RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 GIPC2Q8TF65 315 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 THRAP3Q9Y2W1 955 aaKnown RBP12.76□□□□□ -0.37
TRAF3-201ENST00000347662 CPP00450 1065 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 CAPZA2P47755 286 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 SPOPLQ6IQ16 392 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 TRIM8Q9BZR9 551 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 LEMD3Q9Y2U8 911 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 USP6P35125 1406 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 KLRF2D3W0D1 207 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 K7ENM7 598 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 KRT8P05787 483 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 ANXA13P27216 316 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 PSTPIP2Q9H939 334 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 COPG1Q9Y678 874 aaKnown RBP12.76□□□□□ -0.37
TRAF3-201ENST00000347662 KRT7P08729 469 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 ZSCAN20P17040 1043 aaPredicted RBP12.75□□□□□ -0.37
TRAF3-201ENST00000347662 GRIN1Q05586 938 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 DMP1Q13316 513 aaPredicted RBP12.75□□□□□ -0.37
TRAF3-201ENST00000347662 XKR9Q5GH70 373 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 NLRP10Q86W26 655 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 KCTD17Q8N5Z5 321 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 NAF1Q96HR8 494 aaKnown RBP12.75□□□□□ -0.37
TRAF3-201ENST00000347662 NUDCD1Q96RS6 583 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 STX18Q9P2W9 335 aaKnown RBP12.75□□□□□ -0.37
TRAF3-201ENST00000347662 PSMD2Q13200 908 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 LRCH2Q5VUJ6 765 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 AP1ARQ63HQ0 302 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 ERVK-7P63135 1459 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 A0A0D9SFI3 127 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 STAT1P42224 750 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 CENPAP49450 140 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 RBM6P78332 1123 aaKnown RBP12.75□□□□□ -0.37
TRAF3-201ENST00000347662 POLA2Q14181 598 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 IMPG1Q17R60 797 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 C16orf87Q6PH81 154 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 HOMER3Q9NSC5 361 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 TLK1Q9UKI8 766 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 SPATA31A3Q5VYP0 1347 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 PRPF4O43172 522 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAF3-201ENST00000347662 ADCY1Q08828 1119 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 KLHL40Q2TBA0 621 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 ANO1Q5XXA6 986 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 SLFN13Q68D06 897 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 EEPD1Q7L9B9 569 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 AP5M1Q9H0R1 490 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 PIM2Q9P1W9 311 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 PCDHB4Q9Y5E5 795 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 ADGRL3Q9HAR2 1447 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 BUB1O43683 1085 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 ARMC9Q7Z3E5 817 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 FBXO11Q86XK2 927 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 FAM149B1Q96BN6 582 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 DIAPH2O60879 1101 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 DYNLL1P63167 89 aaKnown RBP12.75□□□□□ -0.37
TRAF3-201ENST00000347662 UBXN2AP68543 259 aa12.75□□□□□ -0.37
TRAF3-201ENST00000347662 ENOX1Q8TC92 643 aaKnown RBP12.75□□□□□ -0.37
TRAF3-201ENST00000347662 ARIH2O95376 493 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 KRT25Q7Z3Z0 450 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 SPATS2Q86XZ4 545 aaKnown RBP12.74□□□□□ -0.37
TRAF3-201ENST00000347662 PDCD6IPQ8WUM4 868 aaKnown RBP12.74□□□□□ -0.37
TRAF3-201ENST00000347662 MIS12Q9H081 205 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 HSPD1P10809 573 aaKnown RBP12.74□□□□□ -0.37
TRAF3-201ENST00000347662 SLC9A1P19634 815 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 C8orf34Q49A92 452 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 GRAMD4Q6IC98 578 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 KCTD1Q719H9 257 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 GPKOWQ92917 476 aaPredicted RBP eCLIP12.74□□□□□ -0.37
TRAF3-201ENST00000347662 TRIM45Q9H8W5 580 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-201ENST00000347662 STRIP2Q9ULQ0 834 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 CHEK2O96017 543 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 MXD4Q14582 209 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-201ENST00000347662 SLMAPQ14BN4 828 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 AARS2Q5JTZ9 985 aaKnown RBP12.74□□□□□ -0.37
TRAF3-201ENST00000347662 LZTS2Q9BRK4 669 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 LUC7L3O95232 432 aaKnown RBP12.74□□□□□ -0.37
TRAF3-201ENST00000347662 MRPL28Q13084 256 aaKnown RBP12.74□□□□□ -0.37
TRAF3-201ENST00000347662 ELMOD1Q8N336 334 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 DEPDC1BQ8WUY9 529 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 SLF1Q9BQI6 1058 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 RAD18Q9NS91 495 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 MYOM2P54296 1465 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 KCNQ2O43526 872 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 FGAP02671 866 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 DRP2Q13474 957 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 TRIM42Q8IWZ5 723 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 C7orf31Q8N865 590 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 TSKSQ9UJT2 592 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 FAM135BQ49AJ0 1406 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 VGLL3A8MV65 326 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 TBC1D10BQ4KMP7 808 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-201ENST00000347662 CIAPIN1Q6FI81 312 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 NDUFAF2Q8N183 169 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 ZSCAN10Q96SZ4 725 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-201ENST00000347662 BLZF1Q9H2G9 400 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 RGL1Q9NZL6 768 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 ZNF212Q9UDV6 495 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 KCNH3Q9ULD8 1083 aa12.74□□□□□ -0.37
TRAF3-201ENST00000347662 MCF2P10911 925 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 PSMC1P62191 440 aaKnown RBP12.73□□□□□ -0.37
TRAF3-201ENST00000347662 CABP7Q86V35 215 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms