RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 KRT79Q5XKE5 535 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 CKAP2LQ8IYA6 745 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 PHB2Q99623 299 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 TUBGCP2Q9BSJ2 902 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 BAG3O95817 575 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 IMPDH2P12268 514 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 PIK3CBP42338 1070 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 MXI1P50539 228 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 ZMAT1Q5H9K5 638 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 UHRF1BP1Q6BDS2 1440 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 SPATA21Q7Z572 469 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 C12orf65Q9H3J6 166 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 KIAA1107Q9UPP5 1409 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 UBAP1LF5GYI3 381 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 HSPA13P48723 471 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 MED21Q13503 144 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 MUM1L1Q5H9M0 696 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 ANKRD42Q8N9B4 389 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 OR5T1Q8NG75 326 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 C18orf25Q96B23 403 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 THAP11Q96EK4 314 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 VIPAS39Q9H9C1 493 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 FAM169AQ9Y6X4 670 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 RAB3GAP2Q9H2M9 1393 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 hCG_1642624A0A1W2PR95 340 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 H3BRJ5 948 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 TMCC2O75069 709 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 ZBED1O96006 694 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 GTF2E1P29083 439 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 OAS2P29728 719 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 RAB25P57735 213 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 ERMARDQ5T6L9 678 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 TRIM59Q8IWR1 403 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 KIF21AQ7Z4S6 1674 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 MYO1CO00159 1063 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 ENC1O14682 589 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 LZTS3O60299 673 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 TRIM13O60858 407 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 TOMM70O94826 608 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 SLC44A2Q8IWA5 706 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 KLHL7Q8IXQ5 586 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 KIRREL3Q8IZU9 778 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 ICA1LQ8NDH6 482 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 NCLNQ969V3 563 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 TMEM5Q9Y2B1 443 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 MSH6P52701 1360 aa6.52□□□□□ -1.36
CDC42BPA-201ENST00000334218 KRT87PA6NCN2 255 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 BUB1O43683 1085 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 SLC4A2P04920 1241 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 RALGDSQ12967 914 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 VEPH1Q14D04 833 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 FERMT3Q86UX7 667 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 CCDC71Q8IV32 467 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 WARS2Q9UGM6 360 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 POLIQ9UNA4 740 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 UFL1O94874 794 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 PRPF6O94906 941 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 IFIT5Q13325 482 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 UGP2Q16851 508 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 KHDRBS2Q5VWX1 349 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 MYCBPAPQ8TBZ2 947 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 WASF1Q92558 559 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 CEP95Q96GE4 821 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 FAM161BQ96MY7 647 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 YME1L1Q96TA2 773 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 KLC2Q9H0B6 622 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 PLCL2Q9UPR0 1127 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 CHD4Q14839 1912 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 TPPPO94811 219 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 MTTPP55157 894 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 ARHGEF6Q15052 776 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 C9orf131Q5VYM1 1079 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 SULT1C3Q6IMI6 304 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 FAM178BQ8IXR5 827 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 BTN2A2Q8WVV5 523 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 APOL6Q9BWW8 343 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 TEX13AQ9BXU3 409 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZCWPW1Q9H0M4 648 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 PLEKHA5Q9HAU0 1116 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 MAP3K13O43283 966 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 MFN2O95140 757 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 CALB1P05937 261 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 PAX7P23759 505 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 TGFBR2P37173 567 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 PUS10Q3MIT2 529 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 TAB3Q8N5C8 712 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 STKLD1Q8NE28 680 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 HIPK4Q8NE63 616 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 JDP2Q8WYK2 163 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 RPS6KC1Q96S38 1066 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 MYL10Q9BUA6 226 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 FAM96AQ9H5X1 160 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 HAUS2Q9NVX0 235 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 EURLQ9NYK6 297 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 SRP68Q9UHB9 627 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 LRRIQ4A6NIV6 560 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 RIMBP2O15034 1052 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 SLC3A2P08195 630 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 PUM3Q15397 648 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms