RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TMEM206Q9H813 350 aa6.9□□□□□ -1.31
PRKDC-202ENST00000338368 FERP16591 822 aa6.9□□□□□ -1.31
PRKDC-202ENST00000338368 DAAM2Q86T65 1068 aa6.9□□□□□ -1.31
PRKDC-202ENST00000338368 TRERF1Q96PN7 1200 aa6.9□□□□□ -1.31
PRKDC-202ENST00000338368 ADAMTS1Q9UHI8 967 aa6.9□□□□□ -1.31
PRKDC-202ENST00000338368 DEPTORQ8TB45 409 aa6.9□□□□□ -1.31
PRKDC-202ENST00000338368 NBPF3Q9H094 633 aa6.9□□□□□ -1.31
PRKDC-202ENST00000338368 LGALS16A8MUM7 142 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 ACCSQ96QU6 501 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 MTRF1LQ9UGC7 380 aaKnown RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 NEBLO76041 1014 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 EIF4A3P38919 411 aaKnown RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 POLGP54098 1239 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 MAP2K1Q02750 393 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 STK4Q13043 487 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 NAA30Q147X3 362 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 GADL1Q6ZQY3 521 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 SYCE1Q8N0S2 351 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 PARD6BQ9BYG5 372 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 IL17RBQ9NRM6 502 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 PODXL2Q9NZ53 605 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 P4HBP07237 508 aaKnown RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 NFIAQ12857 509 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 MTF1Q14872 753 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 FAM133AQ8N9E0 248 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 PLEKHA4Q9H4M7 779 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 NRBP2Q9NSY0 501 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 NFAT5O94916 1531 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 ZBTB7AO95365 584 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 TRPC3Q13507 836 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 RASA3Q14644 834 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 LDHDQ86WU2 507 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 DCPSQ96C86 337 aaKnown RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 ZMYND15Q9H091 742 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 SORBS3O60504 671 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 STAT3P40763 770 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 COASYQ13057 564 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 SPP2Q13103 211 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 EPHA7Q15375 998 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 HOOK3Q86VS8 718 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 SMAP1Q8IYB5 467 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 PROM2Q8N271 834 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 HPS3Q969F9 1004 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 PPP1R7Q15435 360 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 RSBN1LQ6PCB5 846 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 GSTA5Q7RTV2 222 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 ATP6V0A1Q93050 837 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 ATP8B1O43520 1251 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 FXR1P51114 621 aaKnown RBP eCLIP6.89□□□□□ -1.315e-7■■■■□ 19.5
PRKDC-202ENST00000338368 RNF207Q6ZRF8 634 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 TC2NQ8N9U0 490 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 TBC1D22BQ9NU19 505 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 JRKLQ9Y4A0 524 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 N4BP1O75113 896 aaKnown RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 CEP63Q96MT8 703 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 KMT5AQ9NQR1 393 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 ZNF70Q9UC06 446 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 GINS2Q9Y248 185 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 POTEFA5A3E0 1075 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 ZEB2O60315 1214 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 POTEIP0CG38 1075 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 CD19P15391 556 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 HOXA10P31260 410 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 GBP2P32456 591 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 ACTN2P35609 894 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 ALKBH5Q6P6C2 394 aaKnown RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 POTEGQ6S5H5 508 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 POTEEQ6S8J3 1075 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 UBLCP1Q8WVY7 318 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 HINFPQ9BQA5 517 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 A0A1B0GTH6 734 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 GOLGA6L7A0A1B0GV03 622 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 OAS2P29728 719 aaKnown RBP6.89□□□□□ -1.31
PRKDC-202ENST00000338368 PTPROQ16827 1216 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 LONRF2Q1L5Z9 754 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 LIN9Q5TKA1 542 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 C7orf25Q9BPX7 421 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 SUGCTQ9HAC7 445 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 CEP83Q9Y592 693 aa6.89□□□□□ -1.31
PRKDC-202ENST00000338368 KCNJ6P48051 423 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 PEX3P56589 373 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 UBL4BQ8N7F7 174 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 FAM76AQ8TAV0 307 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 CDHR1Q96JP9 859 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 MYH6P13533 1939 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 HNRNPDLO14979 420 aaKnown RBP6.88□□□□□ -1.31
PRKDC-202ENST00000338368 DLATP10515 647 aaKnown RBP6.88□□□□□ -1.31
PRKDC-202ENST00000338368 ATRIPQ8WXE1 791 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 LRRC53A6NM62 1247 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 NR1I3Q14994 352 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 VTI1AQ96AJ9 217 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 PRMT6Q96LA8 375 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-202ENST00000338368 RSPH14Q9UHP6 348 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 PRR12Q9ULL5 1215 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 CCDC151A5D8V7 595 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 FTCDO95954 541 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 KIF11P52732 1056 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 POMGNT1Q8WZA1 660 aa6.88□□□□□ -1.31
PRKDC-202ENST00000338368 IRX2Q9BZI1 471 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-202ENST00000338368 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms