RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 MMGT1Q8N4V1 131 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 GGA2Q9UJY4 613 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 ZNF232Q9UNY5 417 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 C1orf167Q5SNV9 1468 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 CCDC160A6NGH7 325 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 NQO1P15559 274 aaKnown RBP10.15□□□□□ -0.78
RPGR-202ENST00000339363 MAGEA1P43355 309 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 ALDH5A1P51649 535 aaPredicted RBP10.15□□□□□ -0.78
RPGR-202ENST00000339363 FAM47EQ6ZV65 393 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 TRPM8Q7Z2W7 1104 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 KRT26Q7Z3Y9 468 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 VSIG1Q86XK7 387 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 TEX9Q8N6V9 391 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 SLC17A8Q8NDX2 589 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 UHMK1Q8TAS1 419 aaKnown RBP10.15□□□□□ -0.78
RPGR-202ENST00000339363 CNNM1Q9NRU3 951 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 INTS9Q9NV88 658 aaKnown RBP10.15□□□□□ -0.78
RPGR-202ENST00000339363 V9GY48 417 aaPredicted RBP10.15□□□□□ -0.78
RPGR-202ENST00000339363 KAT6BQ8WYB5 2073 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 TRAPPC3O43617 180 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 COQ9O75208 318 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 OATP04181 439 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 HNRNPCP07910 306 aaKnown RBP eCLIP10.15□□□□□ -0.78
RPGR-202ENST00000339363 SERPINB4P48594 390 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 SOGA3Q5TF21 947 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 GALNT15Q8N3T1 639 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.15□□□□□ -0.78
RPGR-202ENST00000339363 DTNBP1Q96EV8 351 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 NHEJ1Q9H9Q4 299 aaPredicted RBP10.15□□□□□ -0.78
RPGR-202ENST00000339363 MINDY4BA8MYZ0 360 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 FLOT1O75955 427 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 PAK1Q13153 545 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 MTA1Q13330 715 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 CHADLQ6NUI6 762 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 TOM1L2Q6ZVM7 507 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 NLRP10Q86W26 655 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 TRIM22Q8IYM9 498 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 CNBD1Q8NA66 436 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 WHAMMQ8TF30 809 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 RPS6KC1Q96S38 1066 aa10.15□□□□□ -0.78
RPGR-202ENST00000339363 THRAP3Q9Y2W1 955 aaKnown RBP10.15□□□□□ -0.78
RPGR-202ENST00000339363 ZNF263O14978 683 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 PDE8BO95263 885 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 ITGB3BPQ13352 177 aaPredicted RBP10.14□□□□□ -0.79
RPGR-202ENST00000339363 DIXDC1Q155Q3 683 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 RTN1Q16799 776 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 RNF220Q5VTB9 566 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 HAUS3Q68CZ6 603 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 C6orf89Q6UWU4 347 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 FANCBQ8NB91 859 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 NELFBQ8WX92 580 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.14□□□□□ -0.79
RPGR-202ENST00000339363 SOS2Q07890 1332 aaPredicted RBP10.14□□□□□ -0.79
RPGR-202ENST00000339363 A8MUI8 341 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 PCCAP05165 728 aaPredicted RBP10.14□□□□□ -0.79
RPGR-202ENST00000339363 ZFYP08048 801 aaPredicted RBP10.14□□□□□ -0.79
RPGR-202ENST00000339363 GLI1P08151 1106 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 MAGEA8P43361 318 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 DYNLL1P63167 89 aaKnown RBP10.14□□□□□ -0.79
RPGR-202ENST00000339363 PTGDRQ13258 359 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 TMED1Q13445 227 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 AKNAD1Q5T1N1 836 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 C2CD5Q86YS7 1000 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 ZNF654Q8IZM8 581 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 PROCA1Q8NCQ7 364 aaPredicted RBP10.14□□□□□ -0.79
RPGR-202ENST00000339363 SNRNP27Q8WVK2 155 aaKnown RBP10.14□□□□□ -0.79
RPGR-202ENST00000339363 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.14□□□□□ -0.79
RPGR-202ENST00000339363 TANGO6Q9C0B7 1094 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 IQCGQ9H095 443 aaKnown RBP10.14□□□□□ -0.79
RPGR-202ENST00000339363 NAPBQ9H115 298 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 GALNT8Q9NY28 637 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 MYH13Q9UKX3 1938 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 KIF1AQ12756 1690 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 ALS2Q96Q42 1657 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.14□□□□□ -0.79
RPGR-202ENST00000339363 EPHB6O15197 1021 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 MYL1P05976 194 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 ZC3H18Q86VM9 953 aaKnown RBP10.14□□□□□ -0.79
RPGR-202ENST00000339363 ENAHQ8N8S7 591 aaPredicted RBP10.14□□□□□ -0.79
RPGR-202ENST00000339363 RETREG2Q8NC44 543 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 PIGBQ92521 554 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 PHACTR1Q9C0D0 580 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 MMRN2Q9H8L6 949 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 INTUQ9ULD6 942 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 JAG2Q9Y219 1238 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 FAM205AQ6ZU69 1335 aa10.14□□□□□ -0.79
RPGR-202ENST00000339363 FAM170AA1A519 330 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 UBOX5O94941 541 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 GHRP10912 638 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 IMPDH2P12268 514 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 IGHMBP2P38935 993 aaKnown RBP10.13□□□□□ -0.79
RPGR-202ENST00000339363 PRCPP42785 496 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 INF2Q27J81 1249 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 NUGGCQ68CJ6 796 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 BICDL1Q6ZP65 573 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 INTS8Q75QN2 995 aaKnown RBP10.13□□□□□ -0.79
RPGR-202ENST00000339363 ZBTB38Q8NAP3 1195 aaPredicted RBP10.13□□□□□ -0.79
RPGR-202ENST00000339363 SPATA5Q8NB90 893 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 OPTNQ96CV9 577 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 DPH5Q9H2P9 285 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms