RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 RPS2P15880 293 aaKnown RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 CTNNA1P35221 906 aaKnown RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ATP13A5Q4VNC0 1218 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 SMYD5Q6GMV2 418 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 PACS2Q86VP3 889 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 LURAP1LQ8IV03 231 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 DCLRE1BQ9H816 532 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 USP19O94966 1318 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 SYNJ2BP-COX16A0A087WUM0 186 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 CSE1LP55060 971 aaKnown RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ATF7IPQ6VMQ6 1270 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 PDRG1Q9NUG6 133 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 PORP16435 677 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 CTNNA2P26232 953 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 IL9RQ01113 521 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 TBC1D25Q3MII6 688 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ZMYM1Q5SVZ6 1142 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 SNX30Q5VWJ9 437 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 GET4Q7L5D6 327 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 BEST2Q8NFU1 509 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 NEK11Q8NG66 645 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 GDAP1Q8TB36 358 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 HAUS4Q9H6D7 363 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 GPC6Q9Y625 555 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 AP2B1P63010 937 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ANO1Q5XXA6 986 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 SYCP3Q8IZU3 236 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 MGARPQ8TDB4 240 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 NEUROD6Q96NK8 337 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ZCCHC17Q9NP64 241 aaKnown RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 STRN4Q9NRL3 753 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 PLIN5Q00G26 463 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ZC2HC1CQ53FD0 456 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 CDC5LQ99459 802 aaKnown RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 EHD2Q9NZN4 543 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 TNFRSF8P28908 595 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 TBC1D8BQ0IIM8 1120 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 TXNDC16Q9P2K2 825 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 RPS6KL1Q9Y6S9 549 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 PIK3C2GO75747 1445 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 RGS16O15492 202 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 SMARCA5O60264 1052 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 MICALL2Q8IY33 904 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 BRSK1Q8TDC3 778 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 KLHL29Q96CT2 875 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 TRIM56Q9BRZ2 755 aaKnown RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 SERPINB13Q9UIV8 391 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 PIK3CAP42336 1068 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 RBM5P52756 815 aaKnown RBP eCLIP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 PLA2G4DQ86XP0 818 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF354CQ86Y25 554 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ENKURQ8TC29 256 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 MYD88Q99836 296 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 MRPL39Q9NYK5 338 aaKnown RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 FBXO9Q9UK97 447 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 TMEM98Q9Y2Y6 226 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF701M0R085 212 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 NTRK1P04629 796 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 TYRO3Q06418 890 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 LACTB2Q53H82 288 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 BRF1Q92994 677 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 CCDC42Q96M95 316 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 SLF1Q9BQI6 1058 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 EDEM3Q9BZQ6 932 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 PSMA7O14818 248 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TSPAN1O60635 241 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 PCNAP12004 261 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 KRT13P13646 458 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 HOXB1P14653 301 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 RAB27AP51159 221 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TRIM16LQ309B1 348 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 BRIP1Q9BX63 1249 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF24P17028 368 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 CUL1Q13616 776 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF394Q53GI3 561 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 RSRC2Q7L4I2 434 aaKnown RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 BNIPLQ7Z465 357 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TMEM126BQ8IUX1 230 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 FUKQ8N0W3 1084 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 CEP70Q8NHQ1 597 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 PPP1R37O75864 691 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TMC5Q6UXY8 1006 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TXNDC2Q86VQ3 553 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TRIM45Q9H8W5 580 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 MCM9Q9NXL9 1143 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 O00370 1275 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 OCRLQ01968 901 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TMEM60Q9H2L4 133 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 STAMQ92783 540 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 EPAS1Q99814 870 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TRMT6Q9UJA5 497 aaKnown RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 USP47Q96K76 1375 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 ANGPT2O15123 496 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 GNGT1P63211 74 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 PLA2G4EQ3MJ16 856 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 SLF2Q8IX21 1173 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 RMDN1Q96DB5 314 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 FUT8Q9BYC5 575 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms