RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 PCDHGC5Q9Y5F6 944 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 PP2D1A8MPX8 630 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 SART1O43290 800 aaKnown RBP10.31□□□□□ -0.76
NECAP1-201ENST00000339754 CSF1RP07333 972 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 KLRC1P26715 233 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 ABL2P42684 1182 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 EVA1CP58658 441 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 KCNJ2P63252 427 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 PDXDC1Q6P996 788 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 STAG2Q8N3U4 1231 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 ANKS4BQ8N8V4 417 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 TTLL11Q8NHH1 800 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 TNKSO95271 1327 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 CTNND1O60716 968 aaKnown RBP10.31□□□□□ -0.76
NECAP1-201ENST00000339754 NQO1P15559 274 aaKnown RBP10.31□□□□□ -0.76
NECAP1-201ENST00000339754 PHKA1P46020 1223 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 MTMR3Q13615 1198 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 RBBP5Q15291 538 aaKnown RBP10.31□□□□□ -0.76
NECAP1-201ENST00000339754 FAM133BQ5BKY9 247 aaKnown RBP10.31□□□□□ -0.76
NECAP1-201ENST00000339754 METTL24Q5JXM2 366 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 TRPM8Q7Z2W7 1104 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 ZCRB1Q8TBF4 217 aaKnown RBP10.31□□□□□ -0.76
NECAP1-201ENST00000339754 PLIN2Q99541 437 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 SEMA6BQ9H3T3 888 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 BSDC1Q9NW68 430 aaPredicted RBP10.31□□□□□ -0.76
NECAP1-201ENST00000339754 GLI3P10071 1580 aa10.31□□□□□ -0.76
NECAP1-201ENST00000339754 CES2O00748 559 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 FESP07332 822 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 VEGFAP15692 232 aaPredicted RBP10.3□□□□□ -0.76
NECAP1-201ENST00000339754 CCND1P24385 295 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 ARID4AP29374 1257 aaPredicted RBP10.3□□□□□ -0.76
NECAP1-201ENST00000339754 RAB27AP51159 221 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 SNX1Q13596 522 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 KRT71Q3SY84 523 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 TMC3Q7Z5M5 1100 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 SPICE1Q8N0Z3 855 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 MAGEB6Q8N7X4 407 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 ATXN2LQ8WWM7 1075 aaKnown RBP10.3□□□□□ -0.76
NECAP1-201ENST00000339754 YIPF3Q9GZM5 350 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 RTL9Q8NET4 1388 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 COL5A2P05997 1499 aaPredicted RBP10.3□□□□□ -0.76
NECAP1-201ENST00000339754 A0A0G2JS52 829 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 F8VZ95 297 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 TLR2O60603 784 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 RARAP10276 462 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 FCER1AP12319 257 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 CHN1P15882 459 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 PDE6BP35913 854 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 ALDH5A1P51649 535 aaPredicted RBP10.3□□□□□ -0.76
NECAP1-201ENST00000339754 CCNG1P51959 295 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 PDE4DQ08499 809 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 SF3A3Q12874 501 aaKnown RBP eCLIP10.3□□□□□ -0.76
NECAP1-201ENST00000339754 IFIT5Q13325 482 aaKnown RBP10.3□□□□□ -0.76
NECAP1-201ENST00000339754 HLFQ16534 295 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 KCTD19Q17RG1 926 aaPredicted RBP10.3□□□□□ -0.76
NECAP1-201ENST00000339754 CCDC84Q86UT8 332 aaPredicted RBP10.3□□□□□ -0.76
NECAP1-201ENST00000339754 LRRC34Q8IZ02 419 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 VGLL2Q8N8G2 317 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 ENAHQ8N8S7 591 aaPredicted RBP10.3□□□□□ -0.76
NECAP1-201ENST00000339754 ISCA1Q9BUE6 129 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 ADAM7Q9H2U9 754 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 PNMA2Q9UL42 364 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 AFF2P51816 1311 aa10.3□□□□□ -0.76
NECAP1-201ENST00000339754 AHCYL1O43865 530 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 CAND2O75155 1236 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 RPS6KA3P51812 740 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 NCALDP61601 193 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 TROAPQ12815 778 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 TRAF1Q13077 416 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 CENPPQ6IPU0 288 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 LCORLQ8N3X6 602 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 PRCCQ92733 491 aaPredicted RBP10.29□□□□□ -0.76
NECAP1-201ENST00000339754 ELAC2Q9BQ52 826 aaKnown RBP10.29□□□□□ -0.76
NECAP1-201ENST00000339754 EDEM3Q9BZQ6 932 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 CCSER1Q9C0I3 900 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 MTFR1LQ9H019 292 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 ABCF3Q9NUQ8 709 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 MYH1P12882 1939 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 SMIM22K7EJ46 135 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 DAPK3O43293 454 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 ABCB7O75027 752 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 ZBTB48P10074 688 aaPredicted RBP10.29□□□□□ -0.76
NECAP1-201ENST00000339754 PRPHP41219 470 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 NLRP5P59047 1200 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 KCNMA1Q12791 1236 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 GALNTL6Q49A17 601 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 ERICH1Q86X53 443 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 SRBD1Q8N5C6 995 aaKnown RBP10.29□□□□□ -0.76
NECAP1-201ENST00000339754 ACTRT1Q8TDG2 376 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 SEC14L1Q92503 715 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 TXLNGYQ9BZA5 131 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 TRIM9Q9C026 710 aa10.29□□□□□ -0.76
NECAP1-201ENST00000339754 RNF41Q9H4P4 317 aaPredicted RBP10.29□□□□□ -0.76
NECAP1-201ENST00000339754 CPSF2Q9P2I0 782 aaKnown RBP10.29□□□□□ -0.76
NECAP1-201ENST00000339754 KCNK3O14649 394 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 UBOX5O94941 541 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 MMEP08473 750 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 IL2RBP14784 551 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 MMP13P45452 471 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 DHX9Q08211 1270 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms