RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 USP17L8P0C7I0 530 aa13.27□□□□□ -0.28
FN1-202ENST00000336916 MTX1Q13505 466 aa13.27□□□□□ -0.28
FN1-202ENST00000336916 DIP2AQ14689 1571 aa13.27□□□□□ -0.28
FN1-202ENST00000336916 IGSF1Q8N6C5 1336 aa13.27□□□□□ -0.28
FN1-202ENST00000336916 PMLP29590 882 aa13.27□□□□□ -0.28
FN1-202ENST00000336916 ARHGEF25Q86VW2 580 aa13.27□□□□□ -0.28
FN1-202ENST00000336916 TEX12Q9BXU0 123 aa13.27□□□□□ -0.28
FN1-202ENST00000336916 C2orf40Q9H1Z8 148 aa13.27□□□□□ -0.28
FN1-202ENST00000336916 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.27□□□□□ -0.282e-7■■■■□ 25.7
FN1-202ENST00000336916 TMCC1O94876 653 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 IL9RQ01113 521 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 RAPH1Q70E73 1250 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 MTIF3Q9H2K0 278 aaKnown RBP13.27□□□□□ -0.29
FN1-202ENST00000336916 KIF9Q9HAQ2 790 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 SCINQ9Y6U3 715 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 K7ERI5 159 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 ADD2P35612 726 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 LIFRP42702 1097 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 SEL1LQ9UBV2 794 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 KCNH4Q9UQ05 1017 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 SGK1O00141 431 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 PFKFB1P16118 471 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 ME3Q16798 604 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 TTBK2Q6IQ55 1244 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 RCSD1Q6JBY9 416 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 ZNF148Q9UQR1 794 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 ECM2O94769 699 aaPredicted RBP13.27□□□□□ -0.29
FN1-202ENST00000336916 RECQLP46063 649 aaPredicted RBP13.27□□□□□ -0.29
FN1-202ENST00000336916 CEP170P1Q96L14 293 aa13.27□□□□□ -0.29
FN1-202ENST00000336916 CPSF1Q10570 1443 aaKnown RBP13.27□□□□□ -0.29
FN1-202ENST00000336916 LUC7L3O95232 432 aaKnown RBP13.26□□□□□ -0.29
FN1-202ENST00000336916 CPP00450 1065 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 BSPRYQ5W0U4 402 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 NLRP10Q86W26 655 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 EFCAB8A8MWE9 144 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 H7C0C1 242 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 CHEK2O96017 543 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 PHKA2P46019 1235 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 ATP5OP48047 213 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 OSBPL3Q9H4L5 887 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 GCNT4Q9P109 453 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 SFNP31947 248 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 NNMTP40261 264 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 MMP14P50281 582 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 STX1BP61266 288 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 KRT33BQ14525 404 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 DOK7Q18PE1 504 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 LRGUKQ96M69 825 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 GREM2Q9H772 168 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 ABCB4P21439 1286 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 GABPB1Q06547 395 aaPredicted RBP13.26□□□□□ -0.29
FN1-202ENST00000336916 PNOCQ13519 176 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 ERFEQ4G0M1 354 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 C4orf50Q6ZRC1 276 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 PPP1R2P1Q96PQ5 205 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 MTA3Q9BTC8 594 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 EHD2Q9NZN4 543 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 PALLDQ8WX93 1383 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 SCP2P22307 547 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 FAM186BQ8IYM0 893 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 HDAC11Q96DB2 347 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 SLC13A4Q9UKG4 626 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 TBXAS1P24557 533 aaPredicted RBP13.26□□□□□ -0.29
FN1-202ENST00000336916 MAPK4P31152 587 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 RDH13Q8NBN7 331 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 NRBF2Q96F24 287 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 ZNF658Q5TYW1 1059 aaPredicted RBP13.26□□□□□ -0.29
FN1-202ENST00000336916 MFSD14CQ5VZR4 134 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 NXNQ6DKJ4 435 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 NLRC4Q9NPP4 1024 aa13.26□□□□□ -0.29
FN1-202ENST00000336916 HERC5Q9UII4 1024 aaKnown RBP13.26□□□□□ -0.29
FN1-202ENST00000336916 MYO5BQ9ULV0 1848 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 SYMPKQ92797 1274 aaKnown RBP13.25□□□□□ -0.29
FN1-202ENST00000336916 TUBGCP2Q9BSJ2 902 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 TTLL4Q14679 1199 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 DNAJC24Q6P3W2 148 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 KCTD6Q8NC69 237 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 LRRC8CQ8TDW0 803 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 CNOT6LQ96LI5 555 aaKnown RBP13.25□□□□□ -0.29
FN1-202ENST00000336916 UBN1Q9NPG3 1134 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 TBC1D22BQ9NU19 505 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 EPN1Q9Y6I3 576 aaPredicted RBP13.25□□□□□ -0.29
FN1-202ENST00000336916 TRIM31Q9BZY9 425 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 RASSF4Q9H2L5 321 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 TRIM45Q9H8W5 580 aaPredicted RBP13.25□□□□□ -0.29
FN1-202ENST00000336916 PCDHB8Q9UN66 801 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 ERBB3P21860 1342 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 CNOT10Q9H9A5 744 aaKnown RBP13.25□□□□□ -0.29
FN1-202ENST00000336916 RWDD2AQ9UIY3 292 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 MADDQ8WXG6 1647 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 AP3B1O00203 1094 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 PRPSAP2O60256 369 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 SETSIPP0DME0 302 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 JADE1Q6IE81 842 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 PODNQ7Z5L7 613 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 TADA2BQ86TJ2 420 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 KLHDC4Q8TBB5 520 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 MRFAP1L1Q96HT8 127 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 ABCA6Q8N139 1617 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 TJP3O95049 919 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms