RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 CTAGE1Q96RT6 745 aa25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 BMP2KQ9NSY1 1161 aaPredicted RBP25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 RNF146Q9NTX7 359 aa25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 PANK4Q9NVE7 773 aa25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 RPTORQ8N122 1335 aa25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 DDX39AO00148 427 aaKnown RBP25■■□□□ 1.59
PDLIM2-203ENST00000339162 CCNE1P24864 410 aa25■■□□□ 1.59
PDLIM2-203ENST00000339162 COASYQ13057 564 aa25■■□□□ 1.59
PDLIM2-203ENST00000339162 ARSHQ5FYA8 562 aa25■■□□□ 1.59
PDLIM2-203ENST00000339162 DPY19L2Q6NUT2 758 aa25■■□□□ 1.59
PDLIM2-203ENST00000339162 RNF207Q6ZRF8 634 aa25■■□□□ 1.59
PDLIM2-203ENST00000339162 CATSPERGQ6ZRH7 1159 aa25■■□□□ 1.59
PDLIM2-203ENST00000339162 CSGALNACT2Q8N6G5 542 aa25■■□□□ 1.59
PDLIM2-203ENST00000339162 REPS2Q8NFH8 660 aa25■■□□□ 1.59
PDLIM2-203ENST00000339162 SEMA6BQ9H3T3 888 aa25■■□□□ 1.59
PDLIM2-203ENST00000339162 LIMA1Q9UHB6 759 aaKnown RBP25■■□□□ 1.59
PDLIM2-203ENST00000339162 DNM3Q9UQ16 869 aa25■■□□□ 1.59
PDLIM2-203ENST00000339162 IPO5O00410 1097 aaKnown RBP25■■□□□ 1.59
PDLIM2-203ENST00000339162 EHHADHQ08426 723 aa25■■□□□ 1.59
PDLIM2-203ENST00000339162 N4BP3O15049 544 aa24.99■■□□□ 1.59
PDLIM2-203ENST00000339162 PPP1R12BO60237 982 aaPredicted RBP24.99■■□□□ 1.59
PDLIM2-203ENST00000339162 MRPS9P82933 396 aaKnown RBP24.99■■□□□ 1.59
PDLIM2-203ENST00000339162 TMEM132BQ14DG7 1078 aa24.99■■□□□ 1.59
PDLIM2-203ENST00000339162 FILIP1LQ4L180 1135 aa24.99■■□□□ 1.59
PDLIM2-203ENST00000339162 TPH2Q8IWU9 490 aa24.99■■□□□ 1.59
PDLIM2-203ENST00000339162 FGFBP2Q9BYJ0 223 aa24.99■■□□□ 1.59
PDLIM2-203ENST00000339162 ZHX3Q9H4I2 956 aa24.99■■□□□ 1.59
PDLIM2-203ENST00000339162 ZNF214Q9UL59 606 aaPredicted RBP24.99■■□□□ 1.59
PDLIM2-203ENST00000339162 PARP14Q460N5 1801 aa24.99■■□□□ 1.59
PDLIM2-203ENST00000339162 KRT18P05783 430 aaKnown RBP24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 COPB1P53618 953 aaKnown RBP24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 GHRHRQ02643 423 aa24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 TBX2Q13207 712 aaPredicted RBP24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 BAATQ14032 418 aaPredicted RBP24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 PIGOQ8TEQ8 1089 aa24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 DYDC2Q96IM9 177 aa24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 UNC45AQ9H3U1 944 aa24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 POLD4Q9HCU8 107 aa24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 KCNH7Q9NS40 1196 aa24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 PEX10O60683 326 aa24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 MYCLP12524 364 aaPredicted RBP24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 ADKP55263 362 aaKnown RBP24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 SETQ01105 290 aaPredicted RBP24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 PPP2R5CQ13362 524 aa24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 PLS1Q14651 629 aa24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 HSD17B14Q9BPX1 270 aa24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 BHMT2Q9H2M3 363 aa24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 RLFQ13129 1914 aa24.98■■□□□ 1.59
PDLIM2-203ENST00000339162 LRRC10BA6NIK2 292 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 USP27XA6NNY8 438 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 ZBTB39O15060 712 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 SLC26A4O43511 780 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 SLITRK3O94933 977 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 FDX1P10109 184 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 SPAG1Q07617 926 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 TREML2Q5T2D2 321 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 RMDN3Q96TC7 470 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 POLR3CQ9BUI4 534 aaPredicted RBP24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 ELP3Q9H9T3 547 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 ADAMTS5Q9UNA0 930 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 CSADQ9Y600 493 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 BICDL2A1A5D9 508 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 EPHX2P34913 555 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 ANKRD20A12PQ8NF67 263 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 CLMNQ96JQ2 1002 aa24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 COL11A1P12107 1806 aaPredicted RBP24.97■■□□□ 1.59
PDLIM2-203ENST00000339162 PGM5Q15124 567 aa24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 GPR162Q16538 588 aa24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 PCNX4Q63HM2 1172 aa24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 CEP135Q66GS9 1140 aa24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 SYT2Q8N9I0 419 aaPredicted RBP24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 CPLX3Q8WVH0 158 aa24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 THAP9Q9H5L6 903 aa24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 SPDYE16A6NNV3 312 aaPredicted RBP24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 PBX1P40424 430 aa24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 TKFCQ3LXA3 575 aa24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 COBLL1Q53SF7 1204 aa24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 HERC4Q5GLZ8 1057 aaPredicted RBP24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 FAM26FQ5R3K3 315 aa24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 CENPPQ6IPU0 288 aa24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 TEKT3Q9BXF9 490 aa24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 RABGAP1Q9Y3P9 1069 aa24.96■■□□□ 1.59
PDLIM2-203ENST00000339162 CCDC65Q8IXS2 484 aa24.95■■□□□ 1.58
PDLIM2-203ENST00000339162 CDCA5Q96FF9 252 aa24.95■■□□□ 1.58
PDLIM2-203ENST00000339162 GTPBP4Q9BZE4 634 aaKnown RBP24.95■■□□□ 1.58
PDLIM2-203ENST00000339162 TRMT1Q9NXH9 659 aaKnown RBP24.95■■□□□ 1.58
PDLIM2-203ENST00000339162 WRAP73Q9P2S5 460 aaPredicted RBP24.95■■□□□ 1.58
PDLIM2-203ENST00000339162 STK24Q9Y6E0 443 aa24.95■■□□□ 1.58
PDLIM2-203ENST00000339162 PES1O00541 588 aaKnown RBP24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 NKRFO15226 690 aaKnown RBP eCLIP24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 PPP1R2P41236 205 aa24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 PSMD2Q13200 908 aa24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 TTLL12Q14166 644 aaPredicted RBP24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 EAPPQ56P03 285 aaPredicted RBP24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 ARHGEF16Q5VV41 709 aa24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 GUF1Q8N442 669 aaKnown RBP24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 OTUD5Q96G74 571 aa24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 REEP2Q9BRK0 252 aa24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 BCAS3Q9H6U6 928 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms