RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 KDRP35968 1356 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 ABCC5O15440 1437 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 ABCC12Q96J65 1359 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 ORC4O43929 436 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 TBC1D4O60343 1298 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 BRD1O95696 1058 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 SERPINB3P29508 390 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 RFWD2Q8NHY2 731 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 DIS3Q9Y2L1 958 aaKnown RBP6.64□□□□□ -1.35
CSMD1-201ENST00000335551 SPDYE2BA6NHP3 402 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 IKBKBO14920 756 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 RASSF9O75901 435 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 HSPA4LO95757 839 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 SPDYE6P0CI01 402 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 BEND6Q5SZJ8 279 aaPredicted RBP6.64□□□□□ -1.35
CSMD1-201ENST00000335551 RFX6Q8HWS3 928 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 OLA1Q9NTK5 396 aaKnown RBP6.64□□□□□ -1.35
CSMD1-201ENST00000335551 TBK1Q9UHD2 729 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 GMEB1Q9Y692 573 aa6.64□□□□□ -1.35
CSMD1-201ENST00000335551 KRT38O76015 456 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 SLC9A1P19634 815 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 COPB1P53618 953 aaKnown RBP6.63□□□□□ -1.35
CSMD1-201ENST00000335551 INPP5AQ14642 412 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 GPBP1Q86WP2 473 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 ST13P5Q8NFI4 369 aaPredicted RBP6.63□□□□□ -1.35
CSMD1-201ENST00000335551 TESK2Q96S53 571 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 PLXNC1O60486 1568 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 GOLGA8RI6L899 631 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 POTEAQ6S8J7 498 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 NLRP14Q86W24 1093 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 CATSPER3Q86XQ3 398 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 HIPK4Q8NE63 616 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 PBXIP1Q96AQ6 731 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 BIN2Q9UBW5 565 aaPredicted RBP6.63□□□□□ -1.35
CSMD1-201ENST00000335551 CLEC11AQ9Y240 323 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 ENO4A6NNW6 628 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 XPOTO43592 962 aaKnown RBP6.63□□□□□ -1.35
CSMD1-201ENST00000335551 RAPGEF3O95398 923 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 OCM2P0CE71 109 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 OCMP0CE72 109 aaPredicted RBP6.63□□□□□ -1.35
CSMD1-201ENST00000335551 CCND1P24385 295 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 PPP2R2AP63151 447 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 MAPRE2Q15555 327 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 CCDC103Q8IW40 242 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 TMEM245Q9H330 911 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 FANCAO15360 1455 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 PARD3Q8TEW0 1356 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 CYP2J2P51589 502 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 MYL7Q01449 175 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 KCNV2Q8TDN2 545 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 CCDC90BQ9GZT6 254 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 SUPT3HO75486 399 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 AARSP49588 968 aaKnown RBP eCLIP6.63□□□□□ -1.35
CSMD1-201ENST00000335551 MFAP3P55082 362 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 HDLBPQ00341 1268 aaKnown RBP6.63□□□□□ -1.35
CSMD1-201ENST00000335551 OTUD6AQ7L8S5 288 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 MYLK4Q86YV6 388 aaPredicted RBP6.63□□□□□ -1.35
CSMD1-201ENST00000335551 VPS39Q96JC1 886 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 TGS1Q96RS0 853 aaKnown RBP6.63□□□□□ -1.35
CSMD1-201ENST00000335551 NYXQ9GZU5 481 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 FANCLQ9NW38 375 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 ARL2BPQ9Y2Y0 163 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 GOLGA8TH3BQL2 631 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 HAUS5O94927 633 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 GOLGA8HP0CJ92 632 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 HSPA1AP0DMV8 641 aaKnown RBP6.63□□□□□ -1.35
CSMD1-201ENST00000335551 HSPA1BP0DMV9 641 aaKnown RBP6.63□□□□□ -1.35
CSMD1-201ENST00000335551 ABCD1P33897 745 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 TXKP42681 527 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 PICALMQ13492 652 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 TRIM71Q2Q1W2 868 aaKnown RBP6.63□□□□□ -1.35
CSMD1-201ENST00000335551 TTC6Q86TZ1 520 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 CABP7Q86V35 215 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 DHTKD1Q96HY7 919 aaPredicted RBP6.63□□□□□ -1.35
CSMD1-201ENST00000335551 FAM210AQ96ND0 272 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 TM6SF1Q9BZW5 370 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 GPBP1L1Q9HC44 474 aaPredicted RBP6.63□□□□□ -1.35
CSMD1-201ENST00000335551 ZBTB40Q9NUA8 1239 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 NSMCE4AQ9NXX6 385 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 PHF8Q9UPP1 1060 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 PIK3C2GO75747 1445 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 PIK3CAP42336 1068 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 SLCO1A2P46721 670 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 KRT40Q6A162 431 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 TAGAPQ8N103 731 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 DTX3LQ8TDB6 740 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 PGBD1Q96JS3 809 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 FAM167BQ9BTA0 163 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 PEG3Q9GZU2 1588 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 ICE1Q9Y2F5 2266 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 CACNA1FO60840 1977 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 LAD1O00515 517 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 CAPN1P07384 714 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 PAMP19021 973 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 VCAM1P19320 739 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 HSPA13P48723 471 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 EXOC3L4Q17RC7 722 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 GRAMD1AQ96CP6 724 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 PHACTR3Q96KR7 559 aa6.63□□□□□ -1.35
CSMD1-201ENST00000335551 QKIQ96PU8 341 aaKnown RBP eCLIP6.63□□□□□ -1.357e-33■■■■■ 356
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms