RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 VSIG10LQ86VR7 867 aa24■■□□□ 1.43
TSPAN3-202ENST00000346495 POTEFA5A3E0 1075 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 E9PMD0 336 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 CELF2O95319 508 aaKnown RBP23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 NR3C2P08235 984 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 PLA2G4BP0C869 781 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 MUTP22033 750 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 PDE4DQ08499 809 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 HS1BP3Q53T59 392 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 KLHL10Q6JEL2 608 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 POTEGQ6S5H5 508 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 B3GNT9Q6UX72 402 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 UNC13DQ70J99 1090 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 GIMAP8Q8ND71 665 aaPredicted RBP23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 PAGR1Q9BTK6 254 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 UNC45AQ9H3U1 944 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 BMP2KQ9NSY1 1161 aaPredicted RBP23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 PNMA3Q9UL41 463 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 DNM3Q9UQ16 869 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 SYNRGQ9UMZ2 1314 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 CNMDO75829 334 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 SLC25A27O95847 323 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 PTMAP06454 111 aaKnown RBP23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 CETPP11597 493 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 CDC25BP30305 580 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 ANKRD35Q8N283 1001 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 MRFAP1L1Q96HT8 127 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 HSD3B7Q9H2F3 369 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 NMRK2Q9NPI5 230 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 FANCLQ9NW38 375 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 GDAQ9Y2T3 454 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 NFE2L3Q9Y4A8 694 aa23.99■■□□□ 1.43
TSPAN3-202ENST00000346495 LCTP09848 1927 aa23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 CHMP2AO43633 222 aa23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 STAM2O75886 525 aa23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 PPP1R2P41236 205 aa23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 GTF2A2P52657 109 aa23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 STIM1Q13586 685 aa23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 EPHA7Q15375 998 aa23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 SPATA1Q5VX52 437 aa23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 NLRX1Q86UT6 975 aa23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 NCAPG2Q86XI2 1143 aa23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 TRMT44Q8IYL2 757 aaKnown RBP23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 DNERQ8NFT8 737 aa23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 NEK9Q8TD19 979 aa23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 GTF3C2Q8WUA4 911 aaPredicted RBP23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 DDX12PQ92771 950 aa23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 HSD17B14Q9BPX1 270 aa23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 TBC1D22BQ9NU19 505 aa23.98■■□□□ 1.43
TSPAN3-202ENST00000346495 SSBP05455 408 aaKnown RBP eCLIP23.97■■□□□ 1.43
TSPAN3-202ENST00000346495 DYMQ7RTS9 669 aa23.97■■□□□ 1.43
TSPAN3-202ENST00000346495 GPRASP2Q96D09 838 aa23.97■■□□□ 1.43
TSPAN3-202ENST00000346495 MED15Q96RN5 788 aa23.97■■□□□ 1.43
TSPAN3-202ENST00000346495 IWS1Q96ST2 819 aa23.97■■□□□ 1.43
TSPAN3-202ENST00000346495 MOV10L1Q9BXT6 1211 aaKnown RBP23.97■■□□□ 1.43
TSPAN3-202ENST00000346495 RWDD2AQ9UIY3 292 aa23.97■■□□□ 1.43
TSPAN3-202ENST00000346495 CTNND2Q9UQB3 1225 aa23.97■■□□□ 1.43
TSPAN3-202ENST00000346495 SLC45A1Q9Y2W3 748 aa23.97■■□□□ 1.43
TSPAN3-202ENST00000346495 TESPA1A2RU30 521 aaPredicted RBP23.96■■□□□ 1.43
TSPAN3-202ENST00000346495 MAFGO15525 162 aa23.96■■□□□ 1.43
TSPAN3-202ENST00000346495 PRCPP42785 496 aa23.96■■□□□ 1.43
TSPAN3-202ENST00000346495 CYP4A11Q02928 519 aa23.96■■□□□ 1.43
TSPAN3-202ENST00000346495 PAK1Q13153 545 aa23.96■■□□□ 1.43
TSPAN3-202ENST00000346495 ADSSL1Q8N142 457 aa23.96■■□□□ 1.43
TSPAN3-202ENST00000346495 DYDC2Q96IM9 177 aa23.96■■□□□ 1.43
TSPAN3-202ENST00000346495 RBPJLQ9UBG7 517 aa23.96■■□□□ 1.43
TSPAN3-202ENST00000346495 GOLGA6L6A8MZA4 724 aa23.95■■□□□ 1.43
TSPAN3-202ENST00000346495 DHX15O43143 795 aaKnown RBP23.95■■□□□ 1.43
TSPAN3-202ENST00000346495 PEX10O60683 326 aa23.95■■□□□ 1.43
TSPAN3-202ENST00000346495 SLC12A3P55017 1021 aa23.95■■□□□ 1.43
TSPAN3-202ENST00000346495 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.95■■□□□ 1.43
TSPAN3-202ENST00000346495 GPBP1Q86WP2 473 aa23.95■■□□□ 1.43
TSPAN3-202ENST00000346495 SYT2Q8N9I0 419 aaPredicted RBP23.95■■□□□ 1.43
TSPAN3-202ENST00000346495 INPP4AQ96PE3 977 aaPredicted RBP23.95■■□□□ 1.43
TSPAN3-202ENST00000346495 RGL1Q9NZL6 768 aa23.95■■□□□ 1.43
TSPAN3-202ENST00000346495 PKD2L1Q9P0L9 805 aa23.95■■□□□ 1.43
TSPAN3-202ENST00000346495 TRPM7Q96QT4 1865 aa23.95■■□□□ 1.42
TSPAN3-202ENST00000346495 SLITRK3O94933 977 aa23.95■■□□□ 1.42
TSPAN3-202ENST00000346495 EYA4O95677 639 aa23.95■■□□□ 1.42
TSPAN3-202ENST00000346495 FANCCQ00597 558 aa23.95■■□□□ 1.42
TSPAN3-202ENST00000346495 PSMD2Q13200 908 aa23.95■■□□□ 1.42
TSPAN3-202ENST00000346495 ITGB3BPQ13352 177 aaPredicted RBP23.95■■□□□ 1.42
TSPAN3-202ENST00000346495 COBLL1Q53SF7 1204 aa23.95■■□□□ 1.42
TSPAN3-202ENST00000346495 NELFBQ8WX92 580 aa23.95■■□□□ 1.42
TSPAN3-202ENST00000346495 DNAJC19Q96DA6 116 aa23.95■■□□□ 1.42
TSPAN3-202ENST00000346495 MS4A4AQ96JQ5 239 aa23.95■■□□□ 1.42
TSPAN3-202ENST00000346495 DDX39AO00148 427 aaKnown RBP23.94■■□□□ 1.42
TSPAN3-202ENST00000346495 ZNF18P17022 549 aa23.94■■□□□ 1.42
TSPAN3-202ENST00000346495 CYP11B2P19099 503 aa23.94■■□□□ 1.42
TSPAN3-202ENST00000346495 ERCC3P19447 782 aa23.94■■□□□ 1.42
TSPAN3-202ENST00000346495 STX17P56962 302 aa23.94■■□□□ 1.42
TSPAN3-202ENST00000346495 PSMC6P62333 389 aa23.94■■□□□ 1.42
TSPAN3-202ENST00000346495 CTTNQ14247 550 aaKnown RBP23.94■■□□□ 1.42
TSPAN3-202ENST00000346495 CHADLQ6NUI6 762 aa23.94■■□□□ 1.42
TSPAN3-202ENST00000346495 MIER3Q7Z3K6 550 aa23.94■■□□□ 1.42
TSPAN3-202ENST00000346495 TPH2Q8IWU9 490 aa23.94■■□□□ 1.42
TSPAN3-202ENST00000346495 DRC7Q8IY82 874 aa23.94■■□□□ 1.42
TSPAN3-202ENST00000346495 CDHR1Q96JP9 859 aa23.94■■□□□ 1.42
TSPAN3-202ENST00000346495 TXNRD2Q9NNW7 524 aa23.94■■□□□ 1.42
TSPAN3-202ENST00000346495 TCEAL9Q9UHQ7 104 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms