RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 ARSHQ5FYA8 562 aa11.11□□□□□ -0.63
RARB-201ENST00000330688 HERC4Q5GLZ8 1057 aaPredicted RBP11.11□□□□□ -0.63
RARB-201ENST00000330688 CACNA2D4Q7Z3S7 1137 aa11.11□□□□□ -0.63
RARB-201ENST00000330688 GPBP1Q86WP2 473 aa11.11□□□□□ -0.63
RARB-201ENST00000330688 SCFD1Q8WVM8 642 aa11.11□□□□□ -0.63
RARB-201ENST00000330688 MKL1Q969V6 931 aa11.11□□□□□ -0.63
RARB-201ENST00000330688 EDEM3Q9BZQ6 932 aa11.11□□□□□ -0.63
RARB-201ENST00000330688 DBNDD1Q9H9R9 158 aa11.11□□□□□ -0.63
RARB-201ENST00000330688 KDM3AQ9Y4C1 1321 aa11.11□□□□□ -0.63
RARB-201ENST00000330688 CYP3A7-CYP3A51PA0A087WV96 503 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 NPR1P16066 1061 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 CYP3A7P24462 503 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 SNAP25P60880 206 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 CDC37Q16543 378 aaPredicted RBP11.1□□□□□ -0.63
RARB-201ENST00000330688 TAF3Q5VWG9 929 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 SLFN13Q68D06 897 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 SH3BP5LQ7L8J4 393 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 CCDC65Q8IXS2 484 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 TXLNBQ8N3L3 684 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 CRACR2AQ9BSW2 395 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 KCTD10Q9H3F6 313 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 MYH7BA7E2Y1 1941 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 ADAMTSL1Q8N6G6 1762 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 G3V3G9 751 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 PHACTR2O75167 634 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 MAPK8IP2Q13387 824 aaPredicted RBP11.1□□□□□ -0.63
RARB-201ENST00000330688 CERKLQ49MI3 558 aaPredicted RBP11.1□□□□□ -0.63
RARB-201ENST00000330688 FAM83BQ5T0W9 1011 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 DCAF8Q5TAQ9 597 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 KIAA0825Q8IV33 1275 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 TRIM59Q8IWR1 403 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 CEP63Q96MT8 703 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 ZDHHC15Q96MV8 337 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 GDAP1L1Q96MZ0 367 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 MBOAT7Q96N66 472 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 HINFPQ9BQA5 517 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 PSD3Q9NYI0 1048 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 NYAP2Q9P242 653 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 FAM198AQ9UFP1 575 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 SSU72P8A0A1W2PR75 194 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 POTEFA5A3E0 1075 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 PJA2O43164 708 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 POTEIP0CG38 1075 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 LMAN1P49257 510 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 RASSF7Q02833 373 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 NFRKBQ6P4R8 1299 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 POTEGQ6S5H5 508 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 POTEEQ6S8J3 1075 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 CCNI2Q6ZMN8 369 aaPredicted RBP11.1□□□□□ -0.63
RARB-201ENST00000330688 GSPT2Q8IYD1 628 aaKnown RBP11.1□□□□□ -0.63
RARB-201ENST00000330688 CRYGNQ8WXF5 182 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 PSMB7Q99436 277 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 NAP1L4Q99733 375 aaKnown RBP11.1□□□□□ -0.63
RARB-201ENST00000330688 EMILIN3Q9NT22 766 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 CALCOCO1Q9P1Z2 691 aa11.1□□□□□ -0.63
RARB-201ENST00000330688 TRPC5Q9UL62 973 aaPredicted RBP11.1□□□□□ -0.63
RARB-201ENST00000330688 PRLRP16471 622 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 MCM3P25205 808 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 CXCR5P32302 372 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 SLC12A3P55017 1021 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 POLR2FP61218 127 aaKnown RBP11.09□□□□□ -0.63
RARB-201ENST00000330688 PSMC6P62333 389 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 SPIRE1Q08AE8 756 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 EZH2Q15910 746 aaKnown RBP11.09□□□□□ -0.63
RARB-201ENST00000330688 DCAF4Q8WV16 495 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 OSBPL9Q96SU4 736 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 LSM14BQ9BX40 385 aaKnown RBP11.09□□□□□ -0.63
RARB-201ENST00000330688 GLT8D2Q9H1C3 349 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 SMARCAL1Q9NZC9 954 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 CEP72Q9P209 647 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 QSER1Q2KHR3 1735 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 GREB1LQ9C091 1923 aaPredicted RBP11.09□□□□□ -0.63
RARB-201ENST00000330688 ZC3H4Q9UPT8 1303 aaKnown RBP11.09□□□□□ -0.63
RARB-201ENST00000330688 FRMD3A2A2Y4 597 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 NCK2O43639 380 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 MARSP56192 900 aaKnown RBP11.09□□□□□ -0.63
RARB-201ENST00000330688 ARHGAP4P98171 946 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 TDRD12Q587J7 1177 aaKnown RBP11.09□□□□□ -0.63
RARB-201ENST00000330688 CATSPER3Q86XQ3 398 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 MMGT1Q8N4V1 131 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 ETNPPLQ8TBG4 499 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 HDAC7Q8WUI4 952 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 DHX36Q9H2U1 1008 aaKnown RBP11.09□□□□□ -0.63
RARB-201ENST00000330688 VIPAS39Q9H9C1 493 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 EHD2Q9NZN4 543 aa11.09□□□□□ -0.63
RARB-201ENST00000330688 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.09□□□□□ -0.63
RARB-201ENST00000330688 RBAK-RBAKDNI3L0D1 243 aa11.08□□□□□ -0.64
RARB-201ENST00000330688 BUB1O43683 1085 aa11.08□□□□□ -0.64
RARB-201ENST00000330688 SYF2O95926 243 aaKnown RBP11.08□□□□□ -0.64
RARB-201ENST00000330688 TAL1P17542 331 aaPredicted RBP11.08□□□□□ -0.64
RARB-201ENST00000330688 ALDH1B1P30837 517 aa11.08□□□□□ -0.64
RARB-201ENST00000330688 TNNT3P45378 269 aaPredicted RBP11.08□□□□□ -0.64
RARB-201ENST00000330688 CASP5P51878 434 aa11.08□□□□□ -0.64
RARB-201ENST00000330688 ADAM9Q13443 819 aa11.08□□□□□ -0.64
RARB-201ENST00000330688 PRR16Q569H4 304 aa11.08□□□□□ -0.64
RARB-201ENST00000330688 ZNF572Q7Z3I7 529 aaPredicted RBP11.08□□□□□ -0.64
RARB-201ENST00000330688 SPATA4Q8NEY3 305 aa11.08□□□□□ -0.64
RARB-201ENST00000330688 FAM71BQ8TC56 605 aa11.08□□□□□ -0.64
RARB-201ENST00000330688 TLR10Q9BXR5 811 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms