RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 CAPRIN2Q6IMN6 1127 aaKnown RBP19.94■□□□□ 0.78
PKP3-201ENST00000331563 RASSF7Q02833 373 aa19.94■□□□□ 0.78
PKP3-201ENST00000331563 CNBD1Q8NA66 436 aa19.94■□□□□ 0.78
PKP3-201ENST00000331563 NOX5Q96PH1 765 aa19.94■□□□□ 0.78
PKP3-201ENST00000331563 TLR10Q9BXR5 811 aa19.94■□□□□ 0.78
PKP3-201ENST00000331563 TMBIM4Q9HC24 238 aa19.94■□□□□ 0.78
PKP3-201ENST00000331563 ATRNO75882 1429 aa19.93■□□□□ 0.78
PKP3-201ENST00000331563 TRAPPC3O43617 180 aa19.93■□□□□ 0.78
PKP3-201ENST00000331563 ATP2C1P98194 919 aaPredicted RBP19.93■□□□□ 0.78
PKP3-201ENST00000331563 PNMA8AQ86V59 439 aaPredicted RBP19.93■□□□□ 0.78
PKP3-201ENST00000331563 KLHL7Q8IXQ5 586 aa19.93■□□□□ 0.78
PKP3-201ENST00000331563 CNOT6LQ96LI5 555 aaKnown RBP19.93■□□□□ 0.78
PKP3-201ENST00000331563 NOD2Q9HC29 1040 aa19.93■□□□□ 0.78
PKP3-201ENST00000331563 ARHGAP20Q9P2F6 1191 aa19.93■□□□□ 0.78
PKP3-201ENST00000331563 ZNF804BA4D1E1 1349 aa19.93■□□□□ 0.78
PKP3-201ENST00000331563 NHSQ6T4R5 1651 aa19.93■□□□□ 0.78
PKP3-201ENST00000331563 TBC1D25Q3MII6 688 aa19.93■□□□□ 0.78
PKP3-201ENST00000331563 PIK3AP1Q6ZUJ8 805 aa19.93■□□□□ 0.78
PKP3-201ENST00000331563 MREGQ8N565 214 aa19.93■□□□□ 0.78
PKP3-201ENST00000331563 TCP11Q8WWU5 503 aa19.93■□□□□ 0.78
PKP3-201ENST00000331563 SHISA4Q96DD7 197 aa19.93■□□□□ 0.78
PKP3-201ENST00000331563 RNF26Q9BY78 433 aaPredicted RBP19.93■□□□□ 0.78
PKP3-201ENST00000331563 PHF20L1A8MW92 1017 aa19.92■□□□□ 0.78
PKP3-201ENST00000331563 TULP1O00294 542 aaPredicted RBP19.92■□□□□ 0.78
PKP3-201ENST00000331563 CLTAP09496 248 aa19.92■□□□□ 0.78
PKP3-201ENST00000331563 CTNNA1P35221 906 aaKnown RBP19.92■□□□□ 0.78
PKP3-201ENST00000331563 TMTC2Q8N394 836 aa19.92■□□□□ 0.78
PKP3-201ENST00000331563 ZNF513Q8N8E2 541 aaPredicted RBP19.92■□□□□ 0.78
PKP3-201ENST00000331563 DRAXINQ8NBI3 349 aaPredicted RBP19.92■□□□□ 0.78
PKP3-201ENST00000331563 NSMCE1Q8WV22 266 aa19.92■□□□□ 0.78
PKP3-201ENST00000331563 PHF20Q9BVI0 1012 aa19.92■□□□□ 0.78
PKP3-201ENST00000331563 MMRN2Q9H8L6 949 aa19.92■□□□□ 0.78
PKP3-201ENST00000331563 SLC39A2Q9NP94 309 aa19.92■□□□□ 0.78
PKP3-201ENST00000331563 SRRM3A6NNA2 597 aaPredicted RBP19.92■□□□□ 0.78
PKP3-201ENST00000331563 ATP6V1G2O95670 118 aa19.92■□□□□ 0.78
PKP3-201ENST00000331563 STAMBPL1Q96FJ0 436 aa19.92■□□□□ 0.78
PKP3-201ENST00000331563 SALL4Q9UJQ4 1053 aa19.92■□□□□ 0.78
PKP3-201ENST00000331563 HIBADHP31937 336 aaKnown RBP19.91■□□□□ 0.78
PKP3-201ENST00000331563 PDE6BP35913 854 aa19.91■□□□□ 0.78
PKP3-201ENST00000331563 XRCC4Q13426 336 aa19.91■□□□□ 0.78
PKP3-201ENST00000331563 CDC37Q16543 378 aaPredicted RBP19.91■□□□□ 0.78
PKP3-201ENST00000331563 BZW1Q7L1Q6 419 aaKnown RBP19.91■□□□□ 0.78
PKP3-201ENST00000331563 KRT27Q7Z3Y8 459 aa19.91■□□□□ 0.78
PKP3-201ENST00000331563 MAGEB6P1A0A0J9YX57 407 aa19.91■□□□□ 0.78
PKP3-201ENST00000331563 GYS1P13807 737 aa19.91■□□□□ 0.78
PKP3-201ENST00000331563 PRR5LQ6MZQ0 368 aa19.91■□□□□ 0.78
PKP3-201ENST00000331563 PROM2Q8N271 834 aa19.91■□□□□ 0.78
PKP3-201ENST00000331563 KLHL23Q8NBE8 558 aa19.91■□□□□ 0.78
PKP3-201ENST00000331563 C3orf20Q8ND61 904 aa19.91■□□□□ 0.78
PKP3-201ENST00000331563 CUL5Q93034 780 aa19.91■□□□□ 0.78
PKP3-201ENST00000331563 CASZ1Q86V15 1759 aa19.91■□□□□ 0.78
PKP3-201ENST00000331563 THEMIS2Q5TEJ8 643 aa19.9■□□□□ 0.78
PKP3-201ENST00000331563 RRAGAQ7L523 313 aa19.9■□□□□ 0.78
PKP3-201ENST00000331563 RAPGEF5Q92565 580 aa19.9■□□□□ 0.78
PKP3-201ENST00000331563 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.9■□□□□ 0.785e-7■■■■□ 23.7
PKP3-201ENST00000331563 TAF1LQ8IZX4 1826 aa19.9■□□□□ 0.78
PKP3-201ENST00000331563 MGRN1O60291 552 aa19.9■□□□□ 0.78
PKP3-201ENST00000331563 FTCDO95954 541 aa19.9■□□□□ 0.78
PKP3-201ENST00000331563 ELF3P78545 371 aaPredicted RBP19.9■□□□□ 0.78
PKP3-201ENST00000331563 CDK17Q00537 523 aa19.9■□□□□ 0.78
PKP3-201ENST00000331563 UBLCP1Q8WVY7 318 aaPredicted RBP19.9■□□□□ 0.78
PKP3-201ENST00000331563 MTMR8Q96EF0 704 aa19.9■□□□□ 0.78
PKP3-201ENST00000331563 NOVA2Q9UNW9 492 aaKnown RBP19.9■□□□□ 0.78
PKP3-201ENST00000331563 PLAGL2Q9UPG8 496 aa19.9■□□□□ 0.78
PKP3-201ENST00000331563 MYH13Q9UKX3 1938 aa19.9■□□□□ 0.78
PKP3-201ENST00000331563 LAMB2P55268 1798 aa19.9■□□□□ 0.78
PKP3-201ENST00000331563 HSD17B3P37058 310 aa19.89■□□□□ 0.78
PKP3-201ENST00000331563 GFPT1Q06210 699 aaPredicted RBP19.89■□□□□ 0.78
PKP3-201ENST00000331563 TDRD12Q587J7 1177 aaKnown RBP19.89■□□□□ 0.78
PKP3-201ENST00000331563 KLHDC7AQ5VTJ3 777 aa19.89■□□□□ 0.78
PKP3-201ENST00000331563 TTI2Q6NXR4 508 aa19.89■□□□□ 0.78
PKP3-201ENST00000331563 MIS18BP1Q6P0N0 1132 aa19.89■□□□□ 0.78
PKP3-201ENST00000331563 RUFY4Q6ZNE9 571 aa19.89■□□□□ 0.78
PKP3-201ENST00000331563 TMC4Q7Z404 712 aa19.89■□□□□ 0.78
PKP3-201ENST00000331563 FBXO33Q7Z6M2 555 aa19.89■□□□□ 0.78
PKP3-201ENST00000331563 FAM114A1Q8IWE2 563 aa19.89■□□□□ 0.78
PKP3-201ENST00000331563 RPUSD2Q8IZ73 545 aaKnown RBP19.89■□□□□ 0.78
PKP3-201ENST00000331563 TRPC6Q9Y210 931 aa19.89■□□□□ 0.78
PKP3-201ENST00000331563 CICQ96RK0 1608 aaPredicted RBP19.89■□□□□ 0.78
PKP3-201ENST00000331563 PPP2R2AP63151 447 aa19.89■□□□□ 0.77
PKP3-201ENST00000331563 MECOMQ03112 1051 aa19.89■□□□□ 0.77
PKP3-201ENST00000331563 PKN1Q16512 942 aa19.89■□□□□ 0.77
PKP3-201ENST00000331563 IL17AQ16552 155 aa19.89■□□□□ 0.77
PKP3-201ENST00000331563 CCDC155Q8N6L0 562 aa19.89■□□□□ 0.77
PKP3-201ENST00000331563 SPAG5Q96R06 1193 aa19.89■□□□□ 0.77
PKP3-201ENST00000331563 TSKSQ9UJT2 592 aa19.89■□□□□ 0.77
PKP3-201ENST00000331563 ARMC3Q5W041 872 aa19.89■□□□□ 0.77
PKP3-201ENST00000331563 C1orf131Q8NDD1 294 aaKnown RBP19.89■□□□□ 0.77
PKP3-201ENST00000331563 NACAP1Q9BZK3 213 aa19.89■□□□□ 0.77
PKP3-201ENST00000331563 RNF14Q9UBS8 474 aa19.89■□□□□ 0.77
PKP3-201ENST00000331563 ARAP2Q8WZ64 1704 aa19.89■□□□□ 0.77
PKP3-201ENST00000331563 SCN7AQ01118 1682 aa19.88■□□□□ 0.77
PKP3-201ENST00000331563 RAD51CO43502 376 aa19.88■□□□□ 0.77
PKP3-201ENST00000331563 COQ9O75208 318 aa19.88■□□□□ 0.77
PKP3-201ENST00000331563 GRIK5Q16478 980 aa19.88■□□□□ 0.77
PKP3-201ENST00000331563 CCDC47Q96A33 483 aaKnown RBP19.88■□□□□ 0.77
PKP3-201ENST00000331563 EBF2Q9HAK2 575 aa19.88■□□□□ 0.77
PKP3-201ENST00000331563 PLCB1Q9NQ66 1216 aa19.88■□□□□ 0.77
PKP3-201ENST00000331563 SLC12A6Q9UHW9 1150 aa19.88■□□□□ 0.77
PKP3-201ENST00000331563 PACSIN2Q9UNF0 486 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms