RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 ASTE1Q2TB18 679 aaPredicted RBP16.3■□□□□ 0.2
CLCN1-201ENST00000343257 FAM83BQ5T0W9 1011 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.3■□□□□ 0.2
CLCN1-201ENST00000343257 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.3■□□□□ 0.2
CLCN1-201ENST00000343257 LRP6O75581 1613 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 TSPY2A6NKD2 308 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 KRIT1O00522 736 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 TXKP42681 527 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 GYG1P46976 350 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 SARNPP82979 210 aaKnown RBP16.3■□□□□ 0.2
CLCN1-201ENST00000343257 PRPF4BQ13523 1007 aaKnown RBP16.3■□□□□ 0.2
CLCN1-201ENST00000343257 ZCRB1Q8TBF4 217 aaKnown RBP16.3■□□□□ 0.2
CLCN1-201ENST00000343257 KCNV2Q8TDN2 545 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 CHMP6Q96FZ7 201 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 TSKSQ9UJT2 592 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 ASAP1Q9ULH1 1129 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 LCA5LO95447 670 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 SHBGP04278 402 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 CHN1P15882 459 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 SLCO1A2P46721 670 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 KCNJ2P63252 427 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 KLHL30Q0D2K2 578 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 PPP2R5BQ15173 497 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 NAB2Q15742 525 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 EMC10Q5UCC4 262 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 NELFCDQ8IXH7 590 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 AGAP11Q8TF27 550 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 LMBR1Q8WVP7 490 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 GGA2Q9UJY4 613 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 PCDHA6Q9UN73 950 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 PCDHA4Q9UN74 947 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 PCDHA8Q9Y5H6 950 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 SCN11AQ9UI33 1791 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 ORC4O43929 436 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 FGFR2P21802 821 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 CCDC84Q86UT8 332 aaPredicted RBP16.29■□□□□ 0.2
CLCN1-201ENST00000343257 TAX1BP1Q86VP1 789 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 LRRC34Q8IZ02 419 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 SPICE1Q8N0Z3 855 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 RNF10Q8N5U6 811 aaKnown RBP16.29■□□□□ 0.2
CLCN1-201ENST00000343257 XPO6Q96QU8 1125 aaKnown RBP16.29■□□□□ 0.2
CLCN1-201ENST00000343257 PSMD1Q99460 953 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 PLA2G12BQ9BX93 195 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 MYH2Q9UKX2 1941 aa16.29■□□□□ 0.2
CLCN1-201ENST00000343257 A0A0G2JS52 829 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 TRAF5O00463 557 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 MMEP08473 750 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 RCAN1P53805 252 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 CNNM4Q6P4Q7 775 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 MGARPQ8TDB4 240 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 YIPF3Q9GZM5 350 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 PNPLA7Q6ZV29 1317 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 DISP2A7MBM2 1401 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 PPIP5K2O43314 1243 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 CALM1P0DP23 149 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 CALM2P0DP24 149 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 CALM3P0DP25 149 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 DZIP3Q86Y13 1208 aaKnown RBP16.28■□□□□ 0.2
CLCN1-201ENST00000343257 RNF217Q8TC41 542 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 ZBTB10Q96DT7 871 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 VAT1LQ9HCJ6 419 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 ABCF3Q9NUQ8 709 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 RNF14Q9UBS8 474 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 AGAP1Q9UPQ3 857 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 THRAP3Q9Y2W1 955 aaKnown RBP16.28■□□□□ 0.2
CLCN1-201ENST00000343257 MYMKA6NI61 221 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 CCDC38Q502W7 563 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 LRIG3Q6UXM1 1119 aa16.28■□□□□ 0.2
CLCN1-201ENST00000343257 GIGYF2Q6Y7W6 1299 aaKnown RBP16.28■□□□□ 0.2
CLCN1-201ENST00000343257 ACTN1P12814 892 aa16.27■□□□□ 0.2
CLCN1-201ENST00000343257 CALML3P27482 149 aa16.27■□□□□ 0.2
CLCN1-201ENST00000343257 CACNB1Q02641 598 aaPredicted RBP16.27■□□□□ 0.2
CLCN1-201ENST00000343257 BIRC3Q13489 604 aa16.27■□□□□ 0.2
CLCN1-201ENST00000343257 MLXIPLQ9NP71 852 aa16.27■□□□□ 0.2
CLCN1-201ENST00000343257 NOC2LQ9Y3T9 749 aaKnown RBP16.27■□□□□ 0.2
CLCN1-201ENST00000343257 UBAP2Q5T6F2 1119 aaKnown RBP16.27■□□□□ 0.19
CLCN1-201ENST00000343257 TBC1D22AQ8WUA7 517 aa16.27■□□□□ 0.19
CLCN1-201ENST00000343257 PRMT1Q99873 361 aaKnown RBP16.27■□□□□ 0.19
CLCN1-201ENST00000343257 CCSER1Q9C0I3 900 aa16.27■□□□□ 0.19
CLCN1-201ENST00000343257 PDE8AO60658 829 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 KIF4AO95239 1232 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 LACTB2Q53H82 288 aaPredicted RBP16.26■□□□□ 0.19
CLCN1-201ENST00000343257 CENPPQ6IPU0 288 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 BZW1Q7L1Q6 419 aaKnown RBP16.26■□□□□ 0.19
CLCN1-201ENST00000343257 METTL13Q8N6R0 699 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 ANKS1AQ92625 1134 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 DNAJC8O75937 253 aaPredicted RBP16.26■□□□□ 0.19
CLCN1-201ENST00000343257 DDAH1O94760 285 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 SERPING1P05155 500 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 IFI35P80217 286 aaPredicted RBP16.26■□□□□ 0.19
CLCN1-201ENST00000343257 LRRC14Q15048 493 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 DAAM2Q86T65 1068 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 ANKS4BQ8N8V4 417 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 PARD3BQ8TEW8 1205 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 GJA10Q969M2 543 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 KDM4CQ9H3R0 1056 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 TRPC6Q9Y210 931 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 FLT1P17948 1338 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 NOL4O94818 638 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 SV2BQ7L1I2 683 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms