RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 TCP11X2Q5H9J9 407 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 VPS39Q96JC1 886 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 ARMT1Q9H993 441 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 MYOM2P54296 1465 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 SAT1P21673 171 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 ATP6V0A4Q9HBG4 840 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 STX18Q9P2W9 335 aaKnown RBP20.85■□□□□ 0.93
HDAC4-201ENST00000345617 FBXO38Q6PIJ6 1188 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 NT5C1BQ96P26 610 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 ITGB1BP2Q9UKP3 347 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 GOLGA8MH3BSY2 632 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 NCF2P19878 526 aaPredicted RBP20.85■□□□□ 0.93
HDAC4-201ENST00000345617 PSMC2P35998 433 aaKnown RBP20.85■□□□□ 0.93
HDAC4-201ENST00000345617 ZNF658Q5TYW1 1059 aaPredicted RBP20.85■□□□□ 0.93
HDAC4-201ENST00000345617 ARHGEF25Q86VW2 580 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 ATP6V1E2Q96A05 226 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 EPM2AIP1Q7L775 607 aaPredicted RBP20.85■□□□□ 0.93
HDAC4-201ENST00000345617 TMCC1O94876 653 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 SLC39A14Q15043 492 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 SPDYE16A6NNV3 312 aaPredicted RBP20.84■□□□□ 0.93
HDAC4-201ENST00000345617 JAK2O60674 1132 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 TMEM191BP0C7N4 346 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 CA4P22748 312 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 SPDYE2Q495Y8 402 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 NHEJ1Q9H9Q4 299 aaPredicted RBP20.84■□□□□ 0.93
HDAC4-201ENST00000345617 DNAJC17Q9NVM6 304 aaKnown RBP20.84■□□□□ 0.93
HDAC4-201ENST00000345617 ATP8B3O60423 1300 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 LARP4BQ92615 738 aaKnown RBP20.84■□□□□ 0.93
HDAC4-201ENST00000345617 USP40Q9NVE5 1235 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 MTMR6Q9Y217 621 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 KRT16P08779 473 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 NR2F2P24468 414 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 TRIM45Q9H8W5 580 aaPredicted RBP20.84■□□□□ 0.93
HDAC4-201ENST00000345617 L3MBTL1Q9Y468 752 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 GCFC2P16383 781 aaKnown RBP20.84■□□□□ 0.93
HDAC4-201ENST00000345617 MRPS15P82914 257 aaKnown RBP20.84■□□□□ 0.93
HDAC4-201ENST00000345617 ITKQ08881 620 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 NDUFA10O95299 355 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 MED10Q9BTT4 135 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 HIBADHP31937 336 aaKnown RBP20.84■□□□□ 0.93
HDAC4-201ENST00000345617 KCTD6Q8NC69 237 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 SENP1Q9P0U3 644 aa20.84■□□□□ 0.93
HDAC4-201ENST00000345617 PDE8AO60658 829 aa20.83■□□□□ 0.93
HDAC4-201ENST00000345617 HOMEZQ8IX15 550 aa20.83■□□□□ 0.93
HDAC4-201ENST00000345617 NFATC2IPQ8NCF5 419 aa20.83■□□□□ 0.93
HDAC4-201ENST00000345617 NGLY1Q96IV0 654 aa20.83■□□□□ 0.93
HDAC4-201ENST00000345617 CNGA3Q16281 694 aa20.83■□□□□ 0.93
HDAC4-201ENST00000345617 FAM102BQ5T8I3 360 aa20.83■□□□□ 0.93
HDAC4-201ENST00000345617 MIF4GDA9UHW6 222 aaKnown RBP20.83■□□□□ 0.93
HDAC4-201ENST00000345617 XPOTO43592 962 aaKnown RBP20.83■□□□□ 0.93
HDAC4-201ENST00000345617 TMOD1P28289 359 aa20.83■□□□□ 0.93
HDAC4-201ENST00000345617 TRPC1P48995 793 aa20.83■□□□□ 0.93
HDAC4-201ENST00000345617 BRIP1Q9BX63 1249 aa20.83■□□□□ 0.93
HDAC4-201ENST00000345617 PPARAQ07869 468 aa20.83■□□□□ 0.93
HDAC4-201ENST00000345617 FAM26FQ5R3K3 315 aa20.83■□□□□ 0.93
HDAC4-201ENST00000345617 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.83■□□□□ 0.938e-7■■■■■ 61.3
HDAC4-201ENST00000345617 BLOC1S6Q9UL45 172 aa20.83■□□□□ 0.93
HDAC4-201ENST00000345617 INTUQ9ULD6 942 aa20.83■□□□□ 0.93
HDAC4-201ENST00000345617 ZBTB12Q9Y330 459 aaPredicted RBP20.83■□□□□ 0.93
HDAC4-201ENST00000345617 ZNF532Q9HCE3 1301 aa20.83■□□□□ 0.92
HDAC4-201ENST00000345617 NUGGCQ68CJ6 796 aa20.83■□□□□ 0.92
HDAC4-201ENST00000345617 PYROXD1Q8WU10 500 aa20.83■□□□□ 0.92
HDAC4-201ENST00000345617 CHURC1Q8WUH1 139 aa20.83■□□□□ 0.92
HDAC4-201ENST00000345617 SMARCA1P28370 1054 aa20.83■□□□□ 0.92
HDAC4-201ENST00000345617 KIAA2013Q8IYS2 634 aa20.83■□□□□ 0.92
HDAC4-201ENST00000345617 CNBD1Q8NA66 436 aa20.83■□□□□ 0.92
HDAC4-201ENST00000345617 GDAP1Q8TB36 358 aa20.83■□□□□ 0.92
HDAC4-201ENST00000345617 NSFL1CQ9UNZ2 370 aaKnown RBP20.83■□□□□ 0.92
HDAC4-201ENST00000345617 KDM5CP41229 1560 aa20.83■□□□□ 0.92
HDAC4-201ENST00000345617 PMLP29590 882 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 KCNJ14Q9UNX9 436 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 KIAA0556O60303 1618 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 SPOPLQ6IQ16 392 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 ZNF653Q96CK0 615 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 AATFQ9NY61 560 aaKnown RBP eCLIP20.82■□□□□ 0.92
HDAC4-201ENST00000345617 C2orf54Q08AI8 447 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 TBCCQ15814 346 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 KLHL38Q2WGJ6 581 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 SCYL2Q6P3W7 929 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 RFX6Q8HWS3 928 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 ASPSCR1Q9BZE9 553 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 PLEKHA4Q9H4M7 779 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 MYCLP12524 364 aaPredicted RBP20.82■□□□□ 0.92
HDAC4-201ENST00000345617 NAF1Q96HR8 494 aaKnown RBP20.82■□□□□ 0.92
HDAC4-201ENST00000345617 A2MP01023 1474 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 DNAAF3Q8N9W5 541 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 JARID2Q92833 1246 aaPredicted RBP20.82■□□□□ 0.92
HDAC4-201ENST00000345617 OPTNQ96CV9 577 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 TMEM206Q9H813 350 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 GMNCA6NCL1 334 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 RBL2Q08999 1139 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 THOC5Q13769 683 aaKnown RBP20.82■□□□□ 0.92
HDAC4-201ENST00000345617 CYP4F22Q6NT55 531 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 OTUB1Q96FW1 271 aaPredicted RBP20.82■□□□□ 0.92
HDAC4-201ENST00000345617 KLC2Q9H0B6 622 aa20.82■□□□□ 0.92
HDAC4-201ENST00000345617 PTGDRQ13258 359 aa20.81■□□□□ 0.92
HDAC4-201ENST00000345617 TNRQ92752 1358 aa20.81■□□□□ 0.92
HDAC4-201ENST00000345617 KPNA7A9QM74 516 aa20.81■□□□□ 0.92
HDAC4-201ENST00000345617 CAPN12Q6ZSI9 719 aa20.81■□□□□ 0.92
HDAC4-201ENST00000345617 VIRMAQ69YN4 1812 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms