RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 PDE2AO00408 941 aaPredicted RBP23.71■■□□□ 1.39
CCDC38-201ENST00000344280 CYP3A7P24462 503 aa23.71■■□□□ 1.39
CCDC38-201ENST00000344280 PSMC6P62333 389 aa23.71■■□□□ 1.39
CCDC38-201ENST00000344280 TUBB4BP68371 445 aa23.71■■□□□ 1.39
CCDC38-201ENST00000344280 ARHGAP4P98171 946 aa23.71■■□□□ 1.39
CCDC38-201ENST00000344280 SPIRE1Q08AE8 756 aa23.71■■□□□ 1.39
CCDC38-201ENST00000344280 SECISBP2LQ93073 1101 aaKnown RBP23.71■■□□□ 1.39
CCDC38-201ENST00000344280 MBOAT7Q96N66 472 aa23.71■■□□□ 1.39
CCDC38-201ENST00000344280 GYS2P54840 703 aa23.71■■□□□ 1.39
CCDC38-201ENST00000344280 RRP1BQ14684 758 aaKnown RBP23.71■■□□□ 1.39
CCDC38-201ENST00000344280 HERC4Q5GLZ8 1057 aaPredicted RBP23.71■■□□□ 1.39
CCDC38-201ENST00000344280 ETNPPLQ8TBG4 499 aa23.71■■□□□ 1.39
CCDC38-201ENST00000344280 SCFD1Q8WVM8 642 aa23.71■■□□□ 1.39
CCDC38-201ENST00000344280 IQCDQ96DY2 449 aa23.71■■□□□ 1.39
CCDC38-201ENST00000344280 BMP2KQ9NSY1 1161 aaPredicted RBP23.71■■□□□ 1.39
CCDC38-201ENST00000344280 NDUFB10O96000 172 aa23.7■■□□□ 1.38
CCDC38-201ENST00000344280 CATSPER3Q86XQ3 398 aa23.7■■□□□ 1.38
CCDC38-201ENST00000344280 TRIM34Q9BYJ4 488 aa23.7■■□□□ 1.38
CCDC38-201ENST00000344280 TDRD3Q9H7E2 651 aaKnown RBP23.7■■□□□ 1.38
CCDC38-201ENST00000344280 ERICH4A6NGS2 130 aa23.7■■□□□ 1.38
CCDC38-201ENST00000344280 FAM86B1E9PN63 330 aa23.7■■□□□ 1.38
CCDC38-201ENST00000344280 MEIS1O00470 390 aa23.7■■□□□ 1.38
CCDC38-201ENST00000344280 FAM86B2P0C5J1 330 aa23.7■■□□□ 1.38
CCDC38-201ENST00000344280 SLC12A3P55017 1021 aa23.7■■□□□ 1.38
CCDC38-201ENST00000344280 CCDC40Q4G0X9 1142 aa23.7■■□□□ 1.38
CCDC38-201ENST00000344280 LENG9Q96B70 501 aa23.7■■□□□ 1.38
CCDC38-201ENST00000344280 MRIQ9BWK5 157 aa23.7■■□□□ 1.38
CCDC38-201ENST00000344280 DEF6Q9H4E7 631 aa23.7■■□□□ 1.38
CCDC38-201ENST00000344280 PDE11AQ9HCR9 933 aa23.7■■□□□ 1.38
CCDC38-201ENST00000344280 NLRC4Q9NPP4 1024 aa23.7■■□□□ 1.38
CCDC38-201ENST00000344280 JADE2Q9NQC1 790 aa23.7■■□□□ 1.38
CCDC38-201ENST00000344280 NOL4O94818 638 aa23.69■■□□□ 1.38
CCDC38-201ENST00000344280 ABCB5Q2M3G0 1257 aa23.69■■□□□ 1.38
CCDC38-201ENST00000344280 PDXDC1Q6P996 788 aa23.69■■□□□ 1.38
CCDC38-201ENST00000344280 CCDC65Q8IXS2 484 aa23.69■■□□□ 1.38
CCDC38-201ENST00000344280 DRC1Q96MC2 740 aa23.69■■□□□ 1.38
CCDC38-201ENST00000344280 NAP1L4Q99733 375 aaKnown RBP23.69■■□□□ 1.38
CCDC38-201ENST00000344280 CRACR2AQ9BSW2 395 aa23.69■■□□□ 1.38
CCDC38-201ENST00000344280 GLT8D2Q9H1C3 349 aa23.69■■□□□ 1.38
CCDC38-201ENST00000344280 KCTD10Q9H3F6 313 aa23.69■■□□□ 1.38
CCDC38-201ENST00000344280 ZHX3Q9H4I2 956 aa23.69■■□□□ 1.38
CCDC38-201ENST00000344280 SH2D4AQ9H788 454 aa23.69■■□□□ 1.38
CCDC38-201ENST00000344280 ERLIN1O75477 346 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 MOCS3O95396 460 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 CASP5P51878 434 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 USP14P54578 494 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 GFPT1Q06210 699 aaPredicted RBP23.68■■□□□ 1.38
CCDC38-201ENST00000344280 IKQ13123 557 aaPredicted RBP23.68■■□□□ 1.38
CCDC38-201ENST00000344280 HGSNATQ68CP4 663 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 FOXR2Q6PJQ5 311 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 TMEM179Q6ZVK1 233 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 HDXQ7Z353 690 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 NEK11Q8NG66 645 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 AMNQ9BXJ7 453 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 SALL4Q9UJQ4 1053 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 SMCHD1A6NHR9 2005 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 MYH10P35580 1976 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 OPLAHO14841 1288 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 AKR1B10O60218 316 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 LCA5LO95447 670 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 HOXA13P31271 388 aaPredicted RBP23.68■■□□□ 1.38
CCDC38-201ENST00000344280 AOC3Q16853 763 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 ANKRD13CQ8N6S4 541 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 CYP2W1Q8TAV3 490 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 SLX4Q8IY92 1834 aa23.68■■□□□ 1.38
CCDC38-201ENST00000344280 APBA3O96018 575 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 GH2P01242 217 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 CHRNA5P30532 468 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 CYP2C19P33261 490 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 AP3B2Q13367 1082 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 ASTE1Q2TB18 679 aaPredicted RBP23.67■■□□□ 1.38
CCDC38-201ENST00000344280 WDR93Q6P2C0 686 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 CACNA2D4Q7Z3S7 1137 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 SPICE1Q8N0Z3 855 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 TSGA10Q9BZW7 698 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 EMILIN3Q9NT22 766 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 A0A1W2PRG0 241 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 ANO9A1A5B4 782 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 N4BP1O75113 896 aaKnown RBP23.67■■□□□ 1.38
CCDC38-201ENST00000344280 SPATA31C1P0DKV0 1188 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 FBXO11Q86XK2 927 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 SLFN12Q8IYM2 578 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 BCAS3Q9H6U6 928 aa23.67■■□□□ 1.38
CCDC38-201ENST00000344280 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.67■■□□□ 1.38
CCDC38-201ENST00000344280 FRMD3A2A2Y4 597 aa23.66■■□□□ 1.38
CCDC38-201ENST00000344280 TLR2O60603 784 aa23.66■■□□□ 1.38
CCDC38-201ENST00000344280 ZMYND10O75800 440 aa23.66■■□□□ 1.38
CCDC38-201ENST00000344280 KRT18P05783 430 aaKnown RBP23.66■■□□□ 1.38
CCDC38-201ENST00000344280 PABPC4Q13310 644 aaKnown RBP eCLIP23.66■■□□□ 1.38
CCDC38-201ENST00000344280 CASP8Q14790 479 aa23.66■■□□□ 1.38
CCDC38-201ENST00000344280 POLD4Q9HCU8 107 aa23.66■■□□□ 1.38
CCDC38-201ENST00000344280 SERPINA10Q9UK55 444 aa23.66■■□□□ 1.38
CCDC38-201ENST00000344280 ZNF646O15015 1829 aaPredicted RBP23.66■■□□□ 1.38
CCDC38-201ENST00000344280 HDLBPQ00341 1268 aaKnown RBP23.66■■□□□ 1.38
CCDC38-201ENST00000344280 SYDE2Q5VT97 1194 aa23.66■■□□□ 1.38
CCDC38-201ENST00000344280 TRIM59Q8IWR1 403 aa23.66■■□□□ 1.38
CCDC38-201ENST00000344280 GMCL1P1Q8NEA9 526 aa23.66■■□□□ 1.38
CCDC38-201ENST00000344280 USO1O60763 962 aaKnown RBP23.65■■□□□ 1.38
CCDC38-201ENST00000344280 HOXA7P31268 230 aaPredicted RBP23.65■■□□□ 1.38
CCDC38-201ENST00000344280 FAM83BQ5T0W9 1011 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms