RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 PRR29P0C7W0 189 aa13.08□□□□□ -0.32
COL12A1-202ENST00000345356 PDE1BQ01064 536 aa13.08□□□□□ -0.32
COL12A1-202ENST00000345356 GFPT1Q06210 699 aaPredicted RBP13.08□□□□□ -0.32
COL12A1-202ENST00000345356 TTBK2Q6IQ55 1244 aa13.08□□□□□ -0.32
COL12A1-202ENST00000345356 HOOK2Q96ED9 719 aa13.08□□□□□ -0.32
COL12A1-202ENST00000345356 HADHQ16836 314 aaKnown RBP13.08□□□□□ -0.32
COL12A1-202ENST00000345356 KIRREL3Q8IZU9 778 aa13.08□□□□□ -0.32
COL12A1-202ENST00000345356 TRIM49BA6NDI0 452 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 FAM107AO95990 144 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 KRT14P02533 472 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 MAPK4P31152 587 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 CTCFP49711 727 aaPredicted RBP13.07□□□□□ -0.32
COL12A1-202ENST00000345356 OLFML2BQ68BL8 750 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 SPATA21Q7Z572 469 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 NOA1Q8NC60 698 aaKnown RBP13.07□□□□□ -0.32
COL12A1-202ENST00000345356 PRMT1Q99873 361 aaKnown RBP13.07□□□□□ -0.32
COL12A1-202ENST00000345356 EXOC5O00471 708 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 MCF2P10911 925 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 DDIT3P35638 169 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 NSFP46459 744 aaKnown RBP13.07□□□□□ -0.32
COL12A1-202ENST00000345356 MYL7Q01449 175 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 GALNT17Q6IS24 598 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 AFG3L2Q9Y4W6 797 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 DDAH1O94760 285 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 TNNI1P19237 187 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 KIF22Q14807 665 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 RFX8Q6ZV50 586 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 HAUS8Q9BT25 410 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 ZC4H2Q9NQZ6 224 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 FANCAO15360 1455 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 H3BQF6 201 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 LRRN2O75325 713 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 HMGB2P26583 209 aaKnown RBP13.07□□□□□ -0.32
COL12A1-202ENST00000345356 CUL4BQ13620 913 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 PTGISQ16647 500 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 IWS1Q96ST2 819 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 GPHNQ9NQX3 736 aaPredicted RBP13.07□□□□□ -0.32
COL12A1-202ENST00000345356 DLGAP2Q9P1A6 1054 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 ARL2BPQ9Y2Y0 163 aa13.07□□□□□ -0.32
COL12A1-202ENST00000345356 LRRC53A6NM62 1247 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 USP17L12C9JPN9 530 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 USP17L21D6R901 530 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 LAD1O00515 517 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 ZFXP17010 805 aaPredicted RBP13.06□□□□□ -0.32
COL12A1-202ENST00000345356 PTPREP23469 700 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 MDM2Q00987 491 aaPredicted RBP13.06□□□□□ -0.32
COL12A1-202ENST00000345356 RASGRP4Q8TDF6 673 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 DNAJC9Q8WXX5 260 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 CDKL2Q92772 493 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 SIRT1Q96EB6 747 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 PALMDQ9NP74 551 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 ARPP21Q9UBL0 812 aaPredicted RBP13.06□□□□□ -0.32
COL12A1-202ENST00000345356 TRAF3IP3Q9Y228 551 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 SH2B2O14492 632 aaPredicted RBP13.06□□□□□ -0.32
COL12A1-202ENST00000345356 SERPINB4P48594 390 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 KRT81Q14533 505 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 TEKT4Q8WW24 435 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 TTC17Q96AE7 1141 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 AK8Q96MA6 479 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 PNKPQ96T60 521 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 RHBDL2Q9NX52 303 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 SNX12Q9UMY4 172 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 TCP11X1B4DZS4 312 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 SAT1P21673 171 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 OCA2Q04671 838 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 GRIN2AQ12879 1464 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 ART3Q13508 389 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 SDR42E1Q8WUS8 393 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 RNPC3Q96LT9 517 aaKnown RBP13.06□□□□□ -0.32
COL12A1-202ENST00000345356 YTHDC2Q9H6S0 1430 aaKnown RBP13.06□□□□□ -0.32
COL12A1-202ENST00000345356 SH3TC1Q8TE82 1336 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 STAM2O75886 525 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 IFNAR1P17181 557 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 GARSP41250 739 aaKnown RBP13.06□□□□□ -0.32
COL12A1-202ENST00000345356 ATG16L1Q676U5 607 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 KIF2BQ8N4N8 673 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 DTX3LQ8TDB6 740 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 IP6K1Q92551 441 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 USP6NLQ92738 828 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 COPRSQ9NQ92 184 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 GOLGA8QA0A0J9YX86 632 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 GOLGA8OA6NCC3 632 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 GOLGA8NF8WBI6 632 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 NVLO15381 856 aaKnown RBP13.06□□□□□ -0.32
COL12A1-202ENST00000345356 MAN1A2O60476 641 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 SNUPNO95149 360 aaKnown RBP13.06□□□□□ -0.32
COL12A1-202ENST00000345356 ANO5Q75V66 913 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 RASGRP2Q7LDG7 609 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 TRPM8Q7Z2W7 1104 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 ICA1LQ8NDH6 482 aa13.06□□□□□ -0.32
COL12A1-202ENST00000345356 CFAP69A5D8W1 941 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 CHN1P15882 459 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 TMOD1P28289 359 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 GFM2Q969S9 779 aaKnown RBP13.05□□□□□ -0.32
COL12A1-202ENST00000345356 C1orf112Q9NSG2 853 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 GCNT4Q9P109 453 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
COL12A1-202ENST00000345356 CD109Q6YHK3 1445 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 CCT8L1PA6NM43 557 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 KCNQ3O43525 872 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms