RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 FGGP02679 453 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 SERPING1P05155 500 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 IRAK1P51617 712 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 PKN1Q16512 942 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 SYCE1Q8N0S2 351 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 THOC1Q96FV9 657 aaKnown RBP13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 NKIRAS1Q9NYS0 192 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 ANO9A1A5B4 782 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 ECM2O94769 699 aaPredicted RBP13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 GDF11O95390 407 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 GNA14O95837 355 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 SRGNP10124 158 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 ACTN1P12814 892 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 APBA1Q02410 837 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 TRIP13Q15645 432 aaPredicted RBP13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 UNC13DQ70J99 1090 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 VSIG1Q86XK7 387 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 BARHL2Q9NY43 387 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 TBK1Q9UHD2 729 aa13.58□□□□□ -0.24
SNRNP48-201ENST00000342415 RNF225M0QZC1 329 aaPredicted RBP13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 KCNH2Q12809 1159 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 TBX2Q13207 712 aaPredicted RBP13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 ODR4Q5SWX8 454 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 LRRC31Q6UY01 552 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 ZNF365Q70YC5 407 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 PLA2G12BQ9BX93 195 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 RIC8AQ9NPQ8 531 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 TMEM51Q9NW97 253 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 AMACRQ9UHK6 382 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 SNX24Q9Y343 169 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 CNTNAP5Q8WYK1 1306 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 POTEFA5A3E0 1075 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 POTEIP0CG38 1075 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 MYCLP12524 364 aaPredicted RBP13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 TBC1D9BQ66K14 1250 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 HIBCHQ6NVY1 386 aaPredicted RBP13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 POTEGQ6S5H5 508 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 POTEEQ6S8J3 1075 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 RAB17Q9H0T7 212 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 EHMT1Q9H9B1 1298 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 DAAM1Q9Y4D1 1078 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 A0A1W2PQC6 194 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 ZSCAN5CA6NGD5 496 aaPredicted RBP13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 GAS7O60861 476 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 IFNB1P01574 187 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 MTMR3Q13615 1198 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 SLFN13Q68D06 897 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 STK17AQ9UEE5 414 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 SWAP70Q9UH65 585 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 DLG5Q8TDM6 1919 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 SIGLEC1Q9BZZ2 1709 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 MYMKA6NI61 221 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 AFPP02771 609 aaKnown RBP13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 SARSP49591 514 aaKnown RBP13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 CDKAL1Q5VV42 579 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 IQCDQ96DY2 449 aa13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 STMN4Q9H169 189 aaPredicted RBP13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 INTS9Q9NV88 658 aaKnown RBP13.57□□□□□ -0.24
SNRNP48-201ENST00000342415 FAM205AQ6ZU69 1335 aa13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 MYL1P05976 194 aa13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 MDM2Q00987 491 aaPredicted RBP13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 ALS2CLQ60I27 953 aa13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 ARL8AQ96BM9 186 aa13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 MAGEF1Q9HAY2 307 aa13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 GGT7Q9UJ14 662 aa13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 IKBKGQ9Y6K9 419 aa13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 MAGOHP61326 146 aaKnown RBP13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 LRRC63Q05C16 580 aa13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 TTBK2Q6IQ55 1244 aa13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 INTS8Q75QN2 995 aaKnown RBP13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 SERPINB13Q9UIV8 391 aa13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 KDM3AQ9Y4C1 1321 aa13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 HERVK_113P62684 666 aa13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 COASYQ13057 564 aa13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 RSRC1Q96IZ7 334 aaKnown RBP13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 RABGAP1Q9Y3P9 1069 aa13.56□□□□□ -0.24
SNRNP48-201ENST00000342415 EIF4E1BA6NMX2 242 aaKnown RBP13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 DAPK3O43293 454 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 DLATP10515 647 aaKnown RBP13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 KRT15P19012 456 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 CTTNQ14247 550 aaKnown RBP13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 FAM186BQ8IYM0 893 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 MICAL1Q8TDZ2 1067 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 SYNCQ9H7C4 482 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 ITIH6Q6UXX5 1313 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 MMS22LQ6ZRQ5 1243 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 GIMAP8Q8ND71 665 aaPredicted RBP13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 HNRNPLLQ8WVV9 542 aaKnown RBP13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 RBM17Q96I25 401 aaKnown RBP13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 ZIM3Q96PE6 472 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 SH2D3AQ9BRG2 576 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 TCRBV5S4A2TA0A5A2 114 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 USP17L10C9JJH3 530 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 PSMD14O00487 310 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 RHOBTB3O94955 611 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 BCRP11274 1271 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 TMOD1P28289 359 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 STX2P32856 288 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 CERKLQ49MI3 558 aaPredicted RBP13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 ZNF746Q6NUN9 644 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms