RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 H3BRB1 525 aa19.7■□□□□ 0.74
TRA2B-202ENST00000342294 SORBS3O60504 671 aa19.7■□□□□ 0.74
TRA2B-202ENST00000342294 TBX10O75333 385 aa19.7■□□□□ 0.74
TRA2B-202ENST00000342294 SMIM10L2AP0DMW4 78 aa19.7■□□□□ 0.74
TRA2B-202ENST00000342294 SMIM10L2BP0DMW5 78 aa19.7■□□□□ 0.74
TRA2B-202ENST00000342294 CTNNB1P35222 781 aa19.7■□□□□ 0.74
TRA2B-202ENST00000342294 SMAD4Q13485 552 aaKnown RBP19.7■□□□□ 0.74
TRA2B-202ENST00000342294 MCMDC2Q4G0Z9 681 aa19.7■□□□□ 0.74
TRA2B-202ENST00000342294 IER5LQ5T953 404 aa19.7■□□□□ 0.74
TRA2B-202ENST00000342294 STOX1Q6ZVD7 989 aa19.7■□□□□ 0.74
TRA2B-202ENST00000342294 VSIG10LQ86VR7 867 aa19.7■□□□□ 0.74
TRA2B-202ENST00000342294 FIBCD1Q8N539 461 aa19.7■□□□□ 0.74
TRA2B-202ENST00000342294 PNMA1Q8ND90 353 aa19.7■□□□□ 0.74
TRA2B-202ENST00000342294 ZKSCAN3Q9BRR0 538 aa19.7■□□□□ 0.74
TRA2B-202ENST00000342294 TUT1Q9H6E5 874 aaKnown RBP19.7■□□□□ 0.74
TRA2B-202ENST00000342294 JMJD4Q9H9V9 463 aa19.7■□□□□ 0.74
TRA2B-202ENST00000342294 TRIOO75962 3097 aa19.7■□□□□ 0.74
TRA2B-202ENST00000342294 CFBP00751 764 aa19.69■□□□□ 0.74
TRA2B-202ENST00000342294 CTSHP09668 335 aa19.69■□□□□ 0.74
TRA2B-202ENST00000342294 TGFB3P10600 412 aa19.69■□□□□ 0.74
TRA2B-202ENST00000342294 UBA1P22314 1058 aaKnown RBP19.69■□□□□ 0.74
TRA2B-202ENST00000342294 ASPRV1Q53RT3 343 aa19.69■□□□□ 0.74
TRA2B-202ENST00000342294 FAM26DQ5JW98 314 aa19.69■□□□□ 0.74
TRA2B-202ENST00000342294 ZNF589Q86UQ0 364 aaPredicted RBP19.69■□□□□ 0.74
TRA2B-202ENST00000342294 APBB2Q92870 758 aa19.69■□□□□ 0.74
TRA2B-202ENST00000342294 C11orf84Q9BUA3 381 aaPredicted RBP19.69■□□□□ 0.74
TRA2B-202ENST00000342294 RC3H2Q9HBD1 1191 aaKnown RBP19.69■□□□□ 0.74
TRA2B-202ENST00000342294 ST18O60284 1047 aa19.68■□□□□ 0.74
TRA2B-202ENST00000342294 MYCLP12524 364 aaPredicted RBP19.68■□□□□ 0.74
TRA2B-202ENST00000342294 GTF2F1P35269 517 aaKnown RBP eCLIP19.68■□□□□ 0.74
TRA2B-202ENST00000342294 PTPN5P54829 565 aa19.68■□□□□ 0.74
TRA2B-202ENST00000342294 ADAM15Q13444 863 aa19.68■□□□□ 0.74
TRA2B-202ENST00000342294 ESR2Q92731 530 aa19.68■□□□□ 0.74
TRA2B-202ENST00000342294 CLP1Q92989 425 aaKnown RBP19.68■□□□□ 0.74
TRA2B-202ENST00000342294 MAP3K20Q9NYL2 800 aaKnown RBP19.68■□□□□ 0.74
TRA2B-202ENST00000342294 CD207Q9UJ71 328 aa19.68■□□□□ 0.74
TRA2B-202ENST00000342294 NEDD4P46934 1319 aa19.68■□□□□ 0.74
TRA2B-202ENST00000342294 RALGAPA2Q2PPJ7 1873 aa19.67■□□□□ 0.74
TRA2B-202ENST00000342294 STXBP3O00186 592 aa19.67■□□□□ 0.74
TRA2B-202ENST00000342294 LINC01565O15544 149 aa19.67■□□□□ 0.74
TRA2B-202ENST00000342294 LGALS2P05162 132 aa19.67■□□□□ 0.74
TRA2B-202ENST00000342294 ADAM17P78536 824 aa19.67■□□□□ 0.74
TRA2B-202ENST00000342294 CAMK1Q14012 370 aa19.67■□□□□ 0.74
TRA2B-202ENST00000342294 PGM5Q15124 567 aa19.67■□□□□ 0.74
TRA2B-202ENST00000342294 TRIM67Q6ZTA4 783 aa19.67■□□□□ 0.74
TRA2B-202ENST00000342294 TICAM2Q86XR7 235 aa19.67■□□□□ 0.74
TRA2B-202ENST00000342294 IL31RAQ8NI17 732 aa19.67■□□□□ 0.74
TRA2B-202ENST00000342294 GPKOWQ92917 476 aaPredicted RBP eCLIP19.67■□□□□ 0.74
TRA2B-202ENST00000342294 MSLNLQ96KJ4 702 aa19.67■□□□□ 0.74
TRA2B-202ENST00000342294 RNF41Q9H4P4 317 aaPredicted RBP19.67■□□□□ 0.74
TRA2B-202ENST00000342294 BCAS3Q9H6U6 928 aa19.67■□□□□ 0.74
TRA2B-202ENST00000342294 ALG13Q9NP73 1137 aaKnown RBP19.67■□□□□ 0.74
TRA2B-202ENST00000342294 RWDD3Q9Y3V2 267 aa19.67■□□□□ 0.74
TRA2B-202ENST00000342294 PCDHB15Q9Y5E8 787 aa19.67■□□□□ 0.74
TRA2B-202ENST00000342294 NLRC5Q86WI3 1866 aa19.67■□□□□ 0.74
TRA2B-202ENST00000342294 MYH7BA7E2Y1 1941 aa19.66■□□□□ 0.74
TRA2B-202ENST00000342294 TMEM221A6NGB7 291 aa19.66■□□□□ 0.74
TRA2B-202ENST00000342294 M0R296 226 aa19.66■□□□□ 0.74
TRA2B-202ENST00000342294 EYA4O95677 639 aa19.66■□□□□ 0.74
TRA2B-202ENST00000342294 TCF15Q12870 199 aa19.66■□□□□ 0.74
TRA2B-202ENST00000342294 PKN1Q16512 942 aa19.66■□□□□ 0.74
TRA2B-202ENST00000342294 CCDC178Q5BJE1 867 aa19.66■□□□□ 0.74
TRA2B-202ENST00000342294 PRRX2Q99811 253 aa19.66■□□□□ 0.74
TRA2B-202ENST00000342294 KAT14Q9H8E8 782 aa19.66■□□□□ 0.74
TRA2B-202ENST00000342294 MLXIPQ9HAP2 919 aa19.66■□□□□ 0.74
TRA2B-202ENST00000342294 VAT1LQ9HCJ6 419 aa19.66■□□□□ 0.74
TRA2B-202ENST00000342294 SETD4Q9NVD3 440 aa19.66■□□□□ 0.74
TRA2B-202ENST00000342294 ATG2AQ2TAZ0 1938 aa19.66■□□□□ 0.74
TRA2B-202ENST00000342294 PPP1R11O60927 126 aaPredicted RBP19.65■□□□□ 0.74
TRA2B-202ENST00000342294 MMP1P03956 469 aa19.65■□□□□ 0.74
TRA2B-202ENST00000342294 NT5C2P49902 561 aa19.65■□□□□ 0.74
TRA2B-202ENST00000342294 SAMD3Q8N6K7 520 aa19.65■□□□□ 0.74
TRA2B-202ENST00000342294 PBXIP1Q96AQ6 731 aa19.65■□□□□ 0.74
TRA2B-202ENST00000342294 ZNF689Q96CS4 500 aaPredicted RBP19.65■□□□□ 0.74
TRA2B-202ENST00000342294 AMNQ9BXJ7 453 aa19.65■□□□□ 0.74
TRA2B-202ENST00000342294 ADGRA3Q8IWK6 1321 aa19.65■□□□□ 0.74
TRA2B-202ENST00000342294 C5orf42Q9H799 3197 aa19.64■□□□□ 0.73
TRA2B-202ENST00000342294 LOC730098B7Z3J9 87 aa19.64■□□□□ 0.73
TRA2B-202ENST00000342294 CHRNA1P02708 482 aa19.64■□□□□ 0.73
TRA2B-202ENST00000342294 PARP1P09874 1014 aaKnown RBP19.64■□□□□ 0.73
TRA2B-202ENST00000342294 NMIQ13287 307 aaPredicted RBP19.64■□□□□ 0.73
TRA2B-202ENST00000342294 IQCA1Q86XH1 822 aa19.64■□□□□ 0.73
TRA2B-202ENST00000342294 MTMR8Q96EF0 704 aa19.64■□□□□ 0.73
TRA2B-202ENST00000342294 ZFP91Q96JP5 570 aaPredicted RBP19.64■□□□□ 0.73
TRA2B-202ENST00000342294 PLVAPQ9BX97 442 aa19.64■□□□□ 0.73
TRA2B-202ENST00000342294 USP26Q9BXU7 913 aa19.64■□□□□ 0.73
TRA2B-202ENST00000342294 IGFLR1Q9H665 355 aa19.64■□□□□ 0.73
TRA2B-202ENST00000342294 EHMT1Q9H9B1 1298 aa19.64■□□□□ 0.73
TRA2B-202ENST00000342294 PLAGL2Q9UPG8 496 aa19.64■□□□□ 0.73
TRA2B-202ENST00000342294 CCDC171Q6TFL3 1326 aa19.64■□□□□ 0.73
TRA2B-202ENST00000342294 DHX16O60231 1041 aaKnown RBP19.63■□□□□ 0.73
TRA2B-202ENST00000342294 KDM4AO75164 1064 aa19.63■□□□□ 0.73
TRA2B-202ENST00000342294 GNAT1P11488 350 aa19.63■□□□□ 0.73
TRA2B-202ENST00000342294 HOXA13P31271 388 aaPredicted RBP19.63■□□□□ 0.73
TRA2B-202ENST00000342294 ZXDAP98168 799 aa19.63■□□□□ 0.73
TRA2B-202ENST00000342294 CBX2Q14781 532 aaPredicted RBP19.63■□□□□ 0.73
TRA2B-202ENST00000342294 ENAHQ8N8S7 591 aaPredicted RBP19.63■□□□□ 0.73
TRA2B-202ENST00000342294 ZSCAN10Q96SZ4 725 aaPredicted RBP19.63■□□□□ 0.73
TRA2B-202ENST00000342294 CLEC1BQ9P126 229 aa19.63■□□□□ 0.73
TRA2B-202ENST00000342294 ENPP3O14638 875 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms