RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 CHURC1Q8WUH1 139 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 CRYGNQ8WXF5 182 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 CAPNS2Q96L46 248 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 MBOAT7Q96N66 472 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 NUDT12Q9BQG2 462 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 DOCK1Q14185 1865 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 OTOFQ9HC10 1997 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 PVALEFA0A1B0GWK0 134 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 MYMKA6NI61 221 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 AKR1B15C9JRZ8 316 aaPredicted RBP12.36□□□□□ -0.43
LRP1-202ENST00000338962 STX10O60499 249 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 EEF1GP26641 437 aaKnown RBP12.36□□□□□ -0.43
LRP1-202ENST00000338962 HOXA13P31271 388 aaPredicted RBP12.36□□□□□ -0.43
LRP1-202ENST00000338962 PBX1P40424 430 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 COPB1P53618 953 aaKnown RBP12.36□□□□□ -0.43
LRP1-202ENST00000338962 PMS1P54277 932 aaKnown RBP12.36□□□□□ -0.43
LRP1-202ENST00000338962 HMGCS2P54868 508 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 UNC13DQ70J99 1090 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 CSGALNACT2Q8N6G5 542 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 KIFC2Q96AC6 838 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 P2RX7Q99572 595 aaKnown RBP12.36□□□□□ -0.43
LRP1-202ENST00000338962 FEZ1Q99689 392 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 VPS16Q9H269 839 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 THAP9Q9H5L6 903 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 TAB2Q9NYJ8 693 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 MAGEC2Q9UBF1 373 aaPredicted RBP12.36□□□□□ -0.43
LRP1-202ENST00000338962 ITIH6Q6UXX5 1313 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 PIK3CDO00329 1044 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 RIOK3O14730 519 aaKnown RBP12.35□□□□□ -0.43
LRP1-202ENST00000338962 OPLAHO14841 1288 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 TPM1P09493 284 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 FCER1AP12319 257 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 TAL1P17542 331 aaPredicted RBP12.35□□□□□ -0.43
LRP1-202ENST00000338962 MAP2K2P36507 400 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 TM4SF4P48230 202 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 TTI2Q6NXR4 508 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 DYMQ7RTS9 669 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 FCHSD1Q86WN1 690 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 TMEM139Q8IV31 216 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 TEX2Q8IWB9 1127 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
LRP1-202ENST00000338962 NOC3LQ8WTT2 800 aaKnown RBP12.35□□□□□ -0.43
LRP1-202ENST00000338962 BRI3BPQ8WY22 251 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 P2RX5Q93086 422 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 UIMC1Q96RL1 719 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 TBX3O15119 743 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 IDEP14735 1019 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 CCNE1P24864 410 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 HOXA7P31268 230 aaPredicted RBP12.35□□□□□ -0.43
LRP1-202ENST00000338962 VEGFBP49765 207 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 Q4G0T1 1027 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 HAUS3Q68CZ6 603 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 GPAT2Q6NUI2 795 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 CCDC174Q6PII3 467 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 KCNK18Q7Z418 384 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 FAM160B2Q86V87 743 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 CNGA4Q8IV77 575 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 DDX12PQ92771 950 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 PANX2Q96RD6 677 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 SRRTQ9BXP5 876 aaKnown RBP12.35□□□□□ -0.43
LRP1-202ENST00000338962 BMP2KQ9NSY1 1161 aaPredicted RBP12.35□□□□□ -0.43
LRP1-202ENST00000338962 TMOD4Q9NZQ9 345 aa12.35□□□□□ -0.43
LRP1-202ENST00000338962 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.35□□□□□ -0.43
LRP1-202ENST00000338962 CCL15-CCL14A0A0B4J2E2 113 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 WDR46O15213 610 aaKnown RBP12.34□□□□□ -0.43
LRP1-202ENST00000338962 ZSCAN12O43309 604 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 SLC26A4O43511 780 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 CFBP00751 764 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 VCAM1P19320 739 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 ZNF76P36508 570 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 RBL2Q08999 1139 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 MKRN3Q13064 507 aaKnown RBP12.34□□□□□ -0.43
LRP1-202ENST00000338962 ECM1Q16610 540 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 CCL15Q16663 113 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 COBLL1Q53SF7 1204 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 HYIQ5T013 277 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 SAMD1Q6SPF0 538 aaPredicted RBP12.34□□□□□ -0.43
LRP1-202ENST00000338962 IRF2BP1Q8IU81 584 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 KIAA0895Q8NCT3 520 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 KIF18AQ8NI77 898 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 ETNPPLQ8TBG4 499 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 CPLX3Q8WVH0 158 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 HPS3Q969F9 1004 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 ZIC5Q96T25 663 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 PTPN18Q99952 460 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 RANBP17Q9H2T7 1088 aaKnown RBP12.34□□□□□ -0.43
LRP1-202ENST00000338962 SLC39A2Q9NP94 309 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 AGTPBP1Q9UPW5 1226 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 KIAA1024Q9UPX6 916 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 SLC45A1Q9Y2W3 748 aa12.34□□□□□ -0.43
LRP1-202ENST00000338962 FAM86B1E9PN63 330 aa12.33□□□□□ -0.44
LRP1-202ENST00000338962 PES1O00541 588 aaKnown RBP12.33□□□□□ -0.44
LRP1-202ENST00000338962 PLA2G6O60733 806 aa12.33□□□□□ -0.44
LRP1-202ENST00000338962 SSBP05455 408 aaKnown RBP eCLIP12.33□□□□□ -0.44
LRP1-202ENST00000338962 FAM86B2P0C5J1 330 aa12.33□□□□□ -0.44
LRP1-202ENST00000338962 UBXN1Q04323 297 aa12.33□□□□□ -0.44
LRP1-202ENST00000338962 DGKZQ13574 1117 aa12.33□□□□□ -0.44
LRP1-202ENST00000338962 PAXIP1Q6ZW49 1069 aaPredicted RBP12.33□□□□□ -0.44
LRP1-202ENST00000338962 ANKRD23Q86SG2 305 aa12.33□□□□□ -0.44
LRP1-202ENST00000338962 FAM114A1Q8IWE2 563 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms