RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ARP10275 920 aa16.64■□□□□ 0.25
TPM3-205ENST00000328159 DSG3P32926 999 aa16.64■□□□□ 0.25
TPM3-205ENST00000328159 KCNJ6P48051 423 aa16.64■□□□□ 0.25
TPM3-205ENST00000328159 PSMC6P62333 389 aa16.64■□□□□ 0.25
TPM3-205ENST00000328159 C9orf131Q5VYM1 1079 aa16.64■□□□□ 0.25
TPM3-205ENST00000328159 CENPPQ6IPU0 288 aa16.64■□□□□ 0.25
TPM3-205ENST00000328159 KRT26Q7Z3Y9 468 aa16.64■□□□□ 0.25
TPM3-205ENST00000328159 CREBRFQ8IUR6 639 aa16.64■□□□□ 0.25
TPM3-205ENST00000328159 KCTD17Q8N5Z5 321 aa16.64■□□□□ 0.25
TPM3-205ENST00000328159 DCPSQ96C86 337 aaKnown RBP16.64■□□□□ 0.25
TPM3-205ENST00000328159 WNK4Q96J92 1243 aa16.64■□□□□ 0.25
TPM3-205ENST00000328159 TRERF1Q96PN7 1200 aa16.64■□□□□ 0.25
TPM3-205ENST00000328159 ZNF577Q9BSK1 485 aa16.64■□□□□ 0.25
TPM3-205ENST00000328159 SEMA6BQ9H3T3 888 aa16.64■□□□□ 0.25
TPM3-205ENST00000328159 KCND1Q9NSA2 647 aa16.64■□□□□ 0.25
TPM3-205ENST00000328159 TMOD4Q9NZQ9 345 aa16.64■□□□□ 0.25
TPM3-205ENST00000328159 R3HCC1Q9Y3T6 440 aaKnown RBP16.64■□□□□ 0.25
TPM3-205ENST00000328159 FRMPD4Q14CM0 1322 aa16.63■□□□□ 0.25
TPM3-205ENST00000328159 ITIH6Q6UXX5 1313 aa16.63■□□□□ 0.25
TPM3-205ENST00000328159 NPHP3-ACAD11A0A0J9YXS1 232 aa16.63■□□□□ 0.25
TPM3-205ENST00000328159 KRT18P05783 430 aaKnown RBP16.63■□□□□ 0.25
TPM3-205ENST00000328159 CYP4A11Q02928 519 aa16.63■□□□□ 0.25
TPM3-205ENST00000328159 FAM26FQ5R3K3 315 aa16.63■□□□□ 0.25
TPM3-205ENST00000328159 SLC30A10Q6XR72 485 aa16.63■□□□□ 0.25
TPM3-205ENST00000328159 NIPA1Q7RTP0 329 aa16.63■□□□□ 0.25
TPM3-205ENST00000328159 FAM114A1Q8IWE2 563 aa16.63■□□□□ 0.25
TPM3-205ENST00000328159 SYT2Q8N9I0 419 aaPredicted RBP16.63■□□□□ 0.25
TPM3-205ENST00000328159 TC2NQ8N9U0 490 aa16.63■□□□□ 0.25
TPM3-205ENST00000328159 REPS2Q8NFH8 660 aa16.63■□□□□ 0.25
TPM3-205ENST00000328159 IL31RAQ8NI17 732 aa16.63■□□□□ 0.25
TPM3-205ENST00000328159 WDR11Q9BZH6 1224 aa16.63■□□□□ 0.25
TPM3-205ENST00000328159 TUFT1Q9NNX1 390 aa16.63■□□□□ 0.25
TPM3-205ENST00000328159 AFG3L2Q9Y4W6 797 aa16.63■□□□□ 0.25
TPM3-205ENST00000328159 BCRP11274 1271 aa16.62■□□□□ 0.25
TPM3-205ENST00000328159 ITGB5P18084 799 aa16.62■□□□□ 0.25
TPM3-205ENST00000328159 RPS6P62753 249 aaKnown RBP16.62■□□□□ 0.25
TPM3-205ENST00000328159 MAP3K9P80192 1104 aa16.62■□□□□ 0.25
TPM3-205ENST00000328159 PABPC4Q13310 644 aaKnown RBP eCLIP16.62■□□□□ 0.252e-26■■■□□ 15.7
TPM3-205ENST00000328159 COG2Q14746 738 aa16.62■□□□□ 0.25
TPM3-205ENST00000328159 ARSHQ5FYA8 562 aa16.62■□□□□ 0.25
TPM3-205ENST00000328159 PCNX4Q63HM2 1172 aa16.62■□□□□ 0.25
TPM3-205ENST00000328159 CATSPERGQ6ZRH7 1159 aa16.62■□□□□ 0.25
TPM3-205ENST00000328159 SULF1Q8IWU6 871 aa16.62■□□□□ 0.25
TPM3-205ENST00000328159 CCAR2Q8N163 923 aaKnown RBP16.62■□□□□ 0.25
TPM3-205ENST00000328159 HSD17B14Q9BPX1 270 aa16.62■□□□□ 0.25
TPM3-205ENST00000328159 TEKT3Q9BXF9 490 aa16.62■□□□□ 0.25
TPM3-205ENST00000328159 RGL1Q9NZL6 768 aa16.62■□□□□ 0.25
TPM3-205ENST00000328159 ADAMTS5Q9UNA0 930 aa16.62■□□□□ 0.25
TPM3-205ENST00000328159 SNCAIPQ9Y6H5 919 aa16.62■□□□□ 0.25
TPM3-205ENST00000328159 OTOFQ9HC10 1997 aa16.62■□□□□ 0.25
TPM3-205ENST00000328159 PAPPA2Q9BXP8 1791 aa16.62■□□□□ 0.25
TPM3-205ENST00000328159 USP27XA6NNY8 438 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 ADM5C9JUS6 153 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 CHMP2AO43633 222 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 EYA4O95677 639 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 OAZ1P54368 228 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 ADKP55263 362 aaKnown RBP16.61■□□□□ 0.25
TPM3-205ENST00000328159 LRRC41Q15345 812 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 DLK2Q6UY11 383 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 RNF207Q6ZRF8 634 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.61■□□□□ 0.25
TPM3-205ENST00000328159 PPFIBP1Q86W92 1011 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 MYOCDQ8IZQ8 938 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 TAAR1Q96RJ0 339 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 RIT2Q99578 217 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 UNC45AQ9H3U1 944 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 RNF146Q9NTX7 359 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 UBIAD1Q9Y5Z9 338 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 FRMD3A2A2Y4 597 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 AKR1B15C9JRZ8 316 aaPredicted RBP16.61■□□□□ 0.25
TPM3-205ENST00000328159 IPO5O00410 1097 aaKnown RBP16.61■□□□□ 0.25
TPM3-205ENST00000328159 SLITRK3O94933 977 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
TPM3-205ENST00000328159 RBL2Q08999 1139 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 VGLL4Q14135 290 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 SH3D19Q5HYK7 790 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 TMEM139Q8IV31 216 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 GLIS3Q8NEA6 775 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 DYDC2Q96IM9 177 aa16.61■□□□□ 0.25
TPM3-205ENST00000328159 CNOT6LQ96LI5 555 aaKnown RBP16.61■□□□□ 0.25
TPM3-205ENST00000328159 LGALS16A8MUM7 142 aa16.6■□□□□ 0.25
TPM3-205ENST00000328159 MUTP22033 750 aa16.6■□□□□ 0.25
TPM3-205ENST00000328159 UBXN1Q04323 297 aa16.6■□□□□ 0.25
TPM3-205ENST00000328159 LRRC63Q05C16 580 aa16.6■□□□□ 0.25
TPM3-205ENST00000328159 GIT2Q14161 759 aa16.6■□□□□ 0.25
TPM3-205ENST00000328159 CTTNQ14247 550 aaKnown RBP16.6■□□□□ 0.25
TPM3-205ENST00000328159 EPHA7Q15375 998 aa16.6■□□□□ 0.25
TPM3-205ENST00000328159 TKFCQ3LXA3 575 aa16.6■□□□□ 0.25
TPM3-205ENST00000328159 HERC4Q5GLZ8 1057 aaPredicted RBP16.6■□□□□ 0.25
TPM3-205ENST00000328159 E4F1Q66K89 784 aaPredicted RBP16.6■□□□□ 0.25
TPM3-205ENST00000328159 SNRNP48Q6IEG0 339 aaKnown RBP16.6■□□□□ 0.25
TPM3-205ENST00000328159 FOXR2Q6PJQ5 311 aa16.6■□□□□ 0.25
TPM3-205ENST00000328159 B3GNT9Q6UX72 402 aa16.6■□□□□ 0.25
TPM3-205ENST00000328159 NSMFQ6X4W1 530 aa16.6■□□□□ 0.25
TPM3-205ENST00000328159 RBM46Q8TBY0 533 aaKnown RBP16.6■□□□□ 0.25
TPM3-205ENST00000328159 TSG101Q99816 390 aa16.6■□□□□ 0.25
TPM3-205ENST00000328159 KCNH7Q9NS40 1196 aa16.6■□□□□ 0.25
TPM3-205ENST00000328159 RIPK3Q9Y572 518 aa16.6■□□□□ 0.25
TPM3-205ENST00000328159 PCDHA2Q9Y5H9 948 aa16.6■□□□□ 0.25
TPM3-205ENST00000328159 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.6■□□□□ 0.251e-10■■■□□ 17.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms