RNA–Protein interactions for RNA: ENST00000344937.11

CLCN2-202, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLCN2, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-202ENST00000344937 CD248Q9HCU0 757 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 RBM12Q9NTZ6 932 aaKnown RBP17.3■□□□□ 0.36
CLCN2-202ENST00000344937 USP40Q9NVE5 1235 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 MYO1FO00160 1098 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 CYTH3O43739 400 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 ECE2O60344 883 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 ELF1P32519 619 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 BAG6P46379 1132 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 CCDC47Q96A33 483 aaKnown RBP17.3■□□□□ 0.36
CLCN2-202ENST00000344937 OSBPL9Q96SU4 736 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 TRIM9Q9C026 710 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 GOLPH3Q9H4A6 298 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 FAM184BQ9ULE4 1060 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 NFU1Q9UMS0 254 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 SCN9AQ15858 1988 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 PLCG2P16885 1265 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 TRAPPC10P48553 1259 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 SLC35G1Q2M3R5 365 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 USP17L2Q6R6M4 530 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 TMEM260Q9NX78 707 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 CAPN7Q9Y6W3 813 aa17.3■□□□□ 0.36
CLCN2-202ENST00000344937 A0A1W2PQC6 194 aa17.29■□□□□ 0.36
CLCN2-202ENST00000344937 CCNE1P24864 410 aa17.29■□□□□ 0.36
CLCN2-202ENST00000344937 SETQ01105 290 aaPredicted RBP17.29■□□□□ 0.36
CLCN2-202ENST00000344937 CACNB1Q02641 598 aaPredicted RBP17.29■□□□□ 0.36
CLCN2-202ENST00000344937 C8orf74Q6P047 294 aa17.29■□□□□ 0.36
CLCN2-202ENST00000344937 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
CLCN2-202ENST00000344937 CABS1Q96KC9 395 aa17.29■□□□□ 0.36
CLCN2-202ENST00000344937 ZHX3Q9H4I2 956 aa17.29■□□□□ 0.36
CLCN2-202ENST00000344937 MYH1P12882 1939 aa17.29■□□□□ 0.36
CLCN2-202ENST00000344937 SLC1A4P43007 532 aa17.29■□□□□ 0.36
CLCN2-202ENST00000344937 NFIAQ12857 509 aa17.29■□□□□ 0.36
CLCN2-202ENST00000344937 NEDD9Q14511 834 aa17.29■□□□□ 0.36
CLCN2-202ENST00000344937 MIIPQ5JXC2 388 aa17.29■□□□□ 0.36
CLCN2-202ENST00000344937 ARL6IP4Q66PJ3 421 aaKnown RBP17.29■□□□□ 0.36
CLCN2-202ENST00000344937 C7orf43Q8WVR3 580 aa17.29■□□□□ 0.36
CLCN2-202ENST00000344937 CNKSR1Q969H4 720 aa17.29■□□□□ 0.36
CLCN2-202ENST00000344937 PYM1Q9BRP8 204 aaKnown RBP17.29■□□□□ 0.36
CLCN2-202ENST00000344937 SEMA6BQ9H3T3 888 aa17.29■□□□□ 0.36
CLCN2-202ENST00000344937 NDUFAB1O14561 156 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 RHOBTB3O94955 611 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 HPDP32754 393 aaPredicted RBP17.28■□□□□ 0.36
CLCN2-202ENST00000344937 PAFAH1B1P43034 410 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 RBM5P52756 815 aaKnown RBP eCLIP17.28■□□□□ 0.36
CLCN2-202ENST00000344937 EIF6P56537 245 aaKnown RBP17.28■□□□□ 0.36
CLCN2-202ENST00000344937 GUCY2DQ02846 1103 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 CLEC10AQ8IUN9 316 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 VIPAS39Q9H9C1 493 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 MCM8Q9UJA3 840 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 RAD21O60216 631 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 FAM153BP0C7A2 387 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 CARSP49589 748 aaKnown RBP17.28■□□□□ 0.36
CLCN2-202ENST00000344937 FAM153CQ494X1 144 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 CDC42EP5Q6NZY7 148 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 ZFPM1Q8IX07 1006 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 KLHL7Q8IXQ5 586 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 KIAA0895Q8NCT3 520 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 ZKSCAN4Q969J2 545 aaPredicted RBP17.28■□□□□ 0.36
CLCN2-202ENST00000344937 CDK5RAP3Q96JB5 506 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 CCDC43Q96MW1 224 aaKnown RBP17.28■□□□□ 0.36
CLCN2-202ENST00000344937 KBTBD4Q9NVX7 518 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 FAM153AQ9UHL3 310 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 SHTN1A0MZ66 631 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 H0YHG0 523 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 PAX7P23759 505 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 GUCY1A3Q02108 690 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 TCP10Q12799 353 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 MEA1Q16626 185 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 IQCEQ6IPM2 695 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 APOBEC3HQ6NTF7 200 aaKnown RBP17.28■□□□□ 0.36
CLCN2-202ENST00000344937 PODNQ7Z5L7 613 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 TRIM58Q8NG06 486 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 N4BP2L2Q92802 583 aaPredicted RBP17.28■□□□□ 0.36
CLCN2-202ENST00000344937 MTMR8Q96EF0 704 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 TTYH3Q9C0H2 523 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 EPB41L5Q9HCM4 733 aa17.28■□□□□ 0.36
CLCN2-202ENST00000344937 POTEMA6NI47 508 aa17.27■□□□□ 0.36
CLCN2-202ENST00000344937 ECM2O94769 699 aaPredicted RBP17.27■□□□□ 0.36
CLCN2-202ENST00000344937 C16orf86Q6ZW13 317 aa17.27■□□□□ 0.36
CLCN2-202ENST00000344937 NELFCDQ8IXH7 590 aa17.27■□□□□ 0.36
CLCN2-202ENST00000344937 NDST4Q9H3R1 872 aa17.27■□□□□ 0.36
CLCN2-202ENST00000344937 SLC24A3Q9HC58 644 aa17.27■□□□□ 0.36
CLCN2-202ENST00000344937 ROBO3Q96MS0 1386 aa17.27■□□□□ 0.36
CLCN2-202ENST00000344937 SMCO2A6NFE2 343 aa17.27■□□□□ 0.35
CLCN2-202ENST00000344937 BACH1O14867 736 aa17.27■□□□□ 0.35
CLCN2-202ENST00000344937 HSF2BPO75031 334 aa17.27■□□□□ 0.35
CLCN2-202ENST00000344937 FBXO41Q8TF61 875 aa17.27■□□□□ 0.35
CLCN2-202ENST00000344937 TEKT1Q969V4 418 aa17.27■□□□□ 0.35
CLCN2-202ENST00000344937 ALS2CR12Q96Q35 445 aa17.27■□□□□ 0.35
CLCN2-202ENST00000344937 TMEM47Q9BQJ4 181 aa17.27■□□□□ 0.35
CLCN2-202ENST00000344937 TACO1Q9BSH4 297 aaKnown RBP17.27■□□□□ 0.35
CLCN2-202ENST00000344937 KLRF2D3W0D1 207 aa17.26■□□□□ 0.35
CLCN2-202ENST00000344937 OR52Z1P0C646 297 aa17.26■□□□□ 0.35
CLCN2-202ENST00000344937 CRKP46108 304 aa17.26■□□□□ 0.35
CLCN2-202ENST00000344937 FNTAP49354 379 aa17.26■□□□□ 0.35
CLCN2-202ENST00000344937 MAP2K1Q02750 393 aaPredicted RBP17.26■□□□□ 0.35
CLCN2-202ENST00000344937 SH2D4AQ9H788 454 aa17.26■□□□□ 0.35
CLCN2-202ENST00000344937 BICDL2A1A5D9 508 aa17.26■□□□□ 0.35
CLCN2-202ENST00000344937 TARSL2A2RTX5 802 aaKnown RBP17.26■□□□□ 0.35
CLCN2-202ENST00000344937 IRF6O14896 467 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms