RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 ADD3Q9UEY8 706 aaKnown RBP11.87□□□□□ -0.51
RPL28-201ENST00000344063 GAS8O95995 478 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 KRT14P02533 472 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 ATP2A2P16615 1042 aaKnown RBP11.87□□□□□ -0.51
RPL28-201ENST00000344063 KCNB1Q14721 858 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 SLFN13Q68D06 897 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 NLRP14Q86W24 1093 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 VPS52Q8N1B4 723 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 MSANTD4Q8NCY6 345 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 ANKRD26Q9UPS8 1709 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 PVALEFA0A1B0GWK0 134 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 AFPP02771 609 aaKnown RBP11.87□□□□□ -0.51
RPL28-201ENST00000344063 KRT15P19012 456 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 CYP2J2P51589 502 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 WDR78Q5VTH9 848 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 KCNV2Q8TDN2 545 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 ACTR5Q9H9F9 607 aaPredicted RBP11.87□□□□□ -0.51
RPL28-201ENST00000344063 PACSIN2Q9UNF0 486 aaPredicted RBP11.87□□□□□ -0.51
RPL28-201ENST00000344063 PGRMC1O00264 195 aaKnown RBP11.87□□□□□ -0.51
RPL28-201ENST00000344063 LMNB1P20700 586 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 GLE1Q53GS7 698 aaKnown RBP11.87□□□□□ -0.51
RPL28-201ENST00000344063 KIRREL3Q8IZU9 778 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 RDH13Q8NBN7 331 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 WHAMMQ8TF30 809 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 PBKQ96KB5 322 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 PHF20Q9BVI0 1012 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 AMNQ9BXJ7 453 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 VCXQ9H320 206 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 HOMER3Q9NSC5 361 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 MINPP1Q9UNW1 487 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 TXNDC9O14530 226 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 TAF11Q15544 211 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 RASGRP2Q7LDG7 609 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 CHURC1Q8WUH1 139 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 MPHOSPH6Q99547 160 aaKnown RBP11.86□□□□□ -0.51
RPL28-201ENST00000344063 FAM114A2Q9NRY5 505 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 LARSQ9P2J5 1176 aaKnown RBP11.86□□□□□ -0.51
RPL28-201ENST00000344063 MEFVO15553 781 aaPredicted RBP11.86□□□□□ -0.51
RPL28-201ENST00000344063 PTPAQ15257 358 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 OTUD6AQ7L8S5 288 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 FBXL16Q8N461 479 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 SERPINB13Q9UIV8 391 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 PTPN22Q9Y2R2 807 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 RABGAP1Q9Y3P9 1069 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 LRRD1A4D1F6 860 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 EIF3HO15372 352 aaKnown RBP eCLIP11.86□□□□□ -0.51
RPL28-201ENST00000344063 MYCNP04198 464 aaPredicted RBP11.86□□□□□ -0.51
RPL28-201ENST00000344063 CYP2D6P10635 497 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 PRDX5P30044 214 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 CDK8P49336 464 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 DIXDC1Q155Q3 683 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 CERKLQ49MI3 558 aaPredicted RBP11.86□□□□□ -0.51
RPL28-201ENST00000344063 PPP4R3CPQ6ZMV5 832 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 PROM2Q8N271 834 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 PROCA1Q8NCQ7 364 aaPredicted RBP11.86□□□□□ -0.51
RPL28-201ENST00000344063 GJA10Q969M2 543 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 COA7Q96BR5 231 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 SPDL1Q96EA4 605 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 EMILIN3Q9NT22 766 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 HAUS2Q9NVX0 235 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 L1RE1Q9UN81 338 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 HPSEQ9Y251 543 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 GAP43P17677 238 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 DPYDQ12882 1025 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 GRM4Q14833 912 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 MAEAQ7L5Y9 396 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 VTI1AQ96AJ9 217 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 GBP5Q96PP8 586 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 ADAMTS1Q9UHI8 967 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 GGT7Q9UJ14 662 aa11.86□□□□□ -0.51
RPL28-201ENST00000344063 POLE2P56282 527 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 ICA1Q05084 483 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 PABPC4Q13310 644 aaKnown RBP eCLIP11.85□□□□□ -0.516e-10■■■■■ 42.7
RPL28-201ENST00000344063 HHATQ5VTY9 493 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 FAM133AQ8N9E0 248 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 TMEM47Q9BQJ4 181 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 CAPN11Q9UMQ6 739 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 ALDH1B1P30837 517 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 GRIN1Q05586 938 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 TRIM65Q6PJ69 517 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 PARP9Q8IXQ6 854 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 MLXIPLQ9NP71 852 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 HMGB1P1B2RPK0 211 aaPredicted RBP11.85□□□□□ -0.51
RPL28-201ENST00000344063 POLD1P28340 1107 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 ELF1P32519 619 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 MAGOHP61326 146 aaKnown RBP11.85□□□□□ -0.51
RPL28-201ENST00000344063 CACNB1Q02641 598 aaPredicted RBP11.85□□□□□ -0.51
RPL28-201ENST00000344063 SPATA4Q8NEY3 305 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 MAGOHBQ96A72 148 aaKnown RBP11.85□□□□□ -0.51
RPL28-201ENST00000344063 HVCN1Q96D96 273 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 CCSER1Q9C0I3 900 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 IFT172Q9UG01 1749 aa11.85□□□□□ -0.51
RPL28-201ENST00000344063 H0Y3Z8 333 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 CYP4A11Q02928 519 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 RASIP1Q5U651 963 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 OSBPL9Q96SU4 736 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 EPB41L4AQ9HCS5 686 aaPredicted RBP11.84□□□□□ -0.51
RPL28-201ENST00000344063 DDX39AO00148 427 aaKnown RBP11.84□□□□□ -0.51
RPL28-201ENST00000344063 SUN1O94901 812 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 PLA2G4BP0C869 781 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms