTF3C6Q969F1 213 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 PABPC5Q96DU9 382 aaKnown RBP11.18□□□□□ -0.62
MRPL55-204ENST00000348259 TMEM87BQ96K49 555 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 FBXL18Q96ME1 805 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 SAMD11Q96NU1 681 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 GBP4Q96PP9 640 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 RC3H2Q9HBD1 1191 aaKnown RBP11.18□□□□□ -0.62
MRPL55-204ENST00000348259 PRKAG3Q9UGI9 489 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 SMC3Q9UQE7 1217 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 TTC3P53804 2025 aa11.18□□□□□ -0.62
MRPL55-204ENST00000348259 ABCB11O95342 1321 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 EMSYQ7Z589 1322 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 B4DLN1 442 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 PRC1O43663 620 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 LARGE1O95461 756 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 ZNF286BP0CG31 522 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 MCM4P33991 863 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 LIFRP42702 1097 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 MRPL12P52815 198 aaKnown RBP11.17□□□□□ -0.62
MRPL55-204ENST00000348259 ANTXR2P58335 489 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 FGD1P98174 961 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 ST3GAL1Q11201 340 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 STXBP2Q15833 593 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 KIAA0753Q2KHM9 967 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 TIGD5Q53EQ6 642 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 MYSM1Q5VVJ2 828 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 MFSD6Q6ZSS7 791 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 SEPT14Q6ZU15 432 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 NSUN6Q8TEA1 469 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms