RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 BICDL2A1A5D9 508 aa18.9■□□□□ 0.62
DDX41-201ENST00000330503 FDX1P10109 184 aa18.9■□□□□ 0.62
DDX41-201ENST00000330503 DNTTIP2Q5QJE6 756 aaKnown RBP18.9■□□□□ 0.62
DDX41-201ENST00000330503 CSGALNACT2Q8N6G5 542 aa18.9■□□□□ 0.62
DDX41-201ENST00000330503 DNM3Q9UQ16 869 aa18.9■□□□□ 0.62
DDX41-201ENST00000330503 PCDHA2Q9Y5H9 948 aa18.9■□□□□ 0.62
DDX41-201ENST00000330503 ITGB5P18084 799 aa18.89■□□□□ 0.62
DDX41-201ENST00000330503 EEF1GP26641 437 aaKnown RBP18.89■□□□□ 0.62
DDX41-201ENST00000330503 DSG3P32926 999 aa18.89■□□□□ 0.62
DDX41-201ENST00000330503 ADKP55263 362 aaKnown RBP18.89■□□□□ 0.62
DDX41-201ENST00000330503 LRRC41Q15345 812 aa18.89■□□□□ 0.62
DDX41-201ENST00000330503 CEP135Q66GS9 1140 aa18.89■□□□□ 0.62
DDX41-201ENST00000330503 CREBRFQ8IUR6 639 aa18.89■□□□□ 0.62
DDX41-201ENST00000330503 CCAR2Q8N163 923 aaKnown RBP18.89■□□□□ 0.62
DDX41-201ENST00000330503 SYT2Q8N9I0 419 aaPredicted RBP18.89■□□□□ 0.62
DDX41-201ENST00000330503 TRERF1Q96PN7 1200 aa18.89■□□□□ 0.62
DDX41-201ENST00000330503 TAAR1Q96RJ0 339 aa18.89■□□□□ 0.62
DDX41-201ENST00000330503 RIPK3Q9Y572 518 aa18.89■□□□□ 0.62
DDX41-201ENST00000330503 SLITRK3O94933 977 aa18.89■□□□□ 0.61
DDX41-201ENST00000330503 HOXA7P31268 230 aaPredicted RBP18.89■□□□□ 0.61
DDX41-201ENST00000330503 CYP4A11Q02928 519 aa18.89■□□□□ 0.61
DDX41-201ENST00000330503 C9orf131Q5VYM1 1079 aa18.89■□□□□ 0.61
DDX41-201ENST00000330503 E4F1Q66K89 784 aaPredicted RBP18.89■□□□□ 0.61
DDX41-201ENST00000330503 B3GNT9Q6UX72 402 aa18.89■□□□□ 0.61
DDX41-201ENST00000330503 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.89■□□□□ 0.61
DDX41-201ENST00000330503 SAMD3Q8N6K7 520 aa18.89■□□□□ 0.61
DDX41-201ENST00000330503 ANKRD20A12PQ8NF67 263 aa18.89■□□□□ 0.61
DDX41-201ENST00000330503 MAP3K20Q9NYL2 800 aaKnown RBP18.89■□□□□ 0.61
DDX41-201ENST00000330503 RABGAP1Q9Y3P9 1069 aa18.89■□□□□ 0.61
DDX41-201ENST00000330503 CTDP1Q9Y5B0 961 aaPredicted RBP18.89■□□□□ 0.61
DDX41-201ENST00000330503 FRMD3A2A2Y4 597 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 KCNJ6P48051 423 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 RPS6P62753 249 aaKnown RBP18.88■□□□□ 0.61
DDX41-201ENST00000330503 CACNB1Q02641 598 aaPredicted RBP18.88■□□□□ 0.61
DDX41-201ENST00000330503 RBL2Q08999 1139 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 PABPC4Q13310 644 aaKnown RBP eCLIP18.88■□□□□ 0.61
DDX41-201ENST00000330503 CATSPERGQ6ZRH7 1159 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 CCDC112Q8NEF3 446 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 EEF2KMTQ96G04 330 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 ZNF577Q9BSK1 485 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 FGFBP2Q9BYJ0 223 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 FRMPD4Q14CM0 1322 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 ADM5C9JUS6 153 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 GAS7O60861 476 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 MRPS9P82933 396 aaKnown RBP18.88■□□□□ 0.61
DDX41-201ENST00000330503 SETQ01105 290 aaPredicted RBP18.88■□□□□ 0.61
DDX41-201ENST00000330503 GIT2Q14161 759 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 COG2Q14746 738 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 ZNF507Q8TCN5 953 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 DYDC2Q96IM9 177 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 UNC45AQ9H3U1 944 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 TRMT1Q9NXH9 659 aaKnown RBP18.88■□□□□ 0.61
DDX41-201ENST00000330503 PNMA2Q9UL42 364 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 UBIAD1Q9Y5Z9 338 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 SNCAIPQ9Y6H5 919 aa18.88■□□□□ 0.61
DDX41-201ENST00000330503 BCRP11274 1271 aa18.87■□□□□ 0.61
DDX41-201ENST00000330503 MAP3K9P80192 1104 aa18.87■□□□□ 0.61
DDX41-201ENST00000330503 RAD51AP2Q09MP3 1159 aa18.87■□□□□ 0.61
DDX41-201ENST00000330503 CTTNQ14247 550 aaKnown RBP18.87■□□□□ 0.61
DDX41-201ENST00000330503 FAM26FQ5R3K3 315 aa18.87■□□□□ 0.61
DDX41-201ENST00000330503 NIPA1Q7RTP0 329 aa18.87■□□□□ 0.61
DDX41-201ENST00000330503 CCDC65Q8IXS2 484 aa18.87■□□□□ 0.61
DDX41-201ENST00000330503 TUFT1Q9NNX1 390 aa18.87■□□□□ 0.61
DDX41-201ENST00000330503 ITIH6Q6UXX5 1313 aa18.87■□□□□ 0.61
DDX41-201ENST00000330503 IPO5O00410 1097 aaKnown RBP18.86■□□□□ 0.61
DDX41-201ENST00000330503 CHMP2AO43633 222 aa18.86■□□□□ 0.61
DDX41-201ENST00000330503 EYA4O95677 639 aa18.86■□□□□ 0.61
DDX41-201ENST00000330503 PCNX4Q63HM2 1172 aa18.86■□□□□ 0.61
DDX41-201ENST00000330503 DCPSQ96C86 337 aaKnown RBP18.86■□□□□ 0.61
DDX41-201ENST00000330503 WDR11Q9BZH6 1224 aa18.86■□□□□ 0.61
DDX41-201ENST00000330503 TBC1D7Q9P0N9 293 aa18.86■□□□□ 0.61
DDX41-201ENST00000330503 RBBP6Q7Z6E9 1792 aaKnown RBP18.86■□□□□ 0.61
DDX41-201ENST00000330503 AKR1B15C9JRZ8 316 aaPredicted RBP18.86■□□□□ 0.61
DDX41-201ENST00000330503 NKRFO15226 690 aaKnown RBP eCLIP18.86■□□□□ 0.61
DDX41-201ENST00000330503 VGLL4Q14135 290 aa18.86■□□□□ 0.61
DDX41-201ENST00000330503 TKFCQ3LXA3 575 aa18.86■□□□□ 0.61
DDX41-201ENST00000330503 SH3D19Q5HYK7 790 aa18.86■□□□□ 0.61
DDX41-201ENST00000330503 MYOCDQ8IZQ8 938 aa18.86■□□□□ 0.61
DDX41-201ENST00000330503 KCTD17Q8N5Z5 321 aa18.86■□□□□ 0.61
DDX41-201ENST00000330503 PURBQ96QR8 312 aaKnown RBP18.86■□□□□ 0.61
DDX41-201ENST00000330503 RIT2Q99578 217 aa18.86■□□□□ 0.61
DDX41-201ENST00000330503 KCNH7Q9NS40 1196 aa18.86■□□□□ 0.61
DDX41-201ENST00000330503 MAGEC2Q9UBF1 373 aaPredicted RBP18.86■□□□□ 0.61
DDX41-201ENST00000330503 COL11A1P12107 1806 aaPredicted RBP18.85■□□□□ 0.61
DDX41-201ENST00000330503 LGALS16A8MUM7 142 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 DHX15O43143 795 aaKnown RBP18.85■□□□□ 0.61
DDX41-201ENST00000330503 UBXN1Q04323 297 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 TMEM132BQ14DG7 1078 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 EPHA7Q15375 998 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 HERC4Q5GLZ8 1057 aaPredicted RBP18.85■□□□□ 0.61
DDX41-201ENST00000330503 RNF207Q6ZRF8 634 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 KRT26Q7Z3Y9 468 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 PPFIBP1Q86W92 1011 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 TPH2Q8IWU9 490 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 MB21D1Q8N884 522 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 CPLX3Q8WVH0 158 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 CNOT6LQ96LI5 555 aaKnown RBP18.85■□□□□ 0.61
DDX41-201ENST00000330503 C16orf45Q96MC5 204 aaPredicted RBP18.85■□□□□ 0.61
DDX41-201ENST00000330503 TEKT3Q9BXF9 490 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 BHMT2Q9H2M3 363 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms