RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 TUFT1Q9NNX1 390 aa20.89■□□□□ 0.93
PTN-201ENST00000348225 KLRC4O43908 158 aa20.88■□□□□ 0.93
PTN-201ENST00000348225 RHOBTB3O94955 611 aa20.88■□□□□ 0.93
PTN-201ENST00000348225 ZBTB48P10074 688 aaPredicted RBP20.88■□□□□ 0.93
PTN-201ENST00000348225 KMT5BQ4FZB7 885 aa20.88■□□□□ 0.93
PTN-201ENST00000348225 CNNM4Q6P4Q7 775 aa20.88■□□□□ 0.93
PTN-201ENST00000348225 KCNK18Q7Z418 384 aa20.88■□□□□ 0.93
PTN-201ENST00000348225 ENOX1Q8TC92 643 aaKnown RBP20.88■□□□□ 0.93
PTN-201ENST00000348225 PURBQ96QR8 312 aaKnown RBP20.88■□□□□ 0.93
PTN-201ENST00000348225 IWS1Q96ST2 819 aa20.88■□□□□ 0.93
PTN-201ENST00000348225 MOV10L1Q9BXT6 1211 aaKnown RBP20.88■□□□□ 0.93
PTN-201ENST00000348225 TRIM5Q9C035 493 aa20.88■□□□□ 0.93
PTN-201ENST00000348225 BMP2KQ9NSY1 1161 aaPredicted RBP20.88■□□□□ 0.93
PTN-201ENST00000348225 TBC1D22BQ9NU19 505 aa20.88■□□□□ 0.93
PTN-201ENST00000348225 EXOC1Q9NV70 894 aa20.88■□□□□ 0.93
PTN-201ENST00000348225 DNM3Q9UQ16 869 aa20.88■□□□□ 0.93
PTN-201ENST00000348225 POTEFA5A3E0 1075 aa20.87■□□□□ 0.93
PTN-201ENST00000348225 EML1O00423 815 aa20.87■□□□□ 0.93
PTN-201ENST00000348225 AP5Z1O43299 807 aa20.87■□□□□ 0.93
PTN-201ENST00000348225 CHMP2AO43633 222 aa20.87■□□□□ 0.93
PTN-201ENST00000348225 MUTP22033 750 aa20.87■□□□□ 0.93
PTN-201ENST00000348225 POTEGQ6S5H5 508 aa20.87■□□□□ 0.93
PTN-201ENST00000348225 NEK9Q8TD19 979 aa20.87■□□□□ 0.93
PTN-201ENST00000348225 GPRASP2Q96D09 838 aa20.87■□□□□ 0.93
PTN-201ENST00000348225 UNC45AQ9H3U1 944 aa20.87■□□□□ 0.93
PTN-201ENST00000348225 CCL15-CCL14A0A0B4J2E2 113 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 PVALEFA0A1B0GWK0 134 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 TESPA1A2RU30 521 aaPredicted RBP20.86■□□□□ 0.93
PTN-201ENST00000348225 MYMKA6NI61 221 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 MAFGO15525 162 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 PLA2G4BP0C869 781 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 SPATA31C1P0DKV0 1188 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 STIM1Q13586 685 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 EPHA7Q15375 998 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 CCL15Q16663 113 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 B3GNT9Q6UX72 402 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.86■□□□□ 0.93
PTN-201ENST00000348225 MS4A4AQ96JQ5 239 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 RBPJLQ9UBG7 517 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 TCEAL9Q9UHQ7 104 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 LCTP09848 1927 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 E9PMD0 336 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 SSBP05455 408 aaKnown RBP eCLIP20.86■□□□□ 0.93
PTN-201ENST00000348225 ERCC3P19447 782 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 PPP1R2P41236 205 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 SPRYD7Q5W111 196 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 UNC13DQ70J99 1090 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 ANKRD23Q86SG2 305 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 CDHR1Q96JP9 859 aa20.86■□□□□ 0.93
PTN-201ENST00000348225 ADD3Q9UEY8 706 aaKnown RBP20.86■□□□□ 0.93
PTN-201ENST00000348225 SYNRGQ9UMZ2 1314 aa20.85■□□□□ 0.93
PTN-201ENST00000348225 PPP1R3GB7ZBB8 358 aa20.85■□□□□ 0.93
PTN-201ENST00000348225 POTEB2H3BUK9 544 aa20.85■□□□□ 0.93
PTN-201ENST00000348225 PEX10O60683 326 aa20.85■□□□□ 0.93
PTN-201ENST00000348225 ITGBL1O95965 494 aaPredicted RBP20.85■□□□□ 0.93
PTN-201ENST00000348225 CYP4A11Q02928 519 aa20.85■□□□□ 0.93
PTN-201ENST00000348225 PDE4DQ08499 809 aa20.85■□□□□ 0.93
PTN-201ENST00000348225 GNPTABQ3T906 1256 aa20.85■□□□□ 0.93
PTN-201ENST00000348225 KLHL10Q6JEL2 608 aa20.85■□□□□ 0.93
PTN-201ENST00000348225 SMYD4Q8IYR2 804 aaPredicted RBP20.85■□□□□ 0.93
PTN-201ENST00000348225 GIMAP8Q8ND71 665 aaPredicted RBP20.85■□□□□ 0.93
PTN-201ENST00000348225 SMCR8Q8TEV9 937 aaPredicted RBP20.85■□□□□ 0.93
PTN-201ENST00000348225 INPP4AQ96PE3 977 aaPredicted RBP20.85■□□□□ 0.93
PTN-201ENST00000348225 HSD17B14Q9BPX1 270 aa20.85■□□□□ 0.93
PTN-201ENST00000348225 TXNRD2Q9NNW7 524 aa20.85■□□□□ 0.93
PTN-201ENST00000348225 PKD2L1Q9P0L9 805 aa20.85■□□□□ 0.93
PTN-201ENST00000348225 PDHXO00330 501 aa20.84■□□□□ 0.93
PTN-201ENST00000348225 CD44P16070 742 aaKnown RBP20.84■□□□□ 0.93
PTN-201ENST00000348225 ZNF75DP51815 510 aa20.84■□□□□ 0.93
PTN-201ENST00000348225 MKRN3Q13064 507 aaKnown RBP20.84■□□□□ 0.93
PTN-201ENST00000348225 ITGB3BPQ13352 177 aaPredicted RBP20.84■□□□□ 0.93
PTN-201ENST00000348225 CST9Q5W186 159 aa20.84■□□□□ 0.93
PTN-201ENST00000348225 MIER3Q7Z3K6 550 aa20.84■□□□□ 0.93
PTN-201ENST00000348225 DDX12PQ92771 950 aa20.84■□□□□ 0.93
PTN-201ENST00000348225 DYDC2Q96IM9 177 aa20.84■□□□□ 0.93
PTN-201ENST00000348225 MROH8Q9H579 483 aa20.84■□□□□ 0.93
PTN-201ENST00000348225 B4DLN1 442 aa20.83■□□□□ 0.93
PTN-201ENST00000348225 BTBD19C9JJ37 291 aa20.83■□□□□ 0.93
PTN-201ENST00000348225 DDX39AO00148 427 aaKnown RBP20.83■□□□□ 0.93
PTN-201ENST00000348225 DHX15O43143 795 aaKnown RBP20.83■□□□□ 0.93
PTN-201ENST00000348225 ERVK-9P63128 1117 aa20.83■□□□□ 0.93
PTN-201ENST00000348225 ERVK-24P63145 666 aa20.83■□□□□ 0.93
PTN-201ENST00000348225 PAK1Q13153 545 aa20.83■□□□□ 0.93
PTN-201ENST00000348225 DYMQ7RTS9 669 aa20.83■□□□□ 0.93
PTN-201ENST00000348225 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.83■□□□□ 0.93
PTN-201ENST00000348225 GPBP1Q86WP2 473 aa20.83■□□□□ 0.93
PTN-201ENST00000348225 SHCBP1Q8NEM2 672 aa20.83■□□□□ 0.93
PTN-201ENST00000348225 BRI3BPQ8WY22 251 aa20.83■□□□□ 0.93
PTN-201ENST00000348225 MPHOSPH6Q99547 160 aaKnown RBP20.83■□□□□ 0.93
PTN-201ENST00000348225 RGL1Q9NZL6 768 aa20.83■□□□□ 0.93
PTN-201ENST00000348225 RWDD2AQ9UIY3 292 aa20.83■□□□□ 0.93
PTN-201ENST00000348225 CTNND2Q9UQB3 1225 aa20.83■□□□□ 0.93
PTN-201ENST00000348225 GDAQ9Y2T3 454 aa20.83■□□□□ 0.93
PTN-201ENST00000348225 NFE2L3Q9Y4A8 694 aa20.83■□□□□ 0.93
PTN-201ENST00000348225 SLITRK3O94933 977 aa20.82■□□□□ 0.92
PTN-201ENST00000348225 EYA4O95677 639 aa20.82■□□□□ 0.92
PTN-201ENST00000348225 PTMAP06454 111 aaKnown RBP20.82■□□□□ 0.92
PTN-201ENST00000348225 ALDH5A1P51649 535 aaPredicted RBP20.82■□□□□ 0.92
PTN-201ENST00000348225 SLC12A3P55017 1021 aa20.82■□□□□ 0.92
PTN-201ENST00000348225 HUNKP57058 714 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms