RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 RFX5P48382 616 aaPredicted RBP14.07□□□□□ -0.16
LIN54-201ENST00000340417 IFFO1Q0D2I5 559 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 SURF1Q15526 300 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 IER5Q5VY09 327 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 THNSL1Q8IYQ7 743 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 ZC3H15Q8WU90 426 aaKnown RBP14.07□□□□□ -0.16
LIN54-201ENST00000340417 RNF208Q9H0X6 261 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 SMARCAD1Q9H4L7 1026 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 PCIF1Q9H4Z3 704 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 LY9Q9HBG7 655 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 NECTIN1Q15223 517 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 PIGOQ8TEQ8 1089 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 MTA3Q9BTC8 594 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 IFNKQ9P0W0 207 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 FAM20AQ96MK3 541 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 ZNF830Q96NB3 372 aaPredicted RBP14.07□□□□□ -0.16
LIN54-201ENST00000340417 MIS12Q9H081 205 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 CLIC4Q9Y696 253 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 STK10O94804 968 aaKnown RBP14.07□□□□□ -0.16
LIN54-201ENST00000340417 STAG2Q8N3U4 1231 aa14.07□□□□□ -0.16
LIN54-201ENST00000340417 METTL14Q9HCE5 456 aaKnown RBP14.07□□□□□ -0.16
LIN54-201ENST00000340417 NR3C2P08235 984 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 SLFN12LQ6IEE8 588 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 PPM1KQ8N3J5 372 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 C2orf40Q9H1Z8 148 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 STK17AQ9UEE5 414 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 RPN1P04843 607 aaKnown RBP14.06□□□□□ -0.16
LIN54-201ENST00000340417 QARSP47897 775 aaKnown RBP14.06□□□□□ -0.16
LIN54-201ENST00000340417 BFSP1Q12934 665 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 PCSK9Q8NBP7 692 aaKnown RBP14.06□□□□□ -0.16
LIN54-201ENST00000340417 BHMT2Q9H2M3 363 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 TAB2Q9NYJ8 693 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 PPATQ06203 517 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 C1orf228Q6PIY5 440 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 TRMT44Q8IYL2 757 aaKnown RBP14.06□□□□□ -0.16
LIN54-201ENST00000340417 AGBL1Q96MI9 1066 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 ZNF609O15014 1411 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 P4HBP07237 508 aaKnown RBP14.06□□□□□ -0.16
LIN54-201ENST00000340417 ACER1Q8TDN7 264 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 BARHL2Q9NY43 387 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 TTLL3Q9Y4R7 772 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 PCDHA10Q9Y5I2 948 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 ATRNO75882 1429 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 PSMC5P62195 406 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 FKBP1AP62942 108 aaKnown RBP14.06□□□□□ -0.16
LIN54-201ENST00000340417 NEK9Q8TD19 979 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 DYDC2Q96IM9 177 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 RIC8AQ9NPQ8 531 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 GDAQ9Y2T3 454 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 SIGLEC1Q9BZZ2 1709 aa14.06□□□□□ -0.16
LIN54-201ENST00000340417 KRT86O43790 486 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 PPP2R3AQ06190 1150 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 NXF1Q9UBU9 619 aaKnown RBP14.05□□□□□ -0.16
LIN54-201ENST00000340417 ZNF568Q3ZCX4 644 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 SOCS4Q8WXH5 440 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 SEPT1Q8WYJ6 367 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 HMX1Q9NP08 348 aaPredicted RBP14.05□□□□□ -0.16
LIN54-201ENST00000340417 STARD7Q9NQZ5 370 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 TERF1P54274 439 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 NLRP12P59046 1061 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 SP3Q02447 781 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 FMN2Q9NZ56 1722 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 RASAL2Q9UJF2 1139 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 LONRF3Q496Y0 759 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 CNGA4Q8IV77 575 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 TRPM4Q8TD43 1214 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 CLSTN2Q9H4D0 955 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 KIF9Q9HAQ2 790 aa14.05□□□□□ -0.16
LIN54-201ENST00000340417 SYNJ2BP-COX16A0A087WUM0 186 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 DDTLA6NHG4 134 aaPredicted RBP14.04□□□□□ -0.16
LIN54-201ENST00000340417 E7EVH7 732 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 FKBP1BP68106 108 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 SEL1L2Q5TEA6 688 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 SCYL2Q6P3W7 929 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 GBP6Q6ZN66 633 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 CCDC91Q7Z6B0 441 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 MB21D2Q8IYB1 491 aaPredicted RBP14.04□□□□□ -0.16
LIN54-201ENST00000340417 AIFM3Q96NN9 605 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 LSM14BQ9BX40 385 aaKnown RBP14.04□□□□□ -0.16
LIN54-201ENST00000340417 RTFDC1Q9BY42 306 aaPredicted RBP14.04□□□□□ -0.16
LIN54-201ENST00000340417 COX16Q9P0S2 106 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 FAM205AQ6ZU69 1335 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 MCM6Q14566 821 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 DDX12PQ92771 950 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 FZD1Q9UP38 647 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 RCAN1P53805 252 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 HERVK_113P62684 666 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 LAMC2Q13753 1193 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 NUP58Q9BVL2 599 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 WDR19Q8NEZ3 1342 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 CDC42EP1Q00587 391 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 ALCAMQ13740 583 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 CCDC14Q49A88 953 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 BCL2L12Q9HB09 334 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 CTTNBP2NLQ9P2B4 639 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 PCDHB4Q9Y5E5 795 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 CLDN3O15551 220 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 KIF23Q02241 960 aaPredicted RBP14.04□□□□□ -0.16
LIN54-201ENST00000340417 PADI6Q6TGC4 694 aa14.04□□□□□ -0.16
LIN54-201ENST00000340417 TTC30AQ86WT1 665 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms